Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 2.5e-38 162.5 154 100.0
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 9.5e-38 160.6 140 97.1
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 5.4e-17 91.7 135 79.3
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 3.0e-15 85.9 135 60.0
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 3.9e-15 85.5 134 72.4
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 8.7e-15 84.3 135 65.9
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 1.1e-14 84.0 144 68.8
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 2.5e-14 82.8 139 42.4
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 2.5e-14 82.8 128 77.3
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 3.3e-14 82.4 134 70.9
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 4.3e-14 82.0 131 71.0
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 4.3e-14 82.0 131 71.0
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 5.6e-14 81.6 134 64.2
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 5.6e-14 81.6 140 65.0
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 7.3e-14 81.3 135 74.8
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 1.6e-13 80.1 121 76.0
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 2.1e-13 79.7 135 63.7
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 2.1e-13 79.7 135 63.7
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.1e-13 79.7 134 68.7
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 2.1e-13 79.7 134 68.7
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 2.1e-13 79.7 135 71.1
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 2.1e-13 79.7 140 63.6
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 4.8e-13 78.6 145 71.0
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 6.2e-13 78.2 139 66.9
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 6.2e-13 78.2 140 72.1
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 8.1e-13 77.8 138 65.9
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.8e-12 76.6 55 78.2
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 3.1e-12 75.9 140 56.4
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 3.1e-12 75.9 148 67.6
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 6.9e-12 74.7 140 68.6
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 6.9e-12 74.7 133 72.2
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 6.9e-12 74.7 138 65.2
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 6.9e-12 74.7 136 66.9
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 9.0e-12 74.3 133 69.9
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 9.0e-12 74.3 141 57.4
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.2e-11 73.9 55 70.9
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 1.5e-11 73.6 124 71.8
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 2.0e-11 73.2 55 70.9
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 2.6e-11 72.8 134 65.7
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 2.6e-11 72.8 136 69.1
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 3.4e-11 72.4 55 70.9
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 4.5e-11 72.0 136 69.9
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 4.5e-11 72.0 145 36.6
TWI53G1176 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 5.8e-11 71.6 141 68.8
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 7.6e-11 71.2 124 70.2
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 7.6e-11 71.2 141 68.8
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 2.2e-10 69.7 137 64.2
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 2.9e-10 69.3 141 66.0
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 2.9e-10 69.3 133 60.9
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 4.9e-10 68.6 49 69.4
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 4.9e-10 68.6 138 69.6
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 6.4e-10 68.2 120 58.3
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 8.4e-10 67.8 134 67.9
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 8.4e-10 67.8 119 72.3
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 1.9e-09 66.6 144 67.4
Actinidia01465 Actinidia chinensis HOM05D006719 ORTHO05D007063 2.4e-09 66.2 64 62.5
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 2.4e-09 66.2 121 76.9
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 2.4e-09 66.2 107 69.2
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 3.2e-09 65.9 133 69.9
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 4.2e-09 65.5 128 71.1
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 9.3e-09 64.3 135 69.6
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 1.6e-08 63.5 117 75.2
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 2.1e-08 63.2 133 69.9
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 2.1e-08 63.2 135 68.1
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 3.5e-08 62.4 134 64.9
Sed0003703 Sechium edule HOM05D006719 ORTHO05D007063 4.6e-08 62.0 133 66.9
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 4.6e-08 62.0 141 66.7
Aqoxy2G03000 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 6.0e-08 61.6 55 61.8
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 1.0e-07 60.8 139 62.6
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 1.0e-07 60.8 141 67.4
Sp7g14160 Schrenkiella parvula HOM05D006719 ORTHO05D007063 1.3e-07 60.5 147 66.7
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 1.8e-07 60.1 125 63.2
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 2.3e-07 59.7 137 62.8
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 3.9e-07 58.9 132 69.7
MBI19_g42338_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 3.9e-07 58.9 168 47.6
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 5.1e-07 58.5 135 68.1
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 8.7e-07 57.8 137 63.5
SalBow2G1281 Salvia bowleyana HOM05D006719 ORTHO05D007063 8.7e-07 57.8 45 66.7
AT4G15790 Arabidopsis thaliana HOM05D006719 ORTHO05D007063 1.1e-06 57.4 56 60.7
MBI19_g20884_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 1.1e-06 57.4 159 55.3
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 1.1e-06 57.4 131 55.0
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.9e-06 56.6 55 58.2
Aqoxy5G00712 Aquilegia oxysepala HOM05D006719 ORTHO05D007063 4.3e-06 55.5 144 61.1
AL7G39510 Arabidopsis lyrata HOM05D006719 ORTHO05D007063 4.3e-06 55.5 51 60.8
CARHR290290 Cardamine hirsuta HOM05D006719 ORTHO05D007063 7.4e-06 54.7 116 72.4
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 7.4e-06 54.7 55 60.0


User provided reference genes

Program Settings