Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G7449 Papaver somniferum HOM05D003790 ORTHO05D004481 1.4e-103 379.8 218 100.0
PSO761G0583 Papaver somniferum HOM05D003790 ORTHO05D004481 2.3e-98 362.5 219 95.9
Aqoxy2G02808 Aquilegia oxysepala HOM05D003790 ORTHO05D004481 2.5e-47 193.0 188 56.9
Nn3g21628 Nelumbo nucifera HOM05D003790 ORTHO05D004481 7.9e-46 188.0 191 57.6
TAR633G0094 Trochodendron aralioides HOM05D003790 ORTHO05D004481 9.6e-44 181.0 183 55.2
CiPaw.07G114900 Carya illinoinensis HOM05D003790 ORTHO05D004481 2.4e-42 176.4 189 56.1
CiPaw.08G091700 Carya illinoinensis HOM05D003790 ORTHO05D004481 3.1e-42 176.0 192 56.8
TAR633G1354 Trochodendron aralioides HOM05D003790 ORTHO05D004481 4.1e-42 175.6 183 54.6
Duzib138G1652 Durio zibethinus HOM05D003790 ORTHO05D004481 7.2e-39 164.9 180 53.9
Manes.01G225600 Manihot esculenta HOM05D003790 ORTHO05D004481 1.6e-38 163.7 177 53.1
Cfa005842 Carpinus fangiana HOM05D003790 ORTHO05D004481 3.6e-38 162.5 183 52.5
Haze_05008 Corylus avellana HOM05D003790 ORTHO05D004481 4.6e-38 162.2 183 53.0
TPR.G7317 Trifolium pratense HOM05D003790 ORTHO05D004481 7.9e-38 161.4 187 49.7
Thecc.01G310000 Theobroma cacao HOM05D003790 ORTHO05D004481 1.0e-37 161.0 180 55.0
CANSAT25G2552 Cannabis sativa HOM05D003790 ORTHO05D004481 1.3e-37 160.6 193 51.3
PGSC0003DMG400037362 Solanum tuberosum HOM05D003790 ORTHO05D004481 3.9e-37 159.1 187 46.5
Actinidia21012 Actinidia chinensis HOM05D003790 ORTHO05D004481 1.9e-36 156.8 173 53.8
Actinidia25835 Actinidia chinensis HOM05D003270 ORTHO05D003662 4.3e-36 155.6 173 53.8
Ah.11g049420 Amaranthus hybridus HOM05D003790 ORTHO05D004481 4.3e-36 155.6 176 50.6
Potri.002G198800 Populus trichocarpa HOM05D003790 ORTHO05D004481 5.7e-36 155.2 190 51.6
Gohir.A07G127400 Gossypium hirsutum HOM05D003790 ORTHO05D004481 9.7e-36 154.5 187 49.2
Gohir.D07G131700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 9.7e-36 154.5 193 49.7
TAR362G0521 Trochodendron aralioides HOM05D003790 ORTHO05D004481 9.7e-36 154.5 188 51.6
CAN.G69.5 Capsicum annuum HOM05D003790 ORTHO05D004481 1.3e-35 154.1 190 47.4
Medtr1g087710 Medicago truncatula HOM05D003790 ORTHO05D004481 1.3e-35 154.1 182 52.2
Gorai.001G143000 Gossypium raimondii HOM05D003790 ORTHO05D004481 1.6e-35 153.7 193 49.7
Lalb_Chr06g0166611 Lupinus albus HOM05D003790 ORTHO05D004481 1.6e-35 153.7 189 46.6
Phvul.007G216200 Phaseolus vulgaris HOM05D003790 ORTHO05D004481 1.6e-35 153.7 195 50.3
Lalb_Chr02g0146651 Lupinus albus HOM05D003790 ORTHO05D004481 2.2e-35 153.3 189 50.3
VMungo0720G2360 Vigna mungo HOM05D003790 ORTHO05D004481 4.8e-35 152.1 184 50.5
Duzib133G0291 Durio zibethinus HOM05D003790 ORTHO05D004481 1.1e-34 151.0 179 52.5
THA.LOC104801296 Tarenaya hassleriana HOM05D003790 ORTHO05D004481 1.1e-34 151.0 184 50.0
Nitab4.5_0000116g0070 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.4e-34 150.6 192 49.0
PGSC0003DMG400009002 Solanum tuberosum HOM05D003790 ORTHO05D004481 2.4e-34 149.8 187 49.2
Ca_10301_v3 Cicer arietinum L. HOM05D003790 ORTHO05D004481 4.1e-34 149.1 185 50.3
Gorai.007G124700 Gossypium raimondii HOM05D003790 ORTHO05D004481 5.3e-34 148.7 187 49.7
Potri.014G123400 Populus trichocarpa HOM05D003790 ORTHO05D004481 6.9e-34 148.3 192 47.9
Nitab4.5_0025993g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.2e-33 147.5 198 47.5
Rhsim13G0006400 Rhododendron simsii HOM05D003790 ORTHO05D004481 1.5e-33 147.1 189 46.6
Gohir.D11G116500 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.0e-33 146.7 188 50.0
vmacro02415 Vaccinium macrocarpon HOM05D003790 ORTHO05D004481 4.5e-33 145.6 183 44.8
Oeu005872.1 Olea europaea HOM05D003790 ORTHO05D004481 5.9e-33 145.2 186 46.2
QL12p028945 Quercus lobata HOM05D003790 ORTHO05D004481 7.7e-33 144.8 182 51.1
Eucgr.H01068 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.0e-32 144.4 188 48.4
DCAR_018309 Daucus carota HOM05D003790 ORTHO05D004481 1.7e-32 143.7 180 49.4
Nitab4.5_0017359g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.7e-32 143.7 197 43.7
Peaxi162Scf00001g00262 Petunia axillaris HOM05D003790 ORTHO05D004481 1.7e-32 143.7 201 45.3
Rhsim01G0289200 Rhododendron simsii HOM05D003790 ORTHO05D004481 1.7e-32 143.7 193 45.1
Eucgr.L01709 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.2e-32 143.3 190 48.4
Carub.0001s0174 Capsella rubella HOM05D003790 ORTHO05D004481 2.9e-32 142.9 181 47.0
Ciclev10022416m.g Citrus clementina HOM05D003790 ORTHO05D004481 3.8e-32 142.5 190 47.4
Sopen01g031440 Solanum pennellii HOM05D003790 ORTHO05D004481 5.0e-32 142.1 190 43.7
Sabra14G0091700 Salix brachista HOM05D003790 ORTHO05D004481 6.5e-32 141.7 189 48.1
Glyma.02G014300 Glycine max HOM05D003790 ORTHO05D004481 8.5e-32 141.4 191 47.6
Peaxi162Scf00001g00254 Petunia axillaris HOM05D003790 ORTHO05D004481 1.1e-31 141.0 189 46.0
Gohir.A11G111300 Gossypium hirsutum HOM05D003790 ORTHO05D004481 1.4e-31 140.6 187 48.1
FvH4_5g39610 Fragaria vesca HOM05D003790 ORTHO05D004481 4.2e-31 139.0 194 46.4
FAN08G1995 Fragaria x ananassa HOM05D003790 ORTHO05D004481 4.2e-31 139.0 194 46.4
FAN18G0157 Fragaria x ananassa HOM05D003790 ORTHO05D004481 4.2e-31 139.0 194 46.4
Peaxi162Scf00001g00263 Petunia axillaris HOM05D003790 ORTHO05D004481 4.2e-31 139.0 192 45.3
FAN04G0217 Fragaria x ananassa HOM05D003790 ORTHO05D004481 5.5e-31 138.7 193 45.6
Lj2P1202T13 Lonicera japonica HOM05D003790 ORTHO05D004481 5.5e-31 138.7 187 47.1
Nitab4.5_0010548g0010 Nicotiana tabacum HOM05D003790 ORTHO05D004481 5.5e-31 138.7 190 46.8
Dinv10067 Davidia involucrata HOM05D003790 ORTHO05D004481 9.4e-31 137.9 191 44.5
FAN13G3073 Fragaria x ananassa HOM05D003790 ORTHO05D004481 9.4e-31 137.9 193 45.6
Glyma.10G015000 Glycine max HOM05D003790 ORTHO05D004481 1.2e-30 137.5 187 48.7
C05p01360 Brassica napus HOM05D003790 ORTHO05D004481 2.7e-30 136.3 180 46.7
Sp1g01670 Schrenkiella parvula HOM05D003790 ORTHO05D004481 2.7e-30 136.3 183 46.4
Sed0026960 Sechium edule HOM05D003790 ORTHO05D004481 2.7e-30 136.3 173 43.9
EL10As5g23497 Beta vulgaris HOM05D003790 ORTHO05D004481 3.6e-30 136.0 172 49.4
Solyc01g079660.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 4.6e-30 135.6 191 42.4
AT5G38700 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 7.9e-30 134.8 176 47.7
BolC5t28918H Brassica oleracea HOM05D003790 ORTHO05D004481 1.0e-29 134.4 180 46.7
Eucgr.L02691 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.0e-29 134.4 182 46.7
Eucgr.H01059 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.4e-29 134.0 188 46.3
PGR119G1194 Punica granatum HOM05D003790 ORTHO05D004481 1.4e-29 134.0 182 46.2
Sp6g02070 Schrenkiella parvula HOM05D003790 ORTHO05D004481 1.4e-29 134.0 181 44.2
AL1G12020 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 1.8e-29 133.7 179 48.6
BcaB03g15798 Brassica carinata HOM05D003790 ORTHO05D004481 2.3e-29 133.3 181 45.9
Eucgr.E02370 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.3e-29 133.3 182 46.2
Lj1C20T16 Lonicera japonica HOM05D003790 ORTHO05D004481 2.3e-29 133.3 176 47.2
A10p01380 Brassica napus HOM05D003790 ORTHO05D004481 3.9e-29 132.5 180 46.1
BraA10t42414Z Brassica rapa HOM05D003790 ORTHO05D004481 3.9e-29 132.5 180 46.1
Cc08_g11830 Coffea canephora HOM05D003790 ORTHO05D004481 5.1e-29 132.1 213 43.7
Sabra02G0159000 Salix brachista HOM05D003790 ORTHO05D004481 8.8e-29 131.3 188 45.7
Aa31LG5G1840 Aethionema arabicum HOM05D003790 ORTHO05D004481 1.1e-28 131.0 177 46.9
Cpa.g.sc18.4 Carica papaya HOM05D003790 ORTHO05D004481 1.1e-28 131.0 192 46.4
Thhalv10009571m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 1.1e-28 131.0 183 44.3
PGR119G2441 Punica granatum HOM05D003790 ORTHO05D004481 1.1e-28 131.0 182 45.6
Atru.chr5.1052 Acer truncatum HOM05D003790 ORTHO05D004481 1.5e-28 130.6 175 47.4
Lj1C20T6 Lonicera japonica HOM05D003790 ORTHO05D004481 1.5e-28 130.6 178 46.6
BolC3t16086H Brassica oleracea HOM05D003790 ORTHO05D004481 2.0e-28 130.2 182 44.5
Dinv33098 Davidia involucrata HOM05D003790 ORTHO05D004481 2.0e-28 130.2 209 45.5
Hma1.2p1_1302F.1_g274340 Hydrangea macrophylla HOM05D003790 ORTHO05D004481 2.0e-28 130.2 183 47.5
Oeu008329.1 Olea europaea HOM05D003790 ORTHO05D004481 2.6e-28 129.8 186 46.8
Thhalv10029373m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 4.4e-28 129.0 182 44.0
BcaC07g42307 Brassica carinata HOM05D003790 ORTHO05D004481 7.4e-28 128.3 182 46.7
BraA03t12296Z Brassica rapa HOM05D003790 ORTHO05D004481 7.4e-28 128.3 182 44.0
Sc17g0000570 Simmondsia chinensis HOM05D003790 ORTHO05D004481 7.4e-28 128.3 177 44.6
Prupe.8G269600 Prunus persica HOM05D003790 ORTHO05D004481 9.7e-28 127.9 181 42.5
BcaC01g06770 Brassica carinata HOM05D003790 ORTHO05D004481 1.7e-27 127.1 182 44.0
BcaC01g06771 Brassica carinata HOM05D003790 ORTHO05D004481 1.7e-27 127.1 182 44.0
C03p38000 Brassica napus HOM05D003790 ORTHO05D004481 1.7e-27 127.1 182 44.0
CARHR001970 Cardamine hirsuta HOM05D003790 ORTHO05D004481 1.7e-27 127.1 184 45.1
A03p31160 Brassica napus HOM05D003790 ORTHO05D004481 2.2e-27 126.7 182 44.0
Gohir.A12G126700 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.2e-27 126.7 179 46.9
BcaB01g02435 Brassica carinata HOM05D003790 ORTHO05D004481 2.8e-27 126.3 186 43.5
ClCG09G005270 Citrullus lanatus HOM05D003790 ORTHO05D004481 2.8e-27 126.3 179 42.5
Sopen01g031450 Solanum pennellii HOM05D003790 ORTHO05D004481 3.7e-27 125.9 181 44.2
TWI36G1341 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 3.7e-27 125.9 176 45.5
BcaC07g42401 Brassica carinata HOM05D003790 ORTHO05D004481 4.8e-27 125.6 180 44.4
CsaV3_7G029800 Cucumis sativus L. HOM05D003790 ORTHO05D004481 1.1e-26 124.4 172 43.0
Oeu005873.1 Olea europaea HOM05D003790 ORTHO05D004481 1.1e-26 124.4 170 47.1
RcHm_v2.0_Chr7g0241911 Rosa chinensis HOM05D003790 ORTHO05D004481 1.1e-26 124.4 185 42.7
Sed0014571 Sechium edule HOM05D003790 ORTHO05D004481 1.1e-26 124.4 168 44.0
A09p68580 Brassica napus HOM05D003790 ORTHO05D004481 1.4e-26 124.0 182 46.2
BraA09t42201Z Brassica rapa HOM05D003790 ORTHO05D004481 1.4e-26 124.0 182 46.2
AT4G02170 Arabidopsis thaliana HOM05D003790 ORTHO05D004481 1.8e-26 123.6 183 41.5
PGR119G2399 Punica granatum HOM05D003790 ORTHO05D004481 2.4e-26 123.2 167 45.5
Gorai.008G141400 Gossypium raimondii HOM05D003790 ORTHO05D004481 5.3e-26 122.1 176 46.6
AL6G50980 Arabidopsis lyrata HOM05D003790 ORTHO05D004481 9.1e-26 121.3 183 41.5
Solyc01g079670.2 Solanum lycopersicum HOM05D003790 ORTHO05D004481 2.0e-25 120.2 178 43.3
C08p53190 Brassica napus HOM05D003790 ORTHO05D004481 2.6e-25 119.8 180 45.0
BolC8t52834H Brassica oleracea HOM05D003790 ORTHO05D004481 2.6e-25 119.8 180 45.0
Eucgr.H01065 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.6e-25 119.8 182 42.9
MELO3C015941.2 Cucumis melo HOM05D003790 ORTHO05D004481 3.4e-25 119.4 172 41.9
HanXRQChr05g0137341 Helianthus annuus HOM05D003790 ORTHO05D004481 5.9e-25 118.6 180 44.4
SGA_v2.0_scaffold198G41126 Striga asiatica HOM05D003790 ORTHO05D004481 5.9e-25 118.6 184 45.7
Nitab4.5_0000116g0080 Nicotiana tabacum HOM05D003790 ORTHO05D004481 1.3e-24 117.5 180 41.7
Lsat_1_v5_gn_9_541 Lactuca sativa HOM05D003790 ORTHO05D004481 1.7e-24 117.1 185 45.9
HanXRQChr05g0137351 Helianthus annuus HOM05D003790 ORTHO05D004481 3.8e-24 115.9 179 42.5
ECA248G3170 Erigeron canadensis HOM05D003790 ORTHO05D004481 5.0e-24 115.5 175 43.4
SalBow2G3380 Salvia bowleyana HOM05D003790 ORTHO05D004481 8.5e-24 114.8 182 41.8
Eucgr.K03524 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.1e-23 114.4 189 41.3
Carub.0006s3500 Capsella rubella HOM05D003790 ORTHO05D004481 1.9e-23 113.6 193 39.4
Eucgr.L01710 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.9e-23 113.6 184 41.8
HPP92_025189 Vanilla planifolia HOM05D003790 ORTHO05D004481 5.5e-23 112.1 175 38.9
COL.COLO4_23265 Corchorus olitorius HOM05D003790 ORTHO05D004481 9.4e-23 111.3 164 45.7
HanXRQChr01g0000871 Helianthus annuus HOM05D003790 ORTHO05D004481 1.2e-22 110.9 176 45.5
Eucgr.H01062 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.6e-22 109.4 171 45.0
TWI75G0985 Tripterygium wilfordii HOM05D003790 ORTHO05D004481 1.4e-21 107.5 170 43.5
Migut.D00101 Erythranthe guttata HOM05D003790 ORTHO05D004481 2.3e-21 106.7 180 38.9
MD11G1317200 Malus domestica HOM05D003790 ORTHO05D004481 3.0e-21 106.3 214 37.9
AUR62011841 Chenopodium quinoa HOM05D003790 ORTHO05D004481 3.7e-19 99.4 171 41.5
Duzib264G0610 Durio zibethinus HOM05D003790 ORTHO05D004481 6.3e-19 98.6 173 41.0
Eucgr.L01711 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.3e-19 98.6 159 40.3
Oeu008453.1 Olea europaea HOM05D003688 ORTHO05D004481 2.4e-18 96.7 165 42.4
Os03g0302800 Oryza sativa ssp. japonica HOM05D003790 ORTHO05D004481 2.4e-18 96.7 200 36.0
AUR62024684 Chenopodium quinoa HOM05D003790 ORTHO05D004481 9.1e-18 94.7 176 39.8
Zm00001eb014210 Zea mays HOM05D003790 ORTHO05D004481 2.0e-17 93.6 206 35.0
Eucgr.K03525 Eucalyptus grandis HOM05D003790 ORTHO05D004481 3.5e-17 92.8 175 36.6
MD03G1297400 Malus domestica HOM05D003790 ORTHO05D004481 4.5e-17 92.4 215 34.0
ATR0706G232 Amborella trichopoda HOM05D003790 ORTHO05D004481 1.3e-16 90.9 180 35.6
CARHR250350 Cardamine hirsuta HOM05D003790 ORTHO05D004481 1.3e-16 90.9 126 45.2
Gohir.D12G130100 Gossypium hirsutum HOM05D003790 ORTHO05D004481 2.2e-16 90.1 151 41.7
Thecc.01G102100 Theobroma cacao HOM05D003790 ORTHO05D004481 8.5e-16 88.2 173 39.3
COL.COLO4_09960 Corchorus olitorius HOM05D003790 ORTHO05D004481 4.2e-15 85.9 173 39.3
Actinidia21418 Actinidia chinensis HOM05D003790 ORTHO05D004481 7.2e-15 85.1 281 29.9
Nn6g33912 Nelumbo nucifera HOM05D003790 ORTHO05D004481 1.2e-14 84.3 90 51.1
Duzib147G1191 Durio zibethinus HOM05D003790 ORTHO05D004481 2.7e-14 83.2 172 37.8
Thhalv10029363m.g Eutrema salsugineum HOM05D003790 ORTHO05D004481 2.7e-14 83.2 149 41.6
Eucgr.L02503 Eucalyptus grandis HOM05D003790 ORTHO05D004481 8.0e-14 81.6 179 37.4
HPP92_006897 Vanilla planifolia HOM05D003790 ORTHO05D004481 5.2e-13 79.0 136 38.2
Zm00001eb396420 Zea mays HOM05D003790 ORTHO05D004481 5.2e-13 79.0 209 32.5
SEGI_22681 Sequoiadendron giganteum HOM05D001131 ORTHO05D000972 3.1e-10 69.7 195 30.8
Eucgr.F04057 Eucalyptus grandis HOM05D003790 ORTHO05D004481 7.7e-09 65.1 105 37.1
Aqoxy5G02997 Aquilegia oxysepala HOM05D001131 ORTHO05D000972 1.0e-08 64.7 190 27.9
Eucgr.E02488 Eucalyptus grandis HOM05D003790 ORTHO05D004481 1.7e-08 63.9 104 36.5
Eucgr.A02768 Eucalyptus grandis HOM05D003790 ORTHO05D004481 2.9e-08 63.2 102 39.2
Eucgr.L00541 Eucalyptus grandis HOM05D003790 ORTHO05D004481 6.5e-08 62.0 97 38.1
HPP92_011875 Vanilla planifolia HOM05D003790 ORTHO05D004481 1.1e-07 61.2 166 33.1
SGA_v2.0_scaffold334G49053 Striga asiatica HOM05D003790 ORTHO05D004481 1.9e-07 60.5 123 35.8
Sc17g0000580 Simmondsia chinensis HOM05D003790 ORTHO05D004481 5.5e-07 58.9 140 30.7
Eucgr.F04083 Eucalyptus grandis HOM05D003790 ORTHO05D004481 9.4e-07 58.2 97 36.1
QL02p068251 Quercus lobata HOM05D001131 ORTHO05D000972 3.6e-06 56.2 214 26.2
TAR629G3365 Trochodendron aralioides HOM05D001131 ORTHO05D000972 3.6e-06 56.2 187 27.3
Sed0004223 Sechium edule HOM05D001131 ORTHO05D000972 4.7e-06 55.8 188 28.2
MELO3C017926.2 Cucumis melo HOM05D003790 ORTHO05D044967 6.1e-06 55.5 163 28.2
Aqoxy3G01772 Aquilegia oxysepala HOM05D001131 ORTHO05D000972 8.0e-06 55.1 200 28.0
TAR371G0961 Trochodendron aralioides HOM05D001131 ORTHO05D000972 8.0e-06 55.1 198 29.8


User provided reference genes

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