Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G7354 Papaver somniferum HOM05D006132 ORTHO05D007305 0.0e+00 3976.4 2021 100.0
PSO210G2191 Papaver somniferum HOM05D006132 ORTHO05D007305 0.0e+00 3700.2 2023 93.5
Nn8g39007 Nelumbo nucifera HOM05D006132 ORTHO05D007305 0.0e+00 2526.9 2071 65.7
TAR636G1718 Trochodendron aralioides HOM05D006132 ORTHO05D007305 0.0e+00 2519.2 2076 65.4
Aqoxy7G03955 Aquilegia oxysepala HOM05D006132 ORTHO05D007305 0.0e+00 2358.9 2065 63.0
MBI01_g01249_MAGBIO Magnolia biondii HOM05D006132 ORTHO05D007305 0.0e+00 2281.5 2057 60.7
Dinv23402 Davidia involucrata HOM05D006132 ORTHO05D007305 0.0e+00 2263.0 2024 61.3
GSVIVG01035326001 Vitis vinifera HOM05D006132 ORTHO05D007305 0.0e+00 2224.5 2044 60.0
QL12p040855 Quercus lobata HOM05D006132 ORTHO05D007305 0.0e+00 2219.5 2063 58.9
CiPaw.07G201400 Carya illinoinensis HOM05D006132 ORTHO05D007305 0.0e+00 2215.3 2064 58.6
Haze_01967 Corylus avellana HOM05D006132 ORTHO05D007305 0.0e+00 2181.8 2080 58.7
Thecc.09G049200 Theobroma cacao HOM05D006132 ORTHO05D007305 0.0e+00 2164.0 2055 57.7
Lj8C561G12 Lonicera japonica HOM05D006132 ORTHO05D007305 0.0e+00 2144.8 1969 58.6
Ciclev10010526m.g Citrus clementina HOM05D006132 ORTHO05D007305 0.0e+00 2144.4 2059 57.9
Prupe.1G443500 Prunus persica HOM05D006132 ORTHO05D007305 0.0e+00 2136.7 1976 59.0
Atru.chr7.2044 Acer truncatum HOM05D006132 ORTHO05D007305 0.0e+00 2135.5 2062 57.5
Potri.018G057900 Populus trichocarpa HOM05D006132 ORTHO05D007305 0.0e+00 2129.4 2041 58.1
vmacro00180 Vaccinium macrocarpon HOM05D006132 ORTHO05D007305 0.0e+00 2127.4 2099 57.0
Dinv02537 Davidia involucrata HOM05D006132 ORTHO05D007305 0.0e+00 2124.0 1951 60.2
RcHm_v2.0_Chr6g0306811 Rosa chinensis HOM05D006132 ORTHO05D007305 0.0e+00 2124.0 2068 57.3
FvH4_2g35140 Fragaria vesca HOM05D006132 ORTHO05D007305 0.0e+00 2121.3 2050 57.5
COL.COLO4_21010 Corchorus olitorius HOM05D006132 ORTHO05D007305 0.0e+00 2117.8 2043 57.3
Manes.03G057600 Manihot esculenta HOM05D006132 ORTHO05D007305 0.0e+00 2114.3 2053 56.6
Gorai.001G024600 Gossypium raimondii HOM05D006132 ORTHO05D007305 0.0e+00 2107.0 2058 56.6
MD08G1108900 Malus domestica HOM05D006132 ORTHO05D007305 0.0e+00 2106.6 2078 56.3
Duzib168G1248 Durio zibethinus HOM05D006132 ORTHO05D007305 0.0e+00 2075.8 2066 56.1
TWI34G0160 Tripterygium wilfordii HOM05D006132 ORTHO05D007305 0.0e+00 2041.9 2037 56.3
Sc09g0009530 Simmondsia chinensis HOM05D006132 ORTHO05D007305 0.0e+00 2039.6 2027 56.3
MELO3C003478.2 Cucumis melo HOM05D006132 ORTHO05D007305 0.0e+00 2034.2 2030 55.2
Lj1g0008631 Lotus japonicus HOM05D006132 ORTHO05D007305 0.0e+00 2033.5 2062 54.9
Sed0028022 Sechium edule HOM05D006132 ORTHO05D007305 0.0e+00 2031.5 2062 55.0
Gohir.D07G023900 Gossypium hirsutum HOM05D006132 ORTHO05D007305 0.0e+00 2030.8 1961 57.2
MSTRG.25925 Avicennia marina HOM05D006132 ORTHO05D007305 0.0e+00 2030.0 2047 55.3
Cc08_g10020 Coffea canephora HOM05D006132 ORTHO05D007305 0.0e+00 2028.4 2057 55.0
CsaV3_3G048410 Cucumis sativus L. HOM05D006132 ORTHO05D007305 0.0e+00 2026.9 2054 54.8
Ca_15565_v3 Cicer arietinum L. HOM05D006132 ORTHO05D007305 0.0e+00 2026.5 2015 55.2
Medtr3g110417 Medicago truncatula HOM05D006132 ORTHO05D007305 0.0e+00 2015.0 1987 55.7
Migut.A00170 Erythranthe guttata HOM05D006132 ORTHO05D007305 0.0e+00 2006.9 2049 55.0
Lalb_Chr08g0242871 Lupinus albus HOM05D006132 ORTHO05D007305 0.0e+00 2004.6 2036 54.6
Glyma.04G087200 Glycine max HOM05D006132 ORTHO05D007305 0.0e+00 2003.4 2047 54.5
Psat0s3156g0040 Pisum sativum HOM05D006132 ORTHO05D007305 0.0e+00 2001.5 2034 55.0
Glyma.06G088900 Glycine max HOM05D006132 ORTHO05D007305 0.0e+00 1998.4 2055 54.6
VMungo1309G3161 Vigna mungo HOM05D006132 ORTHO05D007305 0.0e+00 1986.1 2050 53.9
ClCG11G015000 Citrullus lanatus HOM05D006132 ORTHO05D007305 0.0e+00 1975.3 2067 53.7
TPR.G12374 Trifolium pratense HOM05D006132 ORTHO05D007305 0.0e+00 1974.5 1972 55.3
Phvul.009G112700 Phaseolus vulgaris HOM05D006132 ORTHO05D007305 0.0e+00 1969.1 2046 54.0
PGR031G1631 Punica granatum HOM05D006132 ORTHO05D007305 0.0e+00 1968.0 2039 54.5
Sopen08g019670 Solanum pennellii HOM05D006132 ORTHO05D007305 0.0e+00 1964.5 2048 53.5
AUR62040212 Chenopodium quinoa HOM05D006132 ORTHO05D007305 0.0e+00 1943.3 2028 53.4
CAN.G9.6 Capsicum annuum HOM05D006132 ORTHO05D007305 0.0e+00 1917.9 2052 52.5
arahy.Tifrunner.gnm1.ann1.GM174E Arachis hypogaea HOM05D006132 ORTHO05D007305 0.0e+00 1917.5 2196 51.0
AUR62009214 Chenopodium quinoa HOM05D006132 ORTHO05D007305 0.0e+00 1913.3 2044 52.9
HanXRQChr03g0077991 Helianthus annuus HOM05D006132 ORTHO05D007305 0.0e+00 1910.2 2034 52.9
DCAR_007699 Daucus carota HOM05D006132 ORTHO05D007305 0.0e+00 1904.0 2009 53.6
Lsat_1_v5_gn_3_109020 Lactuca sativa HOM05D006132 ORTHO05D007305 0.0e+00 1902.9 2048 52.2
Sp7g30590 Schrenkiella parvula HOM05D006132 ORTHO05D007305 0.0e+00 1902.1 1955 53.4
Gohir.A07G022180 Gossypium hirsutum HOM05D006132 ORTHO05D007305 0.0e+00 1892.5 1926 55.0
ATR0815G026 Amborella trichopoda HOM05D006132 ORTHO05D007305 0.0e+00 1891.7 2156 49.9
ECA240G1625 Erigeron canadensis HOM05D006132 ORTHO05D007305 0.0e+00 1890.9 1967 54.0
SalBow4G1475 Salvia bowleyana HOM05D006132 ORTHO05D007305 0.0e+00 1890.9 2045 52.0
Ah.11g044450 Amaranthus hybridus HOM05D006132 ORTHO05D007305 0.0e+00 1890.2 2032 51.8
Carub.0007s0767 Capsella rubella HOM05D006132 ORTHO05D007305 0.0e+00 1884.4 1956 53.5
AL7G18910 Arabidopsis lyrata HOM05D006132 ORTHO05D007305 0.0e+00 1879.8 1942 53.6
THA.LOC104818581 Tarenaya hassleriana HOM05D006132 ORTHO05D007305 0.0e+00 1879.8 2047 53.4
AT4G32820 Arabidopsis thaliana HOM05D006132 ORTHO05D007305 0.0e+00 1874.4 1943 53.5
Oeu038827.1 Olea europaea HOM05D006132 ORTHO05D007305 0.0e+00 1872.4 2046 52.6
arahy.Tifrunner.gnm1.ann1.XPLI6K Arachis hypogaea HOM05D006132 ORTHO05D007305 0.0e+00 1866.3 2032 52.8
EL10Ac2g03960 Beta vulgaris HOM05D006132 ORTHO05D007305 0.0e+00 1866.3 2164 49.3
Rhsim11G0049000 Rhododendron simsii HOM05D006132 ORTHO05D007305 0.0e+00 1856.6 1983 53.8
Thhalv10026823m.g Eutrema salsugineum HOM05D006132 ORTHO05D007305 0.0e+00 1854.0 1948 53.0
BcaC09g52078 Brassica carinata HOM05D006132 ORTHO05D007305 0.0e+00 1853.6 1950 53.0
C01p06070 Brassica napus HOM05D006132 ORTHO05D007305 0.0e+00 1852.8 1951 52.8
Hund19486 Selenicereus undatus HOM05D006132 ORTHO05D007305 0.0e+00 1850.9 2026 52.3
A01p05470 Brassica napus HOM05D006132 ORTHO05D007305 0.0e+00 1850.5 1948 52.6
BraA01t00520Z Brassica rapa HOM05D006132 ORTHO05D007305 0.0e+00 1833.5 1981 51.7
Nitab4.5_0000318g0080 Nicotiana tabacum HOM05D006132 ORTHO05D007305 0.0e+00 1823.9 1988 51.8
BolC1t00600H Brassica oleracea HOM05D006132 ORTHO05D007305 0.0e+00 1822.8 1981 51.9
Aa31LG5G17300 Aethionema arabicum HOM05D006132 ORTHO05D007305 0.0e+00 1818.9 1983 51.4
SGA_v2.0_scaffold103G30057 Striga asiatica HOM05D006132 ORTHO05D007305 0.0e+00 1817.7 2060 51.3
Aa31sc208G40 Aethionema arabicum HOM05D006132 ORTHO05D007305 0.0e+00 1812.3 1942 51.9
Eucgr.C00619 Eucalyptus grandis HOM05D006132 ORTHO05D007305 0.0e+00 1797.3 1930 52.4
Actinidia01213 Actinidia chinensis HOM05D006132 ORTHO05D007305 0.0e+00 1727.6 1969 51.7
HPP92_019594 Vanilla planifolia HOM05D006132 ORTHO05D007305 0.0e+00 1587.4 1787 50.3
Solyc08g066010.2 Solanum lycopersicum HOM05D006132 ORTHO05D007305 0.0e+00 1541.6 1604 53.9
Cpa.g.sc7.235 Carica papaya HOM05D006132 ORTHO05D007305 0.0e+00 1465.7 1613 51.5
unitig_0.g2566 Utricularia gibba HOM05D006132 ORTHO05D007305 0.0e+00 1406.7 2004 43.4
FAN20G0110 Fragaria x ananassa HOM05D006132 ORTHO05D007305 0.0e+00 1355.9 1405 55.8
CSS0000087 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 0.0e+00 1295.4 1096 62.8
Pp3c4_1880 Physcomitrium patens HOM05D006132 ORTHO05D007305 0.0e+00 1273.1 2186 38.9
Mapoly0021s0014 Marchantia polymorpha HOM05D006132 ORTHO05D007305 0.0e+00 1224.2 2185 38.2
SMO365G0056 Selaginella moellendorffii HOM05D006132 ORTHO05D007305 0.0e+00 1209.9 1980 39.1
AagrBONN_evm.TU.Sc2ySwM_344.875 Anthoceros agrestis HOM05D006132 ORTHO05D007305 0.0e+00 1087.0 2189 35.4
CSS0048337 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 1.3e-272 944.5 799 63.1
CARHR240810 Cardamine hirsuta HOM05D006132 ORTHO05D007305 2.6e-236 823.9 713 60.9
CBR_g22939 Chara braunii HOM05D006132 ORTHO05D000048 2.3e-232 810.8 2092 30.8
Peaxi162Scf00840g00429 Petunia axillaris HOM05D006132 ORTHO05D007305 2.9e-227 793.9 788 54.6
Nitab4.5_0002021g0060 Nicotiana tabacum HOM05D006132 ORTHO05D007305 3.0e-224 783.9 1431 38.3
CSS0029204 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 5.0e-219 766.5 792 55.2
SHI18807 Sapria himalayana HOM05D006132 ORTHO05D007305 2.0e-215 754.6 1143 40.2
Psat4g077080 Pisum sativum HOM05D006132 ORTHO05D007305 5.2e-176 623.6 752 48.1
Psat4g077000 Pisum sativum HOM05D006132 ORTHO05D007305 3.4e-167 594.3 719 48.5
SHI18802 Sapria himalayana HOM05D006132 ORTHO05D007305 8.4e-158 563.1 853 44.1
Solyc08g066000.2 Solanum lycopersicum HOM05D006132 ORTHO05D007305 1.7e-118 432.6 458 51.7
Peaxi162Scf00840g00428 Petunia axillaris HOM05D006132 ORTHO05D007305 6.7e-115 420.6 361 58.7
TAR636G0297 Trochodendron aralioides HOM05D006132 ORTHO05D007305 3.5e-95 355.1 494 45.7
TAR636G2276 Trochodendron aralioides HOM05D006132 ORTHO05D007305 7.5e-90 337.4 268 66.0
Zm00001eb053280 Zea mays HOM05D006132 ORTHO05D007305 1.6e-68 266.5 357 44.8
Psat2g119040 Pisum sativum HOM05D006132 ORTHO05D007305 6.8e-67 261.2 223 60.1
CSS0021543 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 5.4e-64 251.5 218 59.2
Lsat_1_v5_gn_0_25341 Lactuca sativa HOM05D006132 ORTHO05D007305 5.6e-61 241.5 266 48.5
Cpa.g.sc7.234 Carica papaya HOM05D006132 ORTHO05D007305 1.7e-54 219.9 124 84.7
SHI18803 Sapria himalayana HOM05D006132 ORTHO05D007305 4.6e-47 195.3 287 42.9
Zm00001eb053310 Zea mays HOM05D006132 ORTHO05D007305 1.7e-38 166.8 291 41.6
MBI04_g05153_MAGBIO Magnolia biondii HOM05D006132 ORTHO05D007305 2.8e-36 159.5 128 63.3
Carub.0003s0455 Capsella rubella HOM05D006132 ORTHO05D007305 4.8e-36 158.7 227 42.3
Zm00001eb053300 Zea mays HOM05D006132 ORTHO05D007305 1.4e-32 147.1 134 57.5
Glyma.18G112500 Glycine max HOM05D006132 ORTHO05D007305 2.3e-30 139.8 80 86.2
MCO10G298 Micromonas commoda HOM05D006132 ORTHO05D007305 5.1e-22 112.1 420 25.0
Os03g0685750 Oryza sativa ssp. japonica HOM05D006132 ORTHO05D007305 2.5e-21 109.8 197 38.6
CDE12G0288 Ceratophyllum demersum HOM05D004517 ORTHO05D005366 3.4e-18 99.4 74 71.6
MBI04_g44310_MAGBIO Magnolia biondii HOM05D006132 ORTHO05D007305 3.2e-16 92.8 75 61.3
Zm00001eb053290 Zea mays HOM05D006132 ORTHO05D007305 5.5e-16 92.0 68 66.2
CiPaw.04G074200 Carya illinoinensis HOM05D006132 ORTHO05D007305 2.3e-14 86.7 61 63.9
Sabra06G0183100 Salix brachista HOM05D006132 ORTHO05D007305 3.1e-11 76.3 99 48.5
Glyma.11G174000 Glycine max HOM05D006132 ORTHO05D007305 1.7e-09 70.5 72 47.2
Phvul.003G090001 Phaseolus vulgaris HOM05D006132 ORTHO05D007305 4.2e-08 65.9 119 36.1
SMO351G0355 Selaginella moellendorffii HOM05D023170 ORTHO05D007305 4.6e-07 62.4 71 52.1


User provided reference genes

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