Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-267 926.0 462 100.0
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-246 855.9 463 92.9
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 1.3e-186 656.8 442 76.0
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 6.5e-183 644.4 445 75.3
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 3.2e-182 642.1 448 76.3
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 5.5e-182 641.3 443 75.8
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 5.5e-182 641.3 447 74.3
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 4.7e-181 638.3 440 75.0
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 1.3e-178 630.2 435 73.6
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 1.8e-177 626.3 442 75.3
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 5.4e-177 624.8 443 75.4
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 1.6e-176 623.2 437 73.5
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.4e-169 599.4 439 68.8
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 7.3e-166 587.8 453 65.1
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 1.8e-164 583.2 445 70.1
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 8.3e-162 574.3 443 64.3
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-161 573.9 440 68.0
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 1.4e-161 573.5 433 65.8
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 4.1e-161 572.0 450 63.6
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 2.7e-160 569.3 452 64.6
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 3.0e-159 565.8 434 65.7
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 5.6e-158 561.6 448 63.4
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 1.6e-157 560.1 352 75.0
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.2e-155 553.9 445 61.8
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 3.4e-155 552.4 433 63.5
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.3e-154 550.4 433 65.1
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 2.2e-154 549.7 439 61.3
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 1.4e-153 547.0 433 64.0
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 2.4e-153 546.2 440 62.5
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 2.0e-152 543.1 444 61.9
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 4.6e-152 542.0 432 61.8
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 4.6e-152 542.0 446 62.1
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 4.6e-152 542.0 439 62.6
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 1.0e-151 540.8 455 61.3
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 2.3e-151 539.7 446 61.7
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 1.5e-150 537.0 446 61.4
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.9e-150 536.6 440 61.6
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 1.9e-150 536.6 452 60.4
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 3.3e-150 535.8 449 61.7
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 5.6e-150 535.0 453 60.7
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 7.3e-150 534.6 451 62.1
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 1.2e-149 533.9 453 59.6
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 1.6e-149 533.5 438 59.6
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 8.1e-149 531.2 440 60.9
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 8.1e-149 531.2 439 59.5
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 8.1e-149 531.2 436 60.3
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.4e-148 530.4 435 62.3
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 5.2e-148 528.5 440 60.5
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 1.5e-147 526.9 455 58.5
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 2.6e-147 526.2 430 62.1
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 2.6e-147 526.2 442 59.7
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 3.4e-147 525.8 429 59.7
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 5.8e-147 525.0 432 60.2
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 9.8e-147 524.2 449 58.8
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 1.3e-146 523.9 453 58.7
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 2.9e-146 522.7 433 60.3
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 4.9e-146 521.9 451 59.4
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 4.9e-146 521.9 433 61.2
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 6.4e-146 521.5 433 60.3
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 1.1e-145 520.8 452 56.2
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 1.4e-145 520.4 457 58.0
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 1.9e-145 520.0 433 60.0
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.4e-145 519.6 344 70.1
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 2.4e-145 519.6 455 58.0
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 3.2e-145 519.2 446 58.7
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 3.2e-145 519.2 446 58.7
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 3.2e-145 519.2 446 58.7
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 3.2e-145 519.2 379 65.7
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 3.2e-145 519.2 422 61.4
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 3.2e-145 519.2 439 59.7
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 4.1e-145 518.8 434 59.4
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 4.1e-145 518.8 451 57.6
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 4.1e-145 518.8 442 58.6
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 5.4e-145 518.5 434 59.2
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 1.6e-144 516.9 443 59.6
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 3.5e-144 515.8 443 59.4
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 6.0e-144 515.0 442 58.4
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 1.0e-143 514.2 453 57.2
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 5.1e-143 511.9 436 59.2
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 6.6e-143 511.5 432 59.5
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 6.6e-143 511.5 439 59.0
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 1.9e-142 510.0 428 58.2
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 3.3e-142 509.2 429 58.7
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 5.6e-142 508.4 355 65.6
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 7.3e-142 508.1 428 60.3
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 3.6e-141 505.8 435 58.6
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 3.6e-141 505.8 435 58.6
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 3.6e-141 505.8 435 58.6
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 3.6e-141 505.8 440 58.9
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 4.7e-141 505.4 429 59.0
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 1.4e-140 503.8 461 56.8
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 1.4e-140 503.8 443 58.2
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 4.0e-140 502.3 461 56.6
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 5.2e-140 501.9 435 58.2
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 8.9e-140 501.1 427 57.1
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 8.9e-140 501.1 454 55.9
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.2e-139 500.7 436 58.3
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 1.5e-139 500.4 453 57.6
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 1.5e-139 500.4 451 56.5
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 1.5e-139 500.4 434 58.1
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.5e-139 500.4 352 65.9
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 1.5e-139 500.4 438 57.5
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 2.6e-139 499.6 347 67.1
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 2.6e-139 499.6 436 58.3
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 3.4e-139 499.2 343 66.8
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 9.9e-139 497.7 438 58.2
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.3e-138 497.3 438 58.4
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 1.3e-138 497.3 351 64.4
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 3.8e-138 495.7 450 57.1
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 8.4e-138 494.6 401 60.1
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 1.1e-137 494.2 436 57.1
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 1.1e-137 494.2 365 62.7
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 2.4e-137 493.0 438 56.8
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 4.1e-137 492.3 433 56.8
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 4.1e-137 492.3 343 65.3
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 5.4e-137 491.9 352 65.1
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 3.9e-135 485.7 408 60.5
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 3.9e-135 485.7 470 54.5
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 6.6e-135 485.0 438 57.3
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 1.5e-134 483.8 373 61.9
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 2.8e-133 479.6 445 55.5
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.1e-132 477.6 436 55.7
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 2.4e-132 476.5 435 57.0
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 5.2e-132 475.3 379 61.2
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 2.6e-131 473.0 439 55.1
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 9.3e-129 464.5 447 55.5
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 7.8e-128 461.5 334 62.9
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.7e-127 460.3 457 54.0
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 2.5e-126 456.4 352 60.8
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 2.5e-126 456.4 459 53.6
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 8.1e-125 451.4 323 68.1
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 1.4e-124 450.7 402 56.0
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.1e-124 449.5 437 52.2
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 5.3e-124 448.7 348 61.2
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.2e-123 447.6 358 59.8
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 4.6e-120 435.6 290 65.2
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 8.4e-114 414.8 342 57.3
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.2e-112 411.0 339 55.5
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.6e-112 410.6 342 57.0
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.1e-112 410.2 340 55.0
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 6.7e-111 405.2 250 73.2
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.1e-110 404.4 299 63.9
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 1.9e-105 387.1 460 47.8
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 2.7e-104 383.3 252 66.7
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 9.6e-102 374.8 313 57.5
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 5.5e-97 359.0 338 49.7
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 2.7e-96 356.7 382 45.8
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 6.7e-95 352.1 240 65.8
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 8.7e-95 351.7 372 47.0
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.5e-94 350.1 397 46.9
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 4.3e-94 349.4 340 49.1
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 3.7e-93 346.3 339 50.7
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 2.6e-91 340.1 341 49.3
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 7.7e-91 338.6 241 63.1
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 6.5e-90 335.5 382 44.8
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 2.1e-88 330.5 294 60.2
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.8e-85 320.1 348 47.7
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 2.8e-85 320.1 391 44.8
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 1.1e-84 318.2 236 60.2
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 1.0e-82 311.6 236 59.3
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 8.2e-77 292.0 356 42.4
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.8e-76 290.8 348 42.2
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.4e-76 290.4 344 43.6
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 3.1e-76 290.0 320 46.6
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.0e-71 275.0 343 41.4
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.8e-71 274.2 341 41.3
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.5e-70 271.2 427 37.9
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 3.3e-70 270.0 241 49.8
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 7.2e-65 252.3 344 37.8
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 1.2e-56 224.9 363 35.3
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 4.1e-44 183.3 149 61.1
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 2.3e-39 167.5 464 29.1
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 3.3e-33 147.1 153 50.3
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.2e-20 104.0 133 37.6
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.6e-19 101.7 81 50.6
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.9e-17 94.7 119 40.3
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 9.6e-17 92.4 131 48.9
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 1.2e-16 92.0 87 47.1
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.3e-13 82.0 100 36.0
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.3e-10 72.0 88 44.3
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.6e-08 65.1 36 80.6


User provided reference genes

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