Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G7184 Papaver somniferum HOM05D006603 ORTHO05D007786 3.1e-73 278.5 153 100.0
PSO210G0805 Papaver somniferum HOM05D006603 ORTHO05D007786 7.2e-70 267.3 153 97.4
TAR633G2131 Trochodendron aralioides HOM05D006603 ORTHO05D007786 2.0e-40 169.5 150 66.0
Aqoxy2G03755 Aquilegia oxysepala HOM05D006603 ORTHO05D007786 3.5e-40 168.7 149 65.1
Actinidia39936 Actinidia chinensis HOM05D006603 ORTHO05D007786 1.0e-39 167.2 145 65.5
MBI10_g39247_MAGBIO Magnolia biondii HOM05D006603 ORTHO05D007786 1.0e-39 167.2 145 64.8
Actinidia11378 Actinidia chinensis HOM05D006603 ORTHO05D007786 1.7e-39 166.4 146 65.8
Dinv29792 Davidia involucrata HOM05D006603 ORTHO05D007786 1.5e-38 163.3 148 62.8
CSS0001604 Camellia sinensis var. sinensis HOM05D006603 ORTHO05D007786 9.5e-38 160.6 144 62.5
CiPaw.01G176600 Carya illinoinensis HOM05D006603 ORTHO05D007786 1.8e-36 156.4 146 62.3
vmacro15486 Vaccinium macrocarpon HOM05D006603 ORTHO05D007786 1.3e-34 150.2 167 57.5
EL10Ac3g06681 Beta vulgaris HOM05D006603 ORTHO05D007786 1.7e-34 149.8 145 59.3
Manes.03G157300 Manihot esculenta HOM05D006603 ORTHO05D007786 3.7e-34 148.7 146 63.0
Ca_25848_v3 Cicer arietinum L. HOM05D006603 ORTHO05D007786 1.8e-33 146.4 149 60.4
Medtr1g045660 Medicago truncatula HOM05D006603 ORTHO05D007786 1.8e-33 146.4 146 59.6
Psat6g018400 Pisum sativum HOM05D006603 ORTHO05D007786 5.4e-33 144.8 145 60.7
Sc25g0004840 Simmondsia chinensis HOM05D006603 ORTHO05D007786 7.0e-33 144.4 144 56.9
Hma1.2p1_0112F.1_g054890 Hydrangea macrophylla HOM05D006603 ORTHO05D007786 9.2e-33 144.1 143 57.3
Ciclev10006126m.g Citrus clementina HOM05D006603 ORTHO05D007786 1.6e-32 143.3 148 58.8
ATR0787G168 Amborella trichopoda HOM05D006603 ORTHO05D007786 2.0e-32 142.9 145 60.7
Eucgr.H02902 Eucalyptus grandis HOM05D006603 ORTHO05D007786 5.9e-32 141.4 141 57.4
GSVIVG01027941001 Vitis vinifera HOM05D006603 ORTHO05D007786 5.9e-32 141.4 140 61.4
Lalb_Chr03g0036931 Lupinus albus HOM05D006603 ORTHO05D007786 7.8e-32 141.0 145 57.2
Glyma.20G082000 Glycine max HOM05D006603 ORTHO05D007786 1.0e-31 140.6 145 58.6
TWI09G1292 Tripterygium wilfordii HOM05D006603 ORTHO05D007786 1.0e-31 140.6 144 59.0
CANSAT78G1588 Cannabis sativa HOM05D006603 ORTHO05D007786 2.3e-31 139.4 148 58.1
Lj6g0018890 Lotus japonicus HOM05D006603 ORTHO05D007786 3.0e-31 139.0 144 56.2
MELO3C023048.2 Cucumis melo HOM05D006603 ORTHO05D007786 8.6e-31 137.5 146 57.5
TWI73G0993 Tripterygium wilfordii HOM05D006603 ORTHO05D007786 1.1e-30 137.1 145 55.9
FvH4_4g05040 Fragaria vesca HOM05D006603 ORTHO05D007786 1.5e-30 136.7 144 56.2
TPR.G23967 Trifolium pratense HOM05D006603 ORTHO05D007786 1.5e-30 136.7 146 56.2
Thecc.04G267600 Theobroma cacao HOM05D006603 ORTHO05D007786 1.9e-30 136.3 145 57.9
RcHm_v2.0_Chr4g0395941 Rosa chinensis HOM05D006603 ORTHO05D007786 3.3e-30 135.6 145 60.0
Potri.008G173000 Populus trichocarpa HOM05D006603 ORTHO05D007786 4.3e-30 135.2 145 56.6
Phvul.007G231900 Phaseolus vulgaris HOM05D006603 ORTHO05D007786 9.5e-30 134.0 146 56.8
FAN12G4195 Fragaria x ananassa HOM05D006603 ORTHO05D007786 1.6e-29 133.3 144 55.6
MD16G1228700 Malus domestica HOM05D006603 ORTHO05D007786 1.6e-29 133.3 142 59.2
Cc03_g06500 Coffea canephora HOM05D006603 ORTHO05D007786 2.1e-29 132.9 143 59.4
CsaV3_2G012360 Cucumis sativus L. HOM05D006603 ORTHO05D007786 2.8e-29 132.5 146 56.2
Potri.010G064500 Populus trichocarpa HOM05D006603 ORTHO05D007786 3.6e-29 132.1 146 56.2
Gohir.A09G230800 Gossypium hirsutum HOM05D006603 ORTHO05D007786 8.0e-29 131.0 143 55.9
Gohir.D09G231900 Gossypium hirsutum HOM05D006603 ORTHO05D007786 8.0e-29 131.0 143 55.9
MD13G1223900 Malus domestica HOM05D006603 ORTHO05D007786 1.8e-28 129.8 141 57.4
Carub.0001s0377 Capsella rubella HOM05D006603 ORTHO05D007786 3.1e-28 129.0 142 56.3
PGR004G2303 Punica granatum HOM05D006603 ORTHO05D007786 4.0e-28 128.6 146 53.4
Hund22279 Selenicereus undatus HOM05D006603 ORTHO05D007786 5.2e-28 128.3 142 54.2
Duzib151G0118 Durio zibethinus HOM05D006603 ORTHO05D007786 1.2e-27 127.1 139 58.3
AUR62018035 Chenopodium quinoa HOM05D006603 ORTHO05D007786 1.5e-27 126.7 118 54.2
FAN22G1779 Fragaria x ananassa HOM05D006603 ORTHO05D007786 1.5e-27 126.7 144 53.5
Manes.15G046500 Manihot esculenta HOM05D006603 ORTHO05D007786 1.5e-27 126.7 138 58.0
THA.LOC104816009 Tarenaya hassleriana HOM05D006603 ORTHO05D007786 2.6e-27 125.9 143 55.2
arahy.Tifrunner.gnm1.ann1.T2GGRX Arachis hypogaea HOM05D006603 ORTHO05D007786 4.4e-27 125.2 171 50.9
AUR62015239 Chenopodium quinoa HOM05D006603 ORTHO05D007786 4.4e-27 125.2 118 53.4
Thhalv10009014m.g Eutrema salsugineum HOM05D006603 ORTHO05D007786 5.8e-27 124.8 142 55.6
Nitab4.5_0005154g0030 Nicotiana tabacum HOM05D006603 ORTHO05D007786 7.5e-27 124.4 139 56.8
Duzib212G0187 Durio zibethinus HOM05D006603 ORTHO05D007786 2.2e-26 122.9 143 54.5
arahy.Tifrunner.gnm1.ann1.GIKJ41 Arachis hypogaea HOM05D006603 ORTHO05D007786 2.9e-26 122.5 171 49.7
Lsat_1_v5_gn_1_75441 Lactuca sativa HOM05D006603 ORTHO05D007786 4.9e-26 121.7 150 52.0
Peaxi162Scf00531g00210 Petunia axillaris HOM05D006603 ORTHO05D007786 4.9e-26 121.7 148 54.1
HanXRQChr01g0023081 Helianthus annuus HOM05D006603 ORTHO05D007786 6.4e-26 121.3 153 50.3
BolC5t29054H Brassica oleracea HOM05D006603 ORTHO05D007786 8.3e-26 120.9 142 52.8
CAN.G812.23 Capsicum annuum HOM05D006603 ORTHO05D007786 8.3e-26 120.9 141 56.0
Rhsim02G0047700 Rhododendron simsii HOM05D006603 ORTHO05D007786 8.3e-26 120.9 118 58.5
AT1G04555 Arabidopsis thaliana HOM05D006603 ORTHO05D007786 1.1e-25 120.6 144 53.5
AL1G14230 Arabidopsis lyrata HOM05D006603 ORTHO05D007786 2.4e-25 119.4 144 54.2
Aa31LG1G20320 Aethionema arabicum HOM05D006603 ORTHO05D007786 9.2e-25 117.5 143 55.9
BraA10t42567Z Brassica rapa HOM05D006603 ORTHO05D007786 1.2e-24 117.1 143 52.4
Sp1g03390 Schrenkiella parvula HOM05D006603 ORTHO05D007786 1.2e-24 117.1 149 51.0
Os02g0816700 Oryza sativa ssp. japonica HOM05D006603 ORTHO05D007786 2.7e-24 115.9 139 51.8
CDE04G0122 Ceratophyllum demersum HOM05D006603 ORTHO05D007786 4.6e-24 115.2 146 53.4
Oeu059390.1 Olea europaea HOM05D006603 ORTHO05D007786 4.6e-24 115.2 149 52.3
ECA248G1661 Erigeron canadensis HOM05D006603 ORTHO05D007786 6.0e-24 114.8 137 52.6
Sopen09g033770 Solanum pennellii HOM05D006603 ORTHO05D007786 7.8e-24 114.4 139 53.2
QL06p021600 Quercus lobata HOM05D006603 ORTHO05D007786 1.3e-23 113.6 98 67.3
MSTRG.9849 Avicennia marina HOM05D006603 ORTHO05D007786 5.0e-23 111.7 149 51.0
BcaNung06560 Brassica carinata HOM05D006603 ORTHO05D007786 5.0e-23 111.7 142 52.8
Haze_11482 Corylus avellana HOM05D006603 ORTHO05D007786 6.6e-23 111.3 97 68.0
PGSC0003DMG400001502 Solanum tuberosum HOM05D006603 ORTHO05D007786 2.5e-22 109.4 139 50.4
CARHR003900 Cardamine hirsuta HOM05D006603 ORTHO05D007786 3.3e-22 109.0 136 52.9
BolC8t46925H Brassica oleracea HOM05D006603 ORTHO05D007786 7.3e-22 107.8 148 47.3
Ah.04g153810 Amaranthus hybridus HOM05D006603 ORTHO05D007786 9.5e-22 107.5 116 55.2
BolC8t46924H Brassica oleracea HOM05D006603 ORTHO05D007786 1.2e-21 107.1 143 49.0
Cfa014798 Carpinus fangiana HOM05D006603 ORTHO05D007786 1.2e-21 107.1 95 67.4
Zm00001eb191430 Zea mays HOM05D006603 ORTHO05D007786 2.8e-21 105.9 99 65.7
Sed0025873 Sechium edule HOM05D006603 ORTHO05D007786 3.6e-21 105.5 115 54.8
VMungo0720G0308 Vigna mungo HOM05D006603 ORTHO05D007786 3.6e-21 105.5 113 56.6
BolC8t46928H Brassica oleracea HOM05D006603 ORTHO05D007786 4.7e-21 105.1 144 49.3
Migut.G00559 Erythranthe guttata HOM05D006603 ORTHO05D007786 8.1e-21 104.4 154 46.8
BolC8t46922H Brassica oleracea HOM05D006603 ORTHO05D007786 1.4e-20 103.6 144 48.6
BcaC07g36903 Brassica carinata HOM05D006603 ORTHO05D007786 1.8e-20 103.2 140 50.7
SGA_v2.0_scaffold147G36268 Striga asiatica HOM05D006603 ORTHO05D007786 3.1e-20 102.4 142 52.1
A08p36880 Brassica napus HOM05D006603 ORTHO05D007786 2.6e-19 99.4 144 47.9
FAN17G1046 Fragaria x ananassa HOM05D006603 ORTHO05D007786 2.6e-19 99.4 97 60.8
ClCG06G007300 Citrullus lanatus HOM05D006603 ORTHO05D007786 4.4e-19 98.6 150 46.7
COL.COLO4_15990 Corchorus olitorius HOM05D006603 ORTHO05D007786 4.4e-19 98.6 117 53.0
Gorai.006G254700 Gossypium raimondii HOM05D006603 ORTHO05D007786 9.8e-19 97.4 116 51.7
Sabra08G0132100 Salix brachista HOM05D006603 ORTHO05D007786 9.8e-19 97.4 95 62.1
Prupe.1G050700 Prunus persica HOM05D006603 ORTHO05D007786 1.7e-18 96.7 97 61.9
Nn1g02998 Nelumbo nucifera HOM05D006603 ORTHO05D007786 4.1e-17 92.0 78 60.3
Solyc09g090820.4 Solanum lycopersicum HOM05D006603 ORTHO05D007786 1.6e-16 90.1 91 61.5
C05p02730 Brassica napus HOM05D001210 ORTHO05D001036 2.1e-16 89.7 112 50.0
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 2.7e-16 89.4 94 58.5
Cfa014800 Carpinus fangiana HOM05D006603 ORTHO05D007786 4.6e-16 88.6 83 65.1
BcaB03g13488 Brassica carinata HOM05D006603 ORTHO05D007786 1.3e-15 87.0 125 45.6
Dinv27124 Davidia involucrata HOM05D006603 ORTHO05D007786 1.3e-15 87.0 81 65.4
BolC8t52747H Brassica oleracea HOM05D000117 ORTHO05D007786 1.7e-15 86.7 136 45.6
Nitab4.5_0001041g0010 Nicotiana tabacum HOM05D006603 ORTHO05D007786 3.9e-15 85.5 119 51.3
HPP92_020757 Vanilla planifolia HOM05D006603 ORTHO05D007786 5.1e-15 85.1 148 39.9
unitig_32.g11693 Utricularia gibba HOM05D006603 ORTHO05D007786 1.5e-14 83.6 177 37.3
C08p01190 Brassica napus HOM05D003335 ORTHO05D003853 2.5e-14 82.8 102 55.9
BraA09t42112Z Brassica rapa HOM05D000117 ORTHO05D007786 3.3e-14 82.4 99 55.6
BraA08t35589Z Brassica rapa HOM05D003335 ORTHO05D003853 2.1e-13 79.7 97 56.7
SalBow2G0496 Salvia bowleyana HOM05D006603 ORTHO05D007786 6.8e-12 74.7 119 46.2
GSVIVG01027940001 Vitis vinifera HOM05D006603 ORTHO05D015671 9.9e-11 70.9 92 53.3
arahy.Tifrunner.gnm1.ann1.QP5CHE Arachis hypogaea HOM05D006603 ORTHO05D007786 1.7e-10 70.1 127 44.1
arahy.Tifrunner.gnm1.ann1.YUK4FD Arachis hypogaea HOM05D006603 ORTHO05D007786 6.4e-10 68.2 139 42.4
Cpa.g.sc59.20 Carica papaya HOM05D006603 ORTHO05D007786 2.4e-09 66.2 74 52.7
arahy.Tifrunner.gnm1.ann1.M12JR8 Arachis hypogaea HOM05D006603 ORTHO05D007786 7.1e-09 64.7 135 40.7
Mapoly0020s0146 Marchantia polymorpha HOM05D002103 ORTHO05D007786 1.3e-07 60.5 146 33.6
arahy.Tifrunner.gnm1.ann1.N50CGY Arachis hypogaea HOM05D006603 ORTHO05D007786 1.7e-07 60.1 93 47.3
Gohir.D06G015300 Gossypium hirsutum HOM05D002103 ORTHO05D004020 2.3e-07 59.7 140 32.9
Gohir.A06G017200 Gossypium hirsutum HOM05D002103 ORTHO05D004020 3.9e-07 58.9 140 32.1
A09p67800 Brassica napus HOM05D000117 ORTHO05D001036 8.6e-07 57.8 68 55.9
TWI36G1154 Tripterygium wilfordii HOM05D002103 ORTHO05D004020 1.1e-06 57.4 136 27.9
C08p52130 Brassica napus HOM05D000117 ORTHO05D001036 4.3e-06 55.5 68 50.0
Sabra10G0042500 Salix brachista HOM05D006603 ORTHO05D007786 4.3e-06 55.5 88 43.2
arahy.Tifrunner.gnm1.ann1.49WF5R Arachis hypogaea HOM05D006603 ORTHO05D007786 5.6e-06 55.1 84 48.8


User provided reference genes

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