Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G7176 Papaver somniferum HOM05D006656 ORTHO05D008208 1.6e-129 466.1 234 100.0
PSO447G0273 Papaver somniferum HOM05D006656 ORTHO05D008208 2.1e-81 306.2 160 97.5
Gohir.A09G228200 Gossypium hirsutum HOM05D006656 ORTHO05D008208 1.6e-68 263.5 160 81.9
COL.COLO4_15934 Corchorus olitorius HOM05D006656 ORTHO05D008208 4.6e-68 261.9 162 79.0
Eucgr.H02989 Eucalyptus grandis HOM05D006656 ORTHO05D008208 1.0e-67 260.8 160 81.2
QL06p020043 Quercus lobata HOM05D006656 ORTHO05D008208 1.0e-67 260.8 158 77.8
Ciclev10006077m.g Citrus clementina HOM05D006656 ORTHO05D008208 6.7e-67 258.1 154 81.2
arahy.Tifrunner.gnm1.ann1.CLZM2Q Arachis hypogaea HOM05D006656 ORTHO05D008208 1.1e-66 257.3 159 79.2
Gohir.D09G229300 Gossypium hirsutum HOM05D006656 ORTHO05D008208 1.1e-66 257.3 155 81.3
Gorai.006G252000 Gossypium raimondii HOM05D006656 ORTHO05D008208 1.1e-66 257.3 155 81.3
Cpa.g.sc44.21 Carica papaya HOM05D006656 ORTHO05D008208 3.3e-66 255.8 154 80.5
Nn1g02903 Nelumbo nucifera HOM05D006656 ORTHO05D008208 5.6e-66 255.0 155 81.3
Lalb_Chr03g0037311 Lupinus albus HOM05D006656 ORTHO05D008208 1.6e-65 253.4 158 78.5
Ca_12138_v3 Cicer arietinum L. HOM05D006656 ORTHO05D008208 2.1e-65 253.1 159 75.5
Sc25g0003620 Simmondsia chinensis HOM05D006656 ORTHO05D008208 2.1e-65 253.1 159 77.4
MD13G1218700 Malus domestica HOM05D006656 ORTHO05D008208 2.8e-65 252.7 158 76.6
Potri.010G068200 Populus trichocarpa HOM05D006656 ORTHO05D008208 3.7e-65 252.3 158 75.9
Thecc.04G260300 Theobroma cacao HOM05D006656 ORTHO05D008208 6.2e-65 251.5 160 77.5
TWI09G0269 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 6.2e-65 251.5 158 78.5
TWI09G1522 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 6.2e-65 251.5 158 78.5
Dinv29827 Davidia involucrata HOM05D006656 ORTHO05D008208 8.1e-65 251.1 157 77.1
Glyma.10G005200 Glycine max HOM05D006656 ORTHO05D008208 8.1e-65 251.1 159 74.8
Medtr1g041795 Medicago truncatula HOM05D006656 ORTHO05D008208 8.1e-65 251.1 159 74.8
FvH4_4g04220 Fragaria vesca HOM05D006656 ORTHO05D008208 1.4e-64 250.4 158 76.6
TPR.G25151 Trifolium pratense HOM05D006656 ORTHO05D008208 1.4e-64 250.4 159 76.1
Actinidia39917 Actinidia chinensis HOM05D006656 ORTHO05D008208 1.8e-64 250.0 154 77.9
CSS0031602 Camellia sinensis var. sinensis HOM05D006656 ORTHO05D008208 2.4e-64 249.6 155 76.8
CANSAT78G1635 Cannabis sativa HOM05D006656 ORTHO05D008208 2.4e-64 249.6 159 76.1
Lj6g0027143 Lotus japonicus HOM05D006656 ORTHO05D008208 3.1e-64 249.2 159 75.5
PGR004G1080 Punica granatum HOM05D006656 ORTHO05D008208 4.0e-64 248.8 154 79.2
Sed0021014 Sechium edule HOM05D006656 ORTHO05D008208 5.3e-64 248.4 155 78.1
Hma1.2p1_0112F.1_g054500 Hydrangea macrophylla HOM05D006656 ORTHO05D008208 9.0e-64 247.7 158 77.8
RcHm_v2.0_Chr4g0394701 Rosa chinensis HOM05D006656 ORTHO05D008208 9.0e-64 247.7 158 75.3
ClCG05G004140 Citrullus lanatus HOM05D006656 ORTHO05D008208 2.6e-63 246.1 157 75.8
Dinv27090 Davidia involucrata HOM05D006656 ORTHO05D008208 2.6e-63 246.1 158 76.6
FAN12G3008 Fragaria x ananassa HOM05D006656 ORTHO05D008208 5.8e-63 245.0 158 74.7
Hund11920 Selenicereus undatus HOM05D006656 ORTHO05D008208 5.8e-63 245.0 158 74.1
Rhsim02G0042500 Rhododendron simsii HOM05D006656 ORTHO05D008208 1.0e-62 244.2 149 80.5
CiPaw.01G180600 Carya illinoinensis HOM05D006656 ORTHO05D008208 1.7e-62 243.4 158 75.9
CsaV3_3G011860 Cucumis sativus L. HOM05D006656 ORTHO05D008208 1.7e-62 243.4 157 75.8
Psat6g137160 Pisum sativum HOM05D006656 ORTHO05D008208 1.7e-62 243.4 152 76.3
Nitab4.5_0001425g0100 Nicotiana tabacum HOM05D006656 ORTHO05D008208 2.2e-62 243.0 157 74.5
Manes.13G093430 Manihot esculenta HOM05D006656 ORTHO05D008208 2.9e-62 242.7 158 74.1
Nitab4.5_0013448g0010 Nicotiana tabacum HOM05D006656 ORTHO05D008208 3.8e-62 242.3 156 75.0
CAN.G220.47 Capsicum annuum HOM05D006656 ORTHO05D008208 4.9e-62 241.9 158 72.8
DCAR_030758 Daucus carota HOM05D000730 ORTHO05D008208 4.9e-62 241.9 158 72.8
Phvul.007G275000 Phaseolus vulgaris HOM05D006656 ORTHO05D008208 6.5e-62 241.5 159 72.3
Solyc09g090430.3 Solanum lycopersicum HOM05D006656 ORTHO05D008208 8.4e-62 241.1 156 73.1
Sopen09g033350 Solanum pennellii HOM05D006656 ORTHO05D008208 8.4e-62 241.1 156 73.1
PGSC0003DMG400017160 Solanum tuberosum HOM05D006656 ORTHO05D008208 8.4e-62 241.1 156 73.7
arahy.Tifrunner.gnm1.ann1.DD5QG4 Arachis hypogaea HOM05D006656 ORTHO05D008208 1.1e-61 240.7 152 77.0
Peaxi162Scf00602g00515 Petunia axillaris HOM05D006656 ORTHO05D008208 1.1e-61 240.7 157 74.5
Sabra10G0038900 Salix brachista HOM05D006656 ORTHO05D008208 1.4e-61 240.4 150 76.0
THA.LOC104804764 Tarenaya hassleriana HOM05D006656 ORTHO05D008208 1.4e-61 240.4 159 74.8
Prupe.1G045500 Prunus persica HOM05D006656 ORTHO05D008208 1.9e-61 240.0 158 73.4
arahy.Tifrunner.gnm1.ann1.C3VAXP Arachis hypogaea HOM05D006656 ORTHO05D008208 4.2e-61 238.8 153 76.5
HanXRQChr04g0115371 Helianthus annuus HOM05D006656 ORTHO05D008208 5.5e-61 238.4 155 75.5
Atru.chr4.1959 Acer truncatum HOM05D006656 ORTHO05D008208 7.1e-61 238.0 152 75.7
HPP92_001387 Vanilla planifolia HOM05D006656 ORTHO05D008208 7.1e-61 238.0 151 77.5
FAN17G2925 Fragaria x ananassa HOM05D006656 ORTHO05D008208 9.3e-61 237.7 160 72.5
Lsat_1_v5_gn_1_75161 Lactuca sativa HOM05D006656 ORTHO05D008208 9.3e-61 237.7 155 74.2
Ah.13g072350 Amaranthus hybridus HOM05D006656 ORTHO05D008208 1.2e-60 237.3 151 76.8
Aqoxy2G03715 Aquilegia oxysepala HOM05D006656 ORTHO05D008208 1.6e-60 236.9 158 71.5
CDE02G2281 Ceratophyllum demersum HOM05D006656 ORTHO05D008208 2.1e-60 236.5 151 76.2
MBI14_g30459_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 2.1e-60 236.5 157 74.5
SalBow3G1837 Salvia bowleyana HOM05D006656 ORTHO05D008208 2.1e-60 236.5 155 73.5
vmacro15465 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 2.1e-60 236.5 143 79.7
ECA248G3216 Erigeron canadensis HOM05D006656 ORTHO05D008208 2.7e-60 236.1 155 74.2
MBI07_g22362_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 3.5e-60 235.7 157 74.5
Migut.G00494 Erythranthe guttata HOM05D006656 ORTHO05D008208 1.3e-59 233.8 154 73.4
HanXRQChr01g0022881 Helianthus annuus HOM05D006656 ORTHO05D008208 1.8e-59 233.4 155 73.5
EL10Ac3g04969 Beta vulgaris HOM05D006656 ORTHO05D008208 2.3e-59 233.0 151 73.5
MSTRG.4156 Avicennia marina HOM05D006656 ORTHO05D008208 3.0e-59 232.6 154 70.8
AUR62002173 Chenopodium quinoa HOM05D006656 ORTHO05D008208 5.1e-59 231.9 143 79.7
VMungo0720G2665 Vigna mungo HOM05D006656 ORTHO05D008208 1.5e-58 230.3 152 73.0
Os10g0471300 Oryza sativa ssp. japonica HOM05D006656 ORTHO05D008208 1.9e-58 229.9 151 74.8
AUR62015536 Chenopodium quinoa HOM05D006656 ORTHO05D008208 2.5e-58 229.6 177 68.4
ATR0736G110 Amborella trichopoda HOM05D006656 ORTHO05D008208 4.3e-58 228.8 156 67.9
BcaC06g35534 Brassica carinata HOM05D006656 ORTHO05D008208 5.7e-58 228.4 155 71.6
BolC7t41871H Brassica oleracea HOM05D006656 ORTHO05D008208 5.7e-58 228.4 155 71.6
Sp3g21170 Schrenkiella parvula HOM05D006656 ORTHO05D008208 5.7e-58 228.4 155 71.6
SpUn0047_0050 Schrenkiella parvula HOM05D006656 ORTHO05D008208 5.7e-58 228.4 155 71.6
AT3G23490 Arabidopsis thaliana HOM05D006656 ORTHO05D008208 7.4e-58 228.0 154 71.4
AL3G38180 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 9.6e-58 227.6 154 71.4
BcaB06g26499 Brassica carinata HOM05D006656 ORTHO05D008208 9.6e-58 227.6 155 71.0
BraA07t28683Z Brassica rapa HOM05D006656 ORTHO05D008208 1.3e-57 227.3 155 71.0
A07p08920 Brassica napus HOM05D006656 ORTHO05D008208 1.6e-57 226.9 155 70.3
C07p13760 Brassica napus HOM05D006656 ORTHO05D008208 1.6e-57 226.9 155 71.0
Carub.0003s2372 Capsella rubella HOM05D006656 ORTHO05D008208 1.6e-57 226.9 154 70.8
Thhalv10021585m.g Eutrema salsugineum HOM05D006656 ORTHO05D008208 2.1e-57 226.5 155 70.3
Aa31LG8G9940 Aethionema arabicum HOM05D006656 ORTHO05D008208 1.5e-55 220.3 146 71.9
MBI07_g15427_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 2.2e-54 216.5 157 70.1
Zm00001eb046120 Zea mays HOM05D006656 ORTHO05D008208 2.2e-54 216.5 154 71.4
SGA_v2.0_scaffold67G22735 Striga asiatica HOM05D006656 ORTHO05D008208 8.5e-54 214.5 190 59.5
Lj3A676G52 Lonicera japonica HOM05D006656 ORTHO05D008208 1.9e-53 213.4 181 61.3
vmacro15466 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 6.7e-51 204.9 165 63.6
Pp3c19_11440 Physcomitrium patens HOM05D006656 ORTHO05D008208 1.6e-49 200.3 150 62.7
Mapoly0080s0009 Marchantia polymorpha HOM05D006656 ORTHO05D008208 1.7e-46 190.3 158 58.2
AagrBONN_evm.TU.Sc2ySwM_344.2747 Anthoceros agrestis HOM05D006656 ORTHO05D008208 1.8e-43 180.3 159 57.9
Duzib151G0018 Durio zibethinus HOM05D006656 ORTHO05D008208 1.8e-43 180.3 122 73.8
GSVIVG01027874001 Vitis vinifera HOM05D006656 ORTHO05D008208 2.4e-40 169.9 89 89.9
Cfa014756 Carpinus fangiana HOM05D006656 ORTHO05D008208 9.1e-40 167.9 114 71.9
MELO3C006399.2 Cucumis melo HOM05D000603 ORTHO05D003510 9.1e-40 167.9 149 57.0
HPP92_000029 Vanilla planifolia HOM05D006656 ORTHO05D008208 3.4e-39 166.0 162 59.3
CBR_g36666 Chara braunii HOM05D006656 ORTHO05D008208 1.7e-38 163.7 159 50.3
Cc03_g05940 Coffea canephora HOM05D006656 ORTHO05D008208 2.2e-38 163.3 89 83.1
CBR_g71972 Chara braunii HOM05D006656 ORTHO05D008208 6.1e-36 155.2 153 52.3
AL242U10020 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 1.0e-35 154.5 110 69.1
Haze_11433 Corylus avellana HOM05D006656 ORTHO05D008208 2.0e-34 150.2 261 38.3
PRCOL_00005673 Prasinoderma coloniale HOM05D006656 ORTHO05D008208 1.4e-32 144.1 154 46.1
SMO271G0046 Selaginella moellendorffii HOM05D006656 ORTHO05D008208 1.1e-29 134.4 140 47.1
arahy.Tifrunner.gnm1.ann1.USJ12Z Arachis hypogaea HOM05D006656 ORTHO05D008208 1.5e-26 124.0 88 70.5
Gohir.A02G041301 Gossypium hirsutum HOM05D006656 ORTHO05D008208 1.5e-18 97.4 64 71.9
Nitab4.5_0000014g0170 Nicotiana tabacum HOM05D006656 ORTHO05D008208 7.5e-18 95.1 76 63.2
BcaB02g10054 Brassica carinata HOM05D006656 ORTHO05D008208 7.7e-15 85.1 64 67.2
AagrBONN_evm.TU.Sc2ySwM_344.2745 Anthoceros agrestis HOM05D006656 ORTHO05D008208 3.8e-14 82.8 91 50.5
BcaB06g27105 Brassica carinata HOM05D006656 ORTHO05D008208 1.9e-13 80.5 62 62.9
MCO04G243 Micromonas commoda HOM05D006656 ORTHO05D008208 5.5e-13 79.0 151 34.4
BolC2t11169H Brassica oleracea HOM05D006656 ORTHO05D008208 9.5e-13 78.2 55 69.1
BcaC09g51699 Brassica carinata HOM05D006656 ORTHO05D008208 2.8e-12 76.6 45 77.8
C05p47480 Brassica napus HOM05D006656 ORTHO05D008208 2.8e-09 66.6 37 83.8
C03p47720 Brassica napus HOM05D006656 ORTHO05D008208 1.8e-08 63.9 37 78.4
HPP92_027915 Vanilla planifolia HOM05D003501 ORTHO05D004388 4.5e-07 59.3 52 57.7


User provided reference genes

Program Settings