Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G7107 Papaver somniferum HOM05D005826 ORTHO05D004357 1.1e-109 400.6 305 100.0
PSO761G0619 Papaver somniferum HOM05D005826 ORTHO05D004357 4.7e-97 358.6 305 93.4
Manes.08G107500 Manihot esculenta HOM05D005826 ORTHO05D004357 1.4e-72 277.3 304 62.8
TAR636G1621 Trochodendron aralioides HOM05D005826 ORTHO05D004357 1.7e-70 270.4 310 58.1
Nn3g21953 Nelumbo nucifera HOM05D005826 ORTHO05D004357 3.2e-69 266.2 308 59.4
GSVIVG01031331001 Vitis vinifera HOM05D005826 ORTHO05D004357 5.4e-69 265.4 322 58.4
Thecc.05G329600 Theobroma cacao HOM05D005826 ORTHO05D004357 4.6e-68 262.3 308 59.4
Sed0027683 Sechium edule HOM05D005826 ORTHO05D004357 3.9e-67 259.2 305 60.0
VMungo1383G1915 Vigna mungo HOM05D005826 ORTHO05D004357 6.7e-67 258.5 311 54.3
MD12G1199800 Malus domestica HOM05D005826 ORTHO05D004357 1.1e-66 257.7 306 60.1
RcHm_v2.0_Chr3g0458551 Rosa chinensis HOM05D005826 ORTHO05D004357 1.5e-66 257.3 311 74.3
Nn4g25335 Nelumbo nucifera HOM05D005826 ORTHO05D004357 2.5e-66 256.5 311 61.4
COL.COLO4_05485 Corchorus olitorius HOM05D005826 ORTHO05D004357 4.3e-66 255.8 308 54.2
FvH4_6g08510 Fragaria vesca HOM05D005826 ORTHO05D004357 7.4e-66 255.0 311 65.9
CSS0017545 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 9.6e-66 254.6 305 71.8
Ciclev10012662m.g Citrus clementina HOM05D005826 ORTHO05D004357 1.3e-65 254.2 306 62.1
FAN14G1262 Fragaria x ananassa HOM05D005826 ORTHO05D004357 1.6e-65 253.8 311 65.6
QL03p011008 Quercus lobata HOM05D005826 ORTHO05D004357 1.6e-65 253.8 280 78.9
Hund21832 Selenicereus undatus HOM05D005826 ORTHO05D004357 4.8e-65 252.3 299 51.8
Cfa006771 Carpinus fangiana HOM05D005826 ORTHO05D004357 6.2e-65 251.9 307 58.0
CiPaw.07G036400 Carya illinoinensis HOM05D005826 ORTHO05D004357 1.1e-64 251.1 307 59.6
CSS0045001 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 1.4e-64 250.8 307 71.7
FAN09G2233 Fragaria x ananassa HOM05D005826 ORTHO05D004357 1.4e-64 250.8 311 61.4
CsaV3_1G038040 Cucumis sativus L. HOM05D005826 ORTHO05D004357 5.3e-64 248.8 305 57.7
PGR083G1613 Punica granatum HOM05D005826 ORTHO05D004357 9.0e-64 248.1 304 53.6
Lalb_Chr18g0046231 Lupinus albus HOM05D005826 ORTHO05D004357 1.2e-63 247.7 311 58.5
ATR0796G273 Amborella trichopoda HOM05D005826 ORTHO05D004357 2.0e-63 246.9 300 65.7
Aqoxy2G02470 Aquilegia oxysepala HOM05D005826 ORTHO05D004357 5.8e-63 245.4 298 61.1
Manes.09G181300 Manihot esculenta HOM05D005826 ORTHO05D004357 5.8e-63 245.4 304 57.6
Actinidia17738 Actinidia chinensis HOM05D005826 ORTHO05D004357 9.9e-63 244.6 307 59.3
Glyma.03G228100 Glycine max HOM05D005826 ORTHO05D004357 9.9e-63 244.6 311 55.9
AUR62006820 Chenopodium quinoa HOM05D005826 ORTHO05D004357 1.3e-62 244.2 304 49.3
Atru.chr12.1539 Acer truncatum HOM05D005826 ORTHO05D004357 1.7e-62 243.8 308 57.5
SEGI_10560 Sequoiadendron giganteum HOM05D005826 ORTHO05D004357 1.7e-62 243.8 311 52.1
Phvul.001G222000 Phaseolus vulgaris HOM05D005826 ORTHO05D004357 2.2e-62 243.4 311 56.3
Migut.N00974 Erythranthe guttata HOM05D005826 ORTHO05D004357 2.9e-62 243.0 308 49.7
Cc02_g35870 Coffea canephora HOM05D005826 ORTHO05D004357 1.1e-61 241.1 305 68.9
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 1.9e-61 240.4 308 53.6
Prupe.6G304400 Prunus persica HOM05D005826 ORTHO05D004357 1.9e-61 240.4 304 70.4
TPR.G1630 Trifolium pratense HOM05D005826 ORTHO05D004357 2.4e-61 240.0 311 53.4
Cpa.g.sc48.51 Carica papaya HOM05D005826 ORTHO05D004357 3.2e-61 239.6 305 58.7
MSTRG.27910 Avicennia marina HOM05D005826 ORTHO05D004357 4.2e-61 239.2 306 62.4
Ca_09273_v3 Cicer arietinum L. HOM05D005826 ORTHO05D004357 4.2e-61 239.2 313 55.3
Mapoly0026s0010 Marchantia polymorpha HOM05D005826 ORTHO05D004357 7.1e-61 238.4 293 53.2
FAN02G3127 Fragaria x ananassa HOM05D005826 ORTHO05D004357 2.1e-60 236.9 310 65.8
Dinv30950 Davidia involucrata HOM05D005826 ORTHO05D004357 2.7e-60 236.5 308 54.2
Eucgr.B01823 Eucalyptus grandis HOM05D005826 ORTHO05D004357 4.6e-60 235.7 299 53.8
SGA_v2.0_scaffold22G09707 Striga asiatica HOM05D005826 ORTHO05D004357 4.6e-60 235.7 277 49.5
arahy.Tifrunner.gnm1.ann1.CWLZ7L Arachis hypogaea HOM05D005826 ORTHO05D004357 6.0e-60 235.3 309 54.4
Gorai.013G210000 Gossypium raimondii HOM05D005826 ORTHO05D004357 6.0e-60 235.3 327 66.7
Psat3g015120 Pisum sativum HOM05D005826 ORTHO05D004357 7.9e-60 235.0 294 55.1
Potri.005G002700 Populus trichocarpa HOM05D005826 ORTHO05D004357 7.9e-60 235.0 304 67.1
HPP92_027884 Vanilla planifolia HOM05D005826 ORTHO05D004357 7.9e-60 235.0 309 47.6
Gohir.D13G184300 Gossypium hirsutum HOM05D005826 ORTHO05D004357 1.0e-59 234.6 329 66.3
Rhsim11G0105000 Rhododendron simsii HOM05D005826 ORTHO05D004357 1.0e-59 234.6 281 61.6
TWI12G0016 Tripterygium wilfordii HOM05D005826 ORTHO05D004357 1.3e-59 234.2 283 54.4
FAN05G0435 Fragaria x ananassa HOM05D005826 ORTHO05D004357 2.3e-59 233.4 311 69.8
HPP92_006322 Vanilla planifolia HOM05D005826 ORTHO05D004357 2.3e-59 233.4 309 46.9
arahy.Tifrunner.gnm1.ann1.TKMT5T Arachis hypogaea HOM05D005826 ORTHO05D004357 5.1e-59 232.3 309 55.7
AUR62000478 Chenopodium quinoa HOM05D005826 ORTHO05D004357 5.1e-59 232.3 304 48.4
EL10Ac4g09561 Beta vulgaris HOM05D005826 ORTHO05D004357 6.7e-59 231.9 306 51.6
Hund07271 Selenicereus undatus HOM05D005826 ORTHO05D004357 6.7e-59 231.9 297 51.2
CANSAT54G1651 Cannabis sativa HOM05D005826 ORTHO05D004357 1.1e-58 231.1 307 53.4
Lj1g0011738 Lotus japonicus HOM05D005826 ORTHO05D004357 1.1e-58 231.1 311 52.4
Medtr7g111520 Medicago truncatula HOM05D005826 ORTHO05D004357 1.5e-58 230.7 295 58.3
Haze_03986 Corylus avellana HOM05D005826 ORTHO05D004357 1.3e-57 227.6 255 61.2
Dinv24515 Davidia involucrata HOM05D005826 ORTHO05D004357 1.3e-57 227.6 312 53.2
Sopen01g044700 Solanum pennellii HOM05D005826 ORTHO05D004357 2.1e-57 226.9 310 51.6
Glyma.19G225400 Glycine max HOM05D005826 ORTHO05D004357 2.8e-57 226.5 311 55.6
Hma1.2p1_0052F.1_g030400 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 6.2e-57 225.3 283 54.1
Solyc01g101250.3 Solanum lycopersicum HOM05D005826 ORTHO05D004357 1.1e-56 224.6 310 51.3
HanXRQChr09g0247941 Helianthus annuus HOM05D005826 ORTHO05D004357 1.2e-55 221.1 305 68.5
Sabra05G0000100 Salix brachista HOM05D005826 ORTHO05D004357 1.0e-54 218.0 306 65.7
Sabra05G0014200 Salix brachista HOM05D005826 ORTHO05D004357 1.0e-54 218.0 306 65.7
Lsat_1_v5_gn_7_64900 Lactuca sativa HOM05D005826 ORTHO05D004357 1.7e-54 217.2 323 52.0
Peaxi162Scf00194g00018 Petunia axillaris HOM05D005826 ORTHO05D004357 1.7e-54 217.2 309 64.7
Nitab4.5_0002516g0020 Nicotiana tabacum HOM05D005826 ORTHO05D004357 2.2e-54 216.9 334 62.9
CAN.G1248.16 Capsicum annuum HOM05D005826 ORTHO05D004357 2.9e-54 216.5 324 51.2
Sc09g0002410 Simmondsia chinensis HOM05D005826 ORTHO05D004357 8.4e-54 214.9 301 51.5
vmacro01667 Vaccinium macrocarpon HOM05D005826 ORTHO05D004357 8.4e-54 214.9 346 52.3
unitig_26.g9561 Utricularia gibba HOM05D005826 ORTHO05D005018 1.9e-53 213.8 270 52.6
CDE01G0499 Ceratophyllum demersum HOM05D005826 ORTHO05D004357 2.7e-52 209.9 301 67.4
Gohir.A13G177700 Gossypium hirsutum HOM05D005826 ORTHO05D004357 5.1e-51 205.7 320 63.4
Nitab4.5_0005662g0030 Nicotiana tabacum HOM05D005826 ORTHO05D004357 5.1e-51 205.7 307 64.2
Pp3c20_6860 Physcomitrium patens HOM05D005826 ORTHO05D004357 1.9e-50 203.8 295 48.5
DCAR_006590 Daucus carota HOM05D005826 ORTHO05D004357 9.7e-50 201.4 214 64.5
ClCG03G017880 Citrullus lanatus HOM05D005826 ORTHO05D004357 3.7e-49 199.5 343 50.7
Hma1.2p1_0052F.1_g030390 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 3.7e-49 199.5 198 60.6
Carub.0006s2438 Capsella rubella HOM05D005826 ORTHO05D004357 4.8e-49 199.1 304 51.6
A09p05710 Brassica napus HOM05D005826 ORTHO05D004357 6.3e-49 198.7 308 51.6
BraA09t36211Z Brassica rapa HOM05D005826 ORTHO05D004357 6.3e-49 198.7 308 51.6
Sabra13G0001500 Salix brachista HOM05D005826 ORTHO05D004357 1.8e-48 197.2 346 50.9
THA.LOC104821749 Tarenaya hassleriana HOM05D005826 ORTHO05D004357 1.8e-48 197.2 308 50.0
AT5G26610 Arabidopsis thaliana HOM05D005826 ORTHO05D004357 2.4e-48 196.8 305 49.8
Ah.06g190730 Amaranthus hybridus HOM05D005826 ORTHO05D004357 1.2e-47 194.5 307 48.9
Sp2g21260 Schrenkiella parvula HOM05D005826 ORTHO05D004357 2.0e-47 193.7 311 59.2
BcaB04g19716 Brassica carinata HOM05D005826 ORTHO05D004357 2.6e-47 193.4 304 59.5
BcaC04g23633 Brassica carinata HOM05D005826 ORTHO05D004357 2.6e-47 193.4 304 54.9
C09p06300 Brassica napus HOM05D005826 ORTHO05D004357 2.6e-47 193.4 304 54.9
BolC9t53550H Brassica oleracea HOM05D005826 ORTHO05D004357 2.6e-47 193.4 304 54.9
AL6G38590 Arabidopsis lyrata HOM05D005826 ORTHO05D004357 4.2e-45 186.0 332 46.1
Zm00001eb089260 Zea mays HOM05D005826 ORTHO05D004357 2.1e-44 183.7 297 53.9
Thhalv10004695m.g Eutrema salsugineum HOM05D005826 ORTHO05D004357 5.1e-43 179.1 307 45.6
Aa31LG11G9920 Aethionema arabicum HOM05D005826 ORTHO05D004357 1.5e-42 177.6 290 60.0
Rhsim11G0104700 Rhododendron simsii HOM05D005826 ORTHO05D004357 5.7e-42 175.6 284 48.6
ECA240G4745 Erigeron canadensis HOM05D005826 ORTHO05D004357 7.4e-42 175.3 315 51.4
MBI12_g27791_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 1.1e-40 171.4 189 51.9
CARHR186850 Cardamine hirsuta HOM05D005826 ORTHO05D004357 1.8e-40 170.6 282 61.0
SMO196G0190 Selaginella moellendorffii HOM05D005826 ORTHO05D004357 5.7e-34 149.1 175 46.3
MELO3C015241.2 Cucumis melo HOM05D005826 ORTHO05D004357 6.5e-30 135.6 102 69.6
MBI06_g28828_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 1.1e-29 134.8 158 69.6
MBI12_g47801_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 8.0e-28 128.6 166 44.6
MBI09_g02136_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 9.7e-26 121.7 189 43.9
Os04g0115400 Oryza sativa ssp. japonica HOM05D005826 ORTHO05D004357 1.1e-24 118.2 99 64.6
CBR_g48434 Chara braunii HOM05D005826 ORTHO05D004357 3.1e-24 116.7 119 50.4
Potri.013G002100 Populus trichocarpa HOM05D005826 ORTHO05D004357 5.3e-24 115.9 160 66.2
AagrBONN_evm.TU.Sc2ySwM_362.2503 Anthoceros agrestis HOM05D005826 ORTHO05D004357 5.5e-21 105.9 137 45.3
BcaNung03909 Brassica carinata HOM05D005826 ORTHO05D004357 1.6e-20 104.4 239 36.0
PGR083G0870 Punica granatum HOM05D005826 ORTHO05D004357 4.4e-18 96.3 128 60.9
Cre03.g201250 Chlamydomonas reinhardtii HOM05D005826 ORTHO05D004357 6.3e-17 92.4 134 50.7
Os05g0229475 Oryza sativa ssp. japonica HOM05D005826 ORTHO05D004357 6.5e-14 82.4 46 80.4
PGSC0003DMG400018243 Solanum tuberosum HOM05D005826 ORTHO05D004357 1.9e-13 80.9 136 53.7
MBI18_g10370_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 6.8e-11 72.4 91 65.9
BraA06t26622Z Brassica rapa HOM05D005826 ORTHO05D004357 3.4e-10 70.1 46 67.4
A06p36960 Brassica napus HOM05D005826 ORTHO05D004357 5.7e-10 69.3 46 67.4
BcaNung03680 Brassica carinata HOM05D005826 ORTHO05D004357 7.5e-10 68.9 46 67.4
C07p41530 Brassica napus HOM05D005826 ORTHO05D004357 1.7e-09 67.8 48 66.7
BolC7t44686H Brassica oleracea HOM05D005826 ORTHO05D004357 1.7e-09 67.8 48 66.7
Migut.O00760 Erythranthe guttata HOM05D005826 ORTHO05D004357 1.1e-08 65.1 91 52.7
Oeu023421.1 Olea europaea HOM05D005826 ORTHO05D004357 4.1e-08 63.2 52 69.2
CDE12G0861 Ceratophyllum demersum HOM05D005826 ORTHO05D004357 1.6e-07 61.2 29 89.7
MELO3C021663.2 Cucumis melo HOM05D005826 ORTHO05D004357 2.7e-07 60.5 29 86.2
ECA247G0541 Erigeron canadensis HOM05D002899 ORTHO05D003850 1.7e-06 57.8 38 68.4


User provided reference genes

Program Settings