Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G7058 Papaver somniferum HOM05D002014 ORTHO05D001958 1.4e-77 293.1 180 100.0
PGSC0003DMG400016438 Solanum tuberosum HOM05D002014 ORTHO05D001958 4.4e-10 68.9 86 39.5
Gorai.013G243900 Gossypium raimondii HOM05D002014 ORTHO05D001958 9.8e-10 67.8 88 42.0
Gohir.D13G213600 Gossypium hirsutum HOM05D002014 ORTHO05D001958 1.7e-09 67.0 88 42.0
FvH4_3g01660 Fragaria vesca HOM05D002014 ORTHO05D001958 3.7e-09 65.9 62 50.0
FAN25G0379 Fragaria x ananassa HOM05D002014 ORTHO05D001958 8.3e-09 64.7 52 53.8
Cpa.g.sc152.40 Carica papaya HOM05D002014 ORTHO05D001958 1.4e-08 63.9 108 34.3
CiPaw.09G095900 Carya illinoinensis HOM05D002014 ORTHO05D001958 1.9e-08 63.5 67 46.3
CiPaw.09G096000 Carya illinoinensis HOM05D002014 ORTHO05D001958 1.9e-08 63.5 67 46.3
Manes.16G003600 Manihot esculenta HOM05D002014 ORTHO05D001958 1.9e-08 63.5 80 38.8
Sed0027752 Sechium edule HOM05D002014 ORTHO05D001958 1.9e-08 63.5 130 36.2
ClCG03G004360 Citrullus lanatus HOM05D002014 ORTHO05D001958 2.4e-08 63.2 50 52.0
MELO3C002423.2 Cucumis melo HOM05D002014 ORTHO05D001958 3.2e-08 62.8 50 52.0
CsaV3_1G010320 Cucumis sativus L. HOM05D002014 ORTHO05D001958 3.2e-08 62.8 50 52.0
Oeu016058.1 Olea europaea HOM05D002014 ORTHO05D001958 3.2e-08 62.8 80 37.5
Thecc.06G225200 Theobroma cacao HOM05D002014 ORTHO05D001958 4.1e-08 62.4 132 28.0
Aqoxy4G01491 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 5.4e-08 62.0 69 43.5
CAN.G1014.30 Capsicum annuum HOM05D002014 ORTHO05D001958 5.4e-08 62.0 82 37.8
CiPaw.09G095700 Carya illinoinensis HOM05D002014 ORTHO05D001958 5.4e-08 62.0 67 46.3
Gohir.A13G209200 Gossypium hirsutum HOM05D002014 ORTHO05D001958 5.4e-08 62.0 68 44.1
Nn1g07226 Nelumbo nucifera HOM05D002014 ORTHO05D001958 5.4e-08 62.0 69 46.4
Potri.010G228100 Populus trichocarpa HOM05D002014 ORTHO05D001958 5.4e-08 62.0 68 48.5
Thecc.06G225900 Theobroma cacao HOM05D002014 ORTHO05D001958 5.4e-08 62.0 87 40.2
Aqoxy4G01348 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 9.2e-08 61.2 69 43.5
Migut.M01346 Erythranthe guttata HOM05D002014 ORTHO05D001958 9.2e-08 61.2 127 31.5
Hma1.2p1_0298F.1_g117580 Hydrangea macrophylla HOM05D002014 ORTHO05D001958 9.2e-08 61.2 80 38.8
arahy.Tifrunner.gnm1.ann1.RRTI1V Arachis hypogaea HOM05D002014 ORTHO05D001958 1.2e-07 60.8 94 36.2
CAN.G1014.28 Capsicum annuum HOM05D002014 ORTHO05D001958 1.2e-07 60.8 133 31.6
Gohir.A01G082700 Gossypium hirsutum HOM05D002014 ORTHO05D001958 1.2e-07 60.8 48 58.3
MD07G1060200 Malus domestica HOM05D002014 ORTHO05D001958 1.2e-07 60.8 73 45.2
MD10G1325300 Malus domestica HOM05D002014 ORTHO05D001958 1.2e-07 60.8 73 45.2
Manes.16G003800 Manihot esculenta HOM05D002014 ORTHO05D001958 1.2e-07 60.8 50 52.0
Prupe.4G218600 Prunus persica HOM05D002014 ORTHO05D001958 1.2e-07 60.8 128 31.2
arahy.Tifrunner.gnm1.ann1.J355LQ Arachis hypogaea HOM05D002014 ORTHO05D001958 1.6e-07 60.5 82 37.8
Manes.16G003700 Manihot esculenta HOM05D002014 ORTHO05D001958 1.6e-07 60.5 81 37.0
Solyc02g036240.1 Solanum lycopersicum HOM05D002014 ORTHO05D001958 1.6e-07 60.5 54 48.1
PGSC0003DMG400021488 Solanum tuberosum HOM05D002014 ORTHO05D001958 1.6e-07 60.5 54 48.1
arahy.Tifrunner.gnm1.ann1.WJ6Y4Y Arachis hypogaea HOM05D002014 ORTHO05D001958 2.0e-07 60.1 48 52.1
Gohir.D01G069400 Gossypium hirsutum HOM05D002014 ORTHO05D001958 2.0e-07 60.1 48 58.3
Gorai.002G091700 Gossypium raimondii HOM05D002014 ORTHO05D001958 2.0e-07 60.1 48 58.3
TAR626G0649 Trochodendron aralioides HOM05D002014 ORTHO05D001958 2.0e-07 60.1 69 44.9
Actinidia26893 Actinidia chinensis HOM05D000131 ORTHO05D000086 2.7e-07 59.7 72 40.3
MD05G1350500 Malus domestica HOM05D002014 ORTHO05D001958 2.7e-07 59.7 83 38.6
Medtr2g024050 Medicago truncatula HOM05D002014 ORTHO05D001958 2.7e-07 59.7 90 40.0
Potri.004G006800 Populus trichocarpa HOM05D002014 ORTHO05D001958 2.7e-07 59.7 48 58.3
QL05p072432 Quercus lobata HOM05D002014 ORTHO05D001958 2.7e-07 59.7 81 40.7
QL05p072457 Quercus lobata HOM05D002014 ORTHO05D001958 2.7e-07 59.7 81 40.7
QL12p029974 Quercus lobata HOM05D002014 ORTHO05D001958 2.7e-07 59.7 81 40.7
Solyc02g036180.1 Solanum lycopersicum HOM05D002014 ORTHO05D001958 2.7e-07 59.7 54 48.1
Sopen02g011600 Solanum pennellii HOM05D002014 ORTHO05D001958 2.7e-07 59.7 61 44.3
TWI38G0617 Tripterygium wilfordii HOM05D002014 ORTHO05D001958 2.7e-07 59.7 52 50.0
TWI63G0638 Tripterygium wilfordii HOM05D002014 ORTHO05D001958 2.7e-07 59.7 64 40.6
Aqoxy1G03432 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 3.5e-07 59.3 69 42.0
arahy.Tifrunner.gnm1.ann1.62F4QN Arachis hypogaea HOM05D002014 ORTHO05D001958 3.5e-07 59.3 48 52.1
COL.COLO4_23506 Corchorus olitorius HOM05D002014 ORTHO05D001958 3.5e-07 59.3 138 32.6
COL.COLO4_31812 Corchorus olitorius HOM05D002014 ORTHO05D001958 3.5e-07 59.3 69 40.6
Duzib268G1717 Durio zibethinus HOM05D002014 ORTHO05D001958 3.5e-07 59.3 48 58.3
Potri.004G007200 Populus trichocarpa HOM05D002014 ORTHO05D001958 3.5e-07 59.3 88 35.2
Potri.011G008932 Populus trichocarpa HOM05D002014 ORTHO05D001958 3.5e-07 59.3 76 39.5
RcHm_v2.0_Chr5g0030071 Rosa chinensis HOM05D002014 ORTHO05D001958 3.5e-07 59.3 95 34.7
SGA_v2.0_scaffold7G03800 Striga asiatica HOM05D002014 ORTHO05D001958 3.5e-07 59.3 77 39.0
Dinv13928 Davidia involucrata HOM05D002014 ORTHO05D001958 4.6e-07 58.9 69 43.5
Lj6C73T0 Lonicera japonica HOM05D002014 ORTHO05D001958 4.6e-07 58.9 51 47.1
MD05G1350400 Malus domestica HOM05D002014 ORTHO05D001958 4.6e-07 58.9 67 43.3
Potri.004G007100 Populus trichocarpa HOM05D002014 ORTHO05D001958 4.6e-07 58.9 134 30.6
arahy.Tifrunner.gnm1.ann1.HIXG1Y Arachis hypogaea HOM05D002014 ORTHO05D001958 6.0e-07 58.5 94 34.0
Duzib235G0547 Durio zibethinus HOM05D002014 ORTHO05D001958 6.0e-07 58.5 51 49.0
Lalb_Chr13g0304291 Lupinus albus HOM05D002014 ORTHO05D001958 6.0e-07 58.5 77 37.7
Nn5g27689 Nelumbo nucifera HOM05D002014 ORTHO05D001958 6.0e-07 58.5 71 40.8
Sabra04G0003800 Salix brachista HOM05D002014 ORTHO05D001958 6.0e-07 58.5 69 42.0
Sabra04G0004000 Salix brachista HOM05D002014 ORTHO05D001958 6.0e-07 58.5 86 37.2
Aqoxy4G01492 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 7.8e-07 58.2 69 42.0
Manes.03G133500 Manihot esculenta HOM05D002014 ORTHO05D001958 7.8e-07 58.2 68 45.6
Psat1g178680 Pisum sativum HOM05D002014 ORTHO05D001958 7.8e-07 58.2 90 42.2
Potri.004G007000 Populus trichocarpa HOM05D002014 ORTHO05D001958 7.8e-07 58.2 53 50.9
RcHm_v2.0_Chr5g0002461 Rosa chinensis HOM05D002014 ORTHO05D001958 7.8e-07 58.2 148 27.0
Solyc02g080920.3 Solanum lycopersicum HOM05D002014 ORTHO05D001958 7.8e-07 58.2 82 35.4
Solyc03g031580.3 Solanum lycopersicum HOM05D002014 ORTHO05D001958 7.8e-07 58.2 51 54.9
TWI38G1116 Tripterygium wilfordii HOM05D002014 ORTHO05D001958 7.8e-07 58.2 128 28.9
Aqoxy3G01943 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 1.0e-06 57.8 69 42.0
Aqoxy4G01347 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 1.0e-06 57.8 69 42.0
EL10Ac8g20103 Beta vulgaris HOM05D002014 ORTHO05D001958 1.0e-06 57.8 54 48.1
EL10Ac8g20104 Beta vulgaris HOM05D002014 ORTHO05D001958 1.0e-06 57.8 54 48.1
Eucgr.E04009 Eucalyptus grandis HOM05D002014 ORTHO05D001958 1.0e-06 57.8 57 49.1
Lj6g0003684 Lotus japonicus HOM05D002014 ORTHO05D001958 1.0e-06 57.8 90 38.9
MD11G1212900 Malus domestica HOM05D002014 ORTHO05D001958 1.0e-06 57.8 91 38.5
Sabra10G0176000 Salix brachista HOM05D002014 ORTHO05D001958 1.0e-06 57.8 124 32.3
Sabra10G0176400 Salix brachista HOM05D002014 ORTHO05D001958 1.0e-06 57.8 124 32.3
SalBow8G4319 Salvia bowleyana HOM05D002014 ORTHO05D001958 1.0e-06 57.8 69 43.5
Cfa000183 Carpinus fangiana HOM05D002014 ORTHO05D001958 1.3e-06 57.4 71 43.7
AUR62012741 Chenopodium quinoa HOM05D002014 ORTHO05D001958 1.3e-06 57.4 80 41.2
ClCG03G004340 Citrullus lanatus HOM05D002014 ORTHO05D001958 1.3e-06 57.4 50 50.0
MELO3C002433.2 Cucumis melo HOM05D002014 ORTHO05D001958 1.3e-06 57.4 96 34.4
Lj5P713T17 Lonicera japonica HOM05D002014 ORTHO05D001958 1.3e-06 57.4 48 47.9
Lj6C71T2 Lonicera japonica HOM05D002014 ORTHO05D001958 1.3e-06 57.4 69 42.0
Lj6C72G5 Lonicera japonica HOM05D002014 ORTHO05D001958 1.3e-06 57.4 69 42.0
Lj6C73T1 Lonicera japonica HOM05D002014 ORTHO05D001958 1.3e-06 57.4 69 42.0
Lj6C74T0 Lonicera japonica HOM05D002014 ORTHO05D001958 1.3e-06 57.4 69 42.0
Lj6C9T0 Lonicera japonica HOM05D002014 ORTHO05D001958 1.3e-06 57.4 69 42.0
Medtr2g024010 Medicago truncatula HOM05D002014 ORTHO05D001958 1.3e-06 57.4 79 41.8
Nn1g07227 Nelumbo nucifera HOM05D002014 ORTHO05D001958 1.3e-06 57.4 81 38.3
Nn5g28102 Nelumbo nucifera HOM05D002014 ORTHO05D001958 1.3e-06 57.4 71 40.8
RcHm_v2.0_Chr4g0430691 Rosa chinensis HOM05D002014 ORTHO05D001958 1.3e-06 57.4 134 28.4
CiPaw.10G073600 Carya illinoinensis HOM05D002014 ORTHO05D001958 1.7e-06 57.0 69 37.7
Duzib235G0981 Durio zibethinus HOM05D002014 ORTHO05D001958 1.7e-06 57.0 136 30.9
Lj6g0005865 Lotus japonicus HOM05D002014 ORTHO05D001958 1.7e-06 57.0 90 38.9
Nn1g07229 Nelumbo nucifera HOM05D002014 ORTHO05D001958 1.7e-06 57.0 135 31.9
QL12p029986 Quercus lobata HOM05D002014 ORTHO05D001958 1.7e-06 57.0 69 43.5
RcHm_v2.0_Chr5g0002441 Rosa chinensis HOM05D002014 ORTHO05D001958 1.7e-06 57.0 61 44.3
RcHm_v2.0_Chr5g0040841 Rosa chinensis HOM05D002014 ORTHO05D001958 1.7e-06 57.0 48 54.2
Sabra04G0003600 Salix brachista HOM05D002014 ORTHO05D001958 1.7e-06 57.0 69 44.9
TPR.G13153 Trifolium pratense HOM05D002014 ORTHO05D001958 1.7e-06 57.0 82 39.0
Duzib235G0137 Durio zibethinus HOM05D002014 ORTHO05D001958 2.3e-06 56.6 51 49.0
MD07G1060300 Malus domestica HOM05D002014 ORTHO05D001958 2.3e-06 56.6 133 31.6
MD10G1325200 Malus domestica HOM05D002014 ORTHO05D001958 2.3e-06 56.6 69 39.1
Nn5g28113 Nelumbo nucifera HOM05D002014 ORTHO05D001958 2.3e-06 56.6 50 44.0
Psat1g178720 Pisum sativum HOM05D002014 ORTHO05D001958 2.3e-06 56.6 90 35.6
Thecc.07G031900 Theobroma cacao HOM05D002014 ORTHO05D001958 2.3e-06 56.6 132 34.1
TPR.G13073 Trifolium pratense HOM05D002014 ORTHO05D001958 2.3e-06 56.6 90 35.6
VMungo0540G0755 Vigna mungo HOM05D002014 ORTHO05D001958 2.3e-06 56.6 48 47.9
Aqoxy3G01944 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 3.0e-06 56.2 69 40.6
CANSAT56G2270 Cannabis sativa HOM05D002014 ORTHO05D001958 3.0e-06 56.2 51 51.0
Cpa.g.sc12.271 Carica papaya HOM05D002014 ORTHO05D001958 3.0e-06 56.2 72 44.4
Cpa.g.sc152.41 Carica papaya HOM05D002014 ORTHO05D001958 3.0e-06 56.2 48 52.1
ClCG03G004450 Citrullus lanatus HOM05D002014 ORTHO05D001958 3.0e-06 56.2 56 50.0
Ciclev10018080m.g Citrus clementina HOM05D002014 ORTHO05D001958 3.0e-06 56.2 48 47.9
COL.COLO4_31814 Corchorus olitorius HOM05D002014 ORTHO05D001958 3.0e-06 56.2 132 34.1
COL.COLO4_36217 Corchorus olitorius HOM05D002014 ORTHO05D001958 3.0e-06 56.2 48 56.2
MELO3C002422.2 Cucumis melo HOM05D002014 ORTHO05D001958 3.0e-06 56.2 50 48.0
CsaV3_1G010310 Cucumis sativus L. HOM05D002014 ORTHO05D001958 3.0e-06 56.2 50 48.0
FvH4_2g01120 Fragaria vesca HOM05D002014 ORTHO05D001958 3.0e-06 56.2 136 28.7
FvH4_3g01670 Fragaria vesca HOM05D002014 ORTHO05D001958 3.0e-06 56.2 69 40.6
FAN11G3522 Fragaria x ananassa HOM05D002014 ORTHO05D001958 3.0e-06 56.2 87 37.9
Glyma.09G006100 Glycine max HOM05D002014 ORTHO05D001958 3.0e-06 56.2 134 28.4
Nn1g07228 Nelumbo nucifera HOM05D002014 ORTHO05D001958 3.0e-06 56.2 55 47.3
RcHm_v2.0_Chr5g0002451 Rosa chinensis HOM05D002014 ORTHO05D001958 3.0e-06 56.2 140 29.3
Sabra04G0003900 Salix brachista HOM05D002014 ORTHO05D001958 3.0e-06 56.2 136 27.9
Sabra11G0009000 Salix brachista HOM05D002014 ORTHO05D012114 3.0e-06 56.2 82 37.8
Solyc02g036220.1 Solanum lycopersicum HOM05D002014 ORTHO05D001958 3.0e-06 56.2 52 46.2
CANSAT11G1707 Cannabis sativa HOM05D002014 ORTHO05D001958 3.9e-06 55.8 47 53.2
FAN20G2181 Fragaria x ananassa HOM05D002014 ORTHO05D001958 3.9e-06 55.8 134 28.4
Medtr2g024030 Medicago truncatula HOM05D002014 ORTHO05D001958 3.9e-06 55.8 90 37.8
Phvul.006G147200 Phaseolus vulgaris HOM05D002014 ORTHO05D001958 3.9e-06 55.8 69 44.9
QL05p072342 Quercus lobata HOM05D002014 ORTHO05D001958 3.9e-06 55.8 78 41.0
Thecc.06G225800 Theobroma cacao HOM05D002014 ORTHO05D001958 3.9e-06 55.8 82 34.1
arahy.Tifrunner.gnm1.ann1.RI9N4Q Arachis hypogaea HOM05D002014 ORTHO05D001958 5.0e-06 55.5 90 34.4
Ciclev10010199m.g Citrus clementina HOM05D002014 ORTHO05D001958 5.0e-06 55.5 62 45.2
Haze_06834 Corylus avellana HOM05D002014 ORTHO05D001958 5.0e-06 55.5 69 39.1
Duzib160G0758 Durio zibethinus HOM05D002014 ORTHO05D001958 5.0e-06 55.5 64 45.3
Duzib235G1176 Durio zibethinus HOM05D002014 ORTHO05D001958 5.0e-06 55.5 49 55.1
FvH4_3g01672 Fragaria vesca HOM05D002014 ORTHO05D001958 5.0e-06 55.5 46 50.0
Glyma.09G006200 Glycine max HOM05D002014 ORTHO05D001958 5.0e-06 55.5 69 42.0
Glyma.15G110600 Glycine max HOM05D002014 ORTHO05D001958 5.0e-06 55.5 69 42.0
Hma1.2p1_0298F.1_g117590 Hydrangea macrophylla HOM05D002014 ORTHO05D001958 5.0e-06 55.5 48 50.0
Lsat_1_v5_gn_7_15340 Lactuca sativa HOM05D002014 ORTHO05D001958 5.0e-06 55.5 68 41.2
TPR.G13107 Trifolium pratense HOM05D002014 ORTHO05D001958 5.0e-06 55.5 88 35.2
arahy.Tifrunner.gnm1.ann1.DPYD9S Arachis hypogaea HOM05D002014 ORTHO05D001958 6.6e-06 55.1 79 34.2
FAN21G0073 Fragaria x ananassa HOM05D002014 ORTHO05D001958 6.6e-06 55.1 46 50.0
Gohir.A05G172300 Gossypium hirsutum HOM05D002014 ORTHO05D001958 6.6e-06 55.1 48 45.8
Gohir.D05G175400 Gossypium hirsutum HOM05D002014 ORTHO05D001958 6.6e-06 55.1 48 45.8
Lsat_1_v5_gn_1_129340 Lactuca sativa HOM05D002014 ORTHO05D001958 6.6e-06 55.1 48 52.1
Lsat_1_v5_gn_7_15460 Lactuca sativa HOM05D002014 ORTHO05D001958 6.6e-06 55.1 68 41.2
MBI10_g43120_MAGBIO Magnolia biondii HOM05D002014 ORTHO05D001958 6.6e-06 55.1 91 35.2
Phvul.006G147300 Phaseolus vulgaris HOM05D002014 ORTHO05D001958 6.6e-06 55.1 138 29.7
Prupe.4G218500 Prunus persica HOM05D002014 ORTHO05D001958 6.6e-06 55.1 128 30.5
Sed0013643 Sechium edule HOM05D002014 ORTHO05D001958 6.6e-06 55.1 48 50.0
Thecc.06G225300 Theobroma cacao HOM05D002014 ORTHO05D001958 6.6e-06 55.1 137 31.4
HPP92_008837 Vanilla planifolia HOM05D002014 ORTHO05D001958 6.6e-06 55.1 51 43.1
Ah.09g234630 Amaranthus hybridus HOM05D002014 ORTHO05D001958 8.6e-06 54.7 51 47.1
Aqoxy1G03430 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 8.6e-06 54.7 69 40.6
arahy.Tifrunner.gnm1.ann1.DG0M13 Arachis hypogaea HOM05D002014 ORTHO05D001958 8.6e-06 54.7 94 31.9
arahy.Tifrunner.gnm1.ann1.F8BHXP Arachis hypogaea HOM05D002014 ORTHO05D001958 8.6e-06 54.7 48 47.9
FAN25G1699 Fragaria x ananassa HOM05D002014 ORTHO05D001958 8.6e-06 54.7 46 50.0
FAN25G2113 Fragaria x ananassa HOM05D002014 ORTHO05D001958 8.6e-06 54.7 130 30.8
Gohir.D05G175500 Gossypium hirsutum HOM05D002014 ORTHO05D001958 8.6e-06 54.7 51 45.1
Gorai.009G180800 Gossypium raimondii HOM05D002014 ORTHO05D001958 8.6e-06 54.7 48 45.8
Gorai.009G180900 Gossypium raimondii HOM05D002014 ORTHO05D001958 8.6e-06 54.7 51 45.1
Peaxi162Scf00178g00710 Petunia axillaris HOM05D002014 ORTHO05D001958 8.6e-06 54.7 47 51.1
Psat0s4506g0080 Pisum sativum HOM05D002014 ORTHO05D001958 8.6e-06 54.7 88 37.5
Potri.004G006900 Populus trichocarpa HOM05D002014 ORTHO05D001958 8.6e-06 54.7 48 50.0


User provided reference genes

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