Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 6.0e-115 417.5 214 100.0
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 1.4e-108 396.4 214 94.9
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.9e-37 159.1 256 47.7
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 6.6e-37 158.3 269 43.9
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 6.2e-35 151.8 264 41.7
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 8.0e-35 151.4 261 43.3
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 1.7e-32 143.7 258 42.2
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 7.0e-31 138.3 267 40.8
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 1.2e-25 120.9 275 34.9
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 3.4e-25 119.4 236 38.1
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 1.7e-24 117.1 254 34.3
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 7.1e-23 111.7 234 36.8
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.6e-22 110.5 267 35.2
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 2.1e-22 110.2 241 38.2
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 3.5e-22 109.4 244 36.1
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 1.3e-21 107.5 260 34.2
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.7e-21 107.1 267 34.8
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.1e-20 104.4 267 34.1
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 2.5e-20 103.2 269 34.2
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 2.5e-20 103.2 264 33.3
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 2.5e-20 103.2 264 33.3
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 2.5e-20 103.2 262 35.5
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 3.3e-20 102.8 266 34.2
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.3e-20 102.8 266 34.2
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 4.3e-20 102.4 257 33.5
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 5.6e-20 102.1 262 34.0
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 9.5e-20 101.3 257 33.1
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 9.5e-20 101.3 241 34.4
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 1.2e-19 100.9 252 35.3
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 2.1e-19 100.1 209 40.2
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 2.1e-19 100.1 247 34.0
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 2.8e-19 99.8 278 31.7
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 4.7e-19 99.0 268 34.7
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 1.1e-18 97.8 279 30.1
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 1.1e-18 97.8 302 29.8
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 1.8e-18 97.1 236 35.2
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 1.8e-18 97.1 260 30.8
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 2.3e-18 96.7 230 37.4
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 2.3e-18 96.7 275 32.7
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 2.3e-18 96.7 232 35.8
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 3.1e-18 96.3 269 33.8
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 4.0e-18 95.9 254 32.7
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 5.2e-18 95.5 252 34.1
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 6.8e-18 95.1 247 35.6
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 6.8e-18 95.1 231 32.9
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 1.2e-17 94.4 210 37.1
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 2.6e-17 93.2 267 33.7
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 4.4e-17 92.4 129 45.0
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 9.9e-17 91.3 249 31.7
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 9.9e-17 91.3 248 32.3
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 1.7e-16 90.5 287 32.1
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 2.9e-16 89.7 269 32.7
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 4.9e-16 89.0 246 33.3
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 4.9e-16 89.0 234 34.2
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 1.1e-15 87.8 198 35.4
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 1.9e-15 87.0 229 34.1
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 2.4e-15 86.7 220 34.1
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 2.4e-15 86.7 242 35.1
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 3.2e-15 86.3 240 32.5
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 4.1e-15 85.9 273 29.3
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.1e-14 83.6 258 32.6
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.1e-14 83.6 258 32.6
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.5e-14 82.8 258 32.6
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 4.6e-14 82.4 261 31.0
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 4.6e-14 82.4 273 30.8
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 6.0e-14 82.0 264 31.1
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 6.0e-14 82.0 280 30.4
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 7.8e-14 81.6 261 32.2
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 7.8e-14 81.6 223 34.1
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.3e-13 80.9 233 33.9
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.3e-13 80.9 286 29.0
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 2.3e-13 80.1 243 31.3
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 2.3e-13 80.1 231 33.8
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 2.3e-13 80.1 240 32.9
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 2.3e-13 80.1 272 29.8
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 3.0e-13 79.7 124 44.4
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 6.6e-13 78.6 137 38.0
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 8.6e-13 78.2 227 34.4
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 8.6e-13 78.2 227 33.9
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 1.1e-12 77.8 233 33.5
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.5e-12 76.6 265 29.8
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 3.3e-12 76.3 162 36.4
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 3.3e-12 76.3 269 33.5
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 4.3e-12 75.9 138 40.6
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 4.3e-12 75.9 250 30.8
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 5.6e-12 75.5 229 31.0
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 7.3e-12 75.1 296 26.0
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 7.3e-12 75.1 266 32.7
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 7.3e-12 75.1 237 32.9
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.6e-11 73.9 129 37.2
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 2.8e-11 73.2 253 30.8
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 2.4e-10 70.1 126 40.5
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 3.1e-10 69.7 134 35.8
HPP92_012357 Vanilla planifolia HOM05D006486 ORTHO05D007888 5.2e-10 68.9 201 31.8
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 2.0e-09 67.0 125 40.8
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 2.0e-09 67.0 253 29.6
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 2.6e-09 66.6 128 34.4
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 2.6e-09 66.6 234 32.5
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 3.4e-09 66.2 134 35.1
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 5.8e-09 65.5 240 31.2
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 7.6e-09 65.1 240 26.7
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 2.2e-08 63.5 241 29.9
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.2e-08 63.5 206 32.0
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.2e-08 63.5 206 32.0
AT4G05018 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 3.8e-08 62.8 140 36.4
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 1.1e-07 61.2 219 30.1
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.4e-07 60.8 125 38.4
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 2.4e-07 60.1 53 64.2
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 4.2e-07 59.3 130 33.8
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 1.2e-06 57.8 134 31.3
Oeu021600.1 Olea europaea HOM05D006486 ORTHO05D007888 2.1e-06 57.0 74 51.4
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 2.1e-06 57.0 247 26.7
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 4.6e-06 55.8 226 29.6


User provided reference genes

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