Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 3.5e-142 508.4 288 100.0
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 3.1e-138 495.4 288 97.6
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 1.6e-54 217.2 268 54.5
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 4.8e-51 205.7 249 54.2
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 7.0e-50 201.8 257 52.1
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 2.7e-46 189.9 243 51.0
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 2.3e-45 186.8 213 51.6
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 3.0e-45 186.4 247 50.6
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 3.0e-45 186.4 236 49.6
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 6.8e-45 185.3 212 50.9
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 1.2e-44 184.5 197 54.8
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 2.0e-44 183.7 209 55.0
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 3.4e-44 183.0 220 50.5
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 5.7e-44 182.2 242 49.6
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 2.8e-43 179.9 210 52.4
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 2.8e-43 179.9 227 49.8
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 3.7e-43 179.5 243 49.4
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 4.8e-43 179.1 224 50.0
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 4.8e-43 179.1 224 50.4
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 6.3e-43 178.7 198 54.0
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 6.3e-43 178.7 198 54.0
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 8.3e-43 178.3 244 47.5
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 1.1e-42 177.9 260 46.9
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 1.1e-42 177.9 191 57.6
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 2.4e-42 176.8 209 53.6
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 3.1e-42 176.4 223 48.0
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 4.1e-42 176.0 210 51.4
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 9.1e-42 174.9 215 49.8
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 3.5e-41 172.9 239 50.2
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 4.5e-41 172.6 215 51.6
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 1.0e-40 171.4 223 51.6
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.3e-40 171.0 198 52.5
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.3e-40 171.0 198 52.5
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 1.3e-40 171.0 242 46.3
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 1.3e-40 171.0 194 54.1
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 1.7e-40 170.6 239 49.8
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 1.7e-40 170.6 167 58.7
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 2.9e-40 169.9 194 53.1
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 3.8e-40 169.5 207 52.7
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 5.0e-40 169.1 208 49.5
PGR042G2784 Punica granatum HOM05D006369 ORTHO05D007764 5.0e-40 169.1 209 52.2
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 6.5e-40 168.7 215 51.2
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 6.5e-40 168.7 248 47.2
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 1.1e-39 167.9 194 53.1
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 1.1e-39 167.9 209 51.7
BcaB01g04960 Brassica carinata HOM05D006369 ORTHO05D007764 1.9e-39 167.2 203 51.7
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 1.9e-39 167.2 244 47.1
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 2.5e-39 166.8 215 48.4
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 4.2e-39 166.0 213 47.4
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 4.2e-39 166.0 215 46.0
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 5.5e-39 165.6 228 45.2
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 7.2e-39 165.2 228 47.4
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 7.2e-39 165.2 252 45.6
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 7.2e-39 165.2 209 51.7
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 1.2e-38 164.5 215 47.9
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 1.6e-38 164.1 215 47.9
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 2.1e-38 163.7 242 44.6
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 3.6e-38 162.9 207 50.2
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 3.6e-38 162.9 197 51.8
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 3.6e-38 162.9 121 66.9
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 4.7e-38 162.5 211 51.2
CSS0035893 Camellia sinensis var. sinensis HOM05D006369 ORTHO05D007764 6.1e-38 162.2 267 43.1
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 6.1e-38 162.2 203 49.3
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 8.0e-38 161.8 213 49.8
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 8.0e-38 161.8 235 46.4
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 1.0e-37 161.4 203 47.8
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 1.0e-37 161.4 202 50.5
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 1.4e-37 161.0 123 63.4
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 1.8e-37 160.6 205 48.3
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 1.8e-37 160.6 115 67.0
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 2.3e-37 160.2 215 47.4
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 2.3e-37 160.2 219 47.0
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 2.3e-37 160.2 203 50.2
vmacro02505 Vaccinium macrocarpon HOM05D006369 ORTHO05D007764 2.3e-37 160.2 189 49.2
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 5.2e-37 159.1 216 50.0
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 1.5e-36 157.5 263 43.3
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 2.0e-36 157.1 248 45.2
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 4.4e-36 156.0 229 43.2
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 4.4e-36 156.0 193 49.2
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 5.7e-36 155.6 174 51.7
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 5.7e-36 155.6 206 48.1
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 7.5e-36 155.2 275 40.7
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 7.5e-36 155.2 208 49.0
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 9.8e-36 154.8 168 51.8
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 1.7e-35 154.1 195 49.7
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 2.2e-35 153.7 207 44.9
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 2.2e-35 153.7 199 51.3
Oeu005324.1 Olea europaea HOM05D006369 ORTHO05D007764 4.9e-35 152.5 172 54.7
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 8.3e-35 151.8 112 65.2
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 1.4e-34 151.0 226 43.4
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 2.4e-34 150.2 252 42.5
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 4.1e-34 149.4 200 47.0
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 9.2e-34 148.3 143 57.3
arahy.Tifrunner.gnm1.ann1.F9R2PF Arachis hypogaea HOM05D006369 ORTHO05D007764 1.2e-33 147.9 290 39.0
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 4.5e-33 146.0 175 51.4
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 6.6e-32 142.1 237 43.0
unitig_747.g21708 Utricularia gibba HOM05D006369 ORTHO05D007764 1.6e-30 137.5 296 37.2
Rhsim13G0016700 Rhododendron simsii HOM05D006369 ORTHO05D007764 3.4e-28 129.8 84 70.2
DCAR_020401 Daucus carota HOM05D006369 ORTHO05D007764 1.8e-26 124.0 211 41.7
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 1.6e-25 120.9 203 43.8
BraA03t10137Z Brassica rapa HOM05D006369 ORTHO05D007764 5.9e-25 119.0 164 47.0
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 1.5e-23 114.4 185 44.3
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 6.2e-22 109.0 205 37.6
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 5.2e-21 105.9 124 46.8
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 4.4e-20 102.8 207 38.2
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 1.5e-15 87.8 117 46.2
Dinv06133 Davidia involucrata HOM05D006369 ORTHO05D007764 4.7e-14 82.8 106 44.3
Cpa.g.sc39.77 Carica papaya HOM05D006369 ORTHO05D007764 1.8e-13 80.9 50 72.0
C03p09390 Brassica napus HOM05D006369 ORTHO05D007764 5.2e-13 79.3 108 50.0
BcaB01g05232 Brassica carinata HOM05D006369 ORTHO05D007764 2.6e-12 77.0 108 49.1
Sabra19G0056200 Salix brachista HOM05D006369 ORTHO05D007764 1.7e-11 74.3 49 79.6
RcHm_v2.0_Chr5g0041771 Rosa chinensis HOM05D006369 ORTHO05D007764 2.9e-11 73.6 60 58.3
COL.COLO4_13442 Corchorus olitorius HOM05D006369 ORTHO05D007764 1.9e-10 70.9 167 36.5
Cre10.g463700 Chlamydomonas reinhardtii HOM05D006369 ORTHO05D007764 1.6e-09 67.8 135 37.8
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 1.9e-07 60.8 52 53.8
BolC3t13440H Brassica oleracea HOM05D006369 ORTHO05D007764 4.3e-07 59.7 112 42.9


User provided reference genes

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