Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6889 Papaver somniferum HOM05D006504 ORTHO05D007867 8.2e-55 217.6 192 100.0
PSO210G7829 Papaver somniferum HOM05D006504 ORTHO05D007867 1.0e-52 210.7 194 98.5
TAR383G0025 Trochodendron aralioides HOM05D006504 ORTHO05D007867 2.5e-35 152.9 92 82.6
GSVIVG01016863001 Vitis vinifera HOM05D006504 ORTHO05D007867 3.2e-35 152.5 93 82.8
Duzib235G1492 Durio zibethinus HOM05D006504 ORTHO05D007867 4.2e-35 152.1 93 79.6
Aqoxy5G00309 Aquilegia oxysepala HOM05D006504 ORTHO05D007867 5.5e-35 151.8 93 78.5
Hma1.2p1_0388F.1_g142400 Hydrangea macrophylla HOM05D006504 ORTHO05D007867 2.1e-34 149.8 93 79.6
Cc05_g02540 Coffea canephora HOM05D006504 ORTHO05D007867 3.6e-34 149.1 93 78.5
Eucgr.F03135 Eucalyptus grandis HOM05D006504 ORTHO05D007867 6.1e-34 148.3 93 78.5
Atru.chr1.3757 Acer truncatum HOM05D006504 ORTHO05D007867 8.0e-34 147.9 93 76.3
Nn8g38840 Nelumbo nucifera HOM05D006504 ORTHO05D007867 8.0e-34 147.9 93 77.4
Cpa.g.sc25.42 Carica papaya HOM05D006504 ORTHO05D007867 5.2e-33 145.2 93 76.3
Gohir.D05G137200 Gossypium hirsutum HOM05D006504 ORTHO05D007867 6.7e-33 144.8 92 76.1
Gorai.009G141600 Gossypium raimondii HOM05D006504 ORTHO05D007867 6.7e-33 144.8 92 76.1
Potri.003G037200 Populus trichocarpa HOM05D006504 ORTHO05D007867 1.5e-32 143.7 93 75.3
Lj5A44T119 Lonicera japonica HOM05D006504 ORTHO05D007867 3.3e-32 142.5 89 76.4
Gohir.A05G135200 Gossypium hirsutum HOM05D006504 ORTHO05D007867 4.4e-32 142.1 92 73.9
Manes.11G025900 Manihot esculenta HOM05D006504 ORTHO05D007867 5.7e-32 141.7 97 73.2
Lsat_1_v5_gn_5_135100 Lactuca sativa HOM05D006504 ORTHO05D007867 7.5e-32 141.4 89 77.5
Manes.04G140200 Manihot esculenta HOM05D006504 ORTHO05D007867 9.7e-32 141.0 93 73.1
TWI31G0577 Tripterygium wilfordii HOM05D006504 ORTHO05D007867 9.7e-32 141.0 93 77.4
Gohir.D10G060350 Gossypium hirsutum HOM05D006504 ORTHO05D007867 2.2e-31 139.8 93 74.2
HanXRQChr12g0360501 Helianthus annuus HOM05D006504 ORTHO05D007867 2.2e-31 139.8 89 76.4
Thecc.06G112500 Theobroma cacao HOM05D006504 ORTHO05D007867 2.2e-31 139.8 93 74.2
Gorai.011G064600 Gossypium raimondii HOM05D006504 ORTHO05D007867 2.8e-31 139.4 93 74.2
CiPaw.01G224400 Carya illinoinensis HOM05D006504 ORTHO05D007867 3.7e-31 139.0 92 73.9
Prupe.3G049000 Prunus persica HOM05D006504 ORTHO05D007867 3.7e-31 139.0 93 72.0
RcHm_v2.0_Chr2g0143361 Rosa chinensis HOM05D006504 ORTHO05D007867 4.8e-31 138.7 93 73.1
CSS0018438 Camellia sinensis var. sinensis HOM05D006504 ORTHO05D007867 8.2e-31 137.9 92 73.9
CsaV3_3G043850 Cucumis sativus L. HOM05D006504 ORTHO05D007867 1.8e-30 136.7 93 71.0
Ciclev10026403m.g Citrus clementina HOM05D006504 ORTHO05D007867 3.1e-30 136.0 93 73.1
Lalb_Chr25g0280741 Lupinus albus HOM05D006504 ORTHO05D007867 3.1e-30 136.0 93 71.0
ECA234G1551 Erigeron canadensis HOM05D000001 ORTHO05D009948 4.1e-30 135.6 89 73.0
arahy.Tifrunner.gnm1.ann1.2CYW67 Arachis hypogaea HOM05D006504 ORTHO05D007867 7.0e-30 134.8 93 69.9
arahy.Tifrunner.gnm1.ann1.S1QT98 Arachis hypogaea HOM05D006504 ORTHO05D007867 7.0e-30 134.8 93 69.9
CAN.G675.25 Capsicum annuum HOM05D006504 ORTHO05D007867 9.1e-30 134.4 93 72.0
Glyma.07G009300 Glycine max HOM05D006504 ORTHO05D007867 1.6e-29 133.7 93 68.8
Lj3g0009120 Lotus japonicus HOM05D006504 ORTHO05D007867 1.6e-29 133.7 93 68.8
FvH4_6g33500 Fragaria vesca HOM05D006504 ORTHO05D007867 2.0e-29 133.3 93 69.9
FAN02G0681 Fragaria x ananassa HOM05D006504 ORTHO05D007867 2.0e-29 133.3 93 71.0
FAN14G5793 Fragaria x ananassa HOM05D006504 ORTHO05D007867 2.0e-29 133.3 93 69.9
Nn5g26799 Nelumbo nucifera HOM05D006504 ORTHO05D007867 2.0e-29 133.3 78 84.6
QL05p000665 Quercus lobata HOM05D006504 ORTHO05D007867 2.0e-29 133.3 92 71.7
Solyc02g069520.2 Solanum lycopersicum HOM05D006504 ORTHO05D007867 2.0e-29 133.3 93 69.9
Sopen02g018660 Solanum pennellii HOM05D006504 ORTHO05D007867 2.0e-29 133.3 93 69.9
Glyma.08G192500 Glycine max HOM05D006504 ORTHO05D007867 2.7e-29 132.9 93 68.8
CDE04G1380 Ceratophyllum demersum HOM05D006504 ORTHO05D007867 3.5e-29 132.5 93 69.9
QL05p000757 Quercus lobata HOM05D006504 ORTHO05D007867 4.5e-29 132.1 92 70.7
Nn8g38837 Nelumbo nucifera HOM05D006504 ORTHO05D007867 7.7e-29 131.3 78 83.3
VMungo0331G1418 Vigna mungo HOM05D006504 ORTHO05D007867 1.0e-28 131.0 93 68.8
FAN09G0296 Fragaria x ananassa HOM05D006504 ORTHO05D007867 1.3e-28 130.6 93 68.8
Medtr8g017180 Medicago truncatula HOM05D006504 ORTHO05D007867 1.3e-28 130.6 93 67.7
Peaxi162Scf00195g00313 Petunia axillaris HOM05D006504 ORTHO05D007867 2.2e-28 129.8 91 70.3
THA.LOC104822636 Tarenaya hassleriana HOM05D006504 ORTHO05D007867 2.9e-28 129.4 93 68.8
FAN21G2275 Fragaria x ananassa HOM05D006504 ORTHO05D007867 3.8e-28 129.0 92 69.6
PGR102G0591 Punica granatum HOM05D006504 ORTHO05D007867 3.8e-28 129.0 91 73.6
HPP92_023888 Vanilla planifolia HOM05D006504 ORTHO05D007867 3.8e-28 129.0 93 62.4
Carub.0001s4357 Capsella rubella HOM05D006504 ORTHO05D007867 6.5e-28 128.3 93 65.6
Sp1g40740 Schrenkiella parvula HOM05D006504 ORTHO05D007867 6.5e-28 128.3 93 66.7
TPR.G37598 Trifolium pratense HOM05D006504 ORTHO05D007867 1.1e-27 127.5 93 65.6
arahy.Tifrunner.gnm1.ann1.Y1EG1J Arachis hypogaea HOM05D006504 ORTHO05D007867 1.5e-27 127.1 85 71.8
MSTRG.22579 Avicennia marina HOM05D006504 ORTHO05D007867 2.5e-27 126.3 91 68.1
COL.COLO4_30670 Corchorus olitorius HOM05D006504 ORTHO05D007867 4.2e-27 125.6 83 73.5
AL1G63070 Arabidopsis lyrata HOM05D006504 ORTHO05D007867 7.2e-27 124.8 89 66.3
Psat4g188440 Pisum sativum HOM05D006504 ORTHO05D007867 9.4e-27 124.4 93 63.4
ATR0661G108 Amborella trichopoda HOM05D006504 ORTHO05D007867 1.6e-26 123.6 88 67.0
MD09G1192700 Malus domestica HOM05D006504 ORTHO05D007867 1.6e-26 123.6 79 77.2
AT1G55080 Arabidopsis thaliana HOM05D006504 ORTHO05D007867 2.1e-26 123.2 93 62.4
Os01g0501000 Oryza sativa ssp. japonica HOM05D006504 ORTHO05D007867 2.1e-26 123.2 92 64.1
CARHR044670 Cardamine hirsuta HOM05D006504 ORTHO05D007867 4.7e-26 122.1 93 63.4
MELO3C030574.2 Cucumis melo HOM05D006504 ORTHO05D007867 1.0e-25 120.9 78 75.6
BcaB04g17003 Brassica carinata HOM05D006504 ORTHO05D007867 1.8e-25 120.2 93 64.5
BolC3t21536H Brassica oleracea HOM05D006504 ORTHO05D007867 4.0e-25 119.0 93 63.4
BraA08t32155Z Brassica rapa HOM05D006504 ORTHO05D007867 5.2e-25 118.6 93 63.4
Cfa003580 Carpinus fangiana HOM05D006504 ORTHO05D007867 6.8e-25 118.2 82 70.7
BcaC01g01455 Brassica carinata HOM05D006504 ORTHO05D007867 8.8e-25 117.9 93 62.4
PGSC0003DMG400021202 Solanum tuberosum HOM05D006504 ORTHO05D007867 8.8e-25 117.9 84 69.0
Migut.I01030 Erythranthe guttata HOM05D006504 ORTHO05D007867 1.5e-24 117.1 88 64.8
Sc12g0010270 Simmondsia chinensis HOM05D006504 ORTHO05D007867 3.4e-24 115.9 81 67.9
Ah.08g216230 Amaranthus hybridus HOM05D006504 ORTHO05D007867 5.7e-24 115.2 85 63.5
CDE06G0601 Ceratophyllum demersum HOM05D006504 ORTHO05D007867 7.5e-24 114.8 79 69.6
HPP92_023833 Vanilla planifolia HOM05D006504 ORTHO05D007867 9.8e-24 114.4 88 58.0
ATR0800G060 Amborella trichopoda HOM05D006504 ORTHO05D007867 2.8e-23 112.8 77 71.4
arahy.Tifrunner.gnm1.ann1.IBA4C6 Arachis hypogaea HOM05D006504 ORTHO05D007867 6.3e-23 111.7 82 65.9
Rhsim12G0206400 Rhododendron simsii HOM05D006504 ORTHO05D007867 1.8e-22 110.2 106 59.4
A08p01030 Brassica napus HOM05D001264 ORTHO05D007867 9.1e-22 107.8 79 69.6
C03p92210 Brassica napus HOM05D001264 ORTHO05D007867 9.1e-22 107.8 79 69.6
Aa31LG10G870 Aethionema arabicum HOM05D006504 ORTHO05D007867 2.0e-21 106.7 120 49.2
BolC6t36770H Brassica oleracea HOM05D006504 ORTHO05D007867 1.3e-20 104.0 93 60.2
BcaB03g13872 Brassica carinata HOM05D006504 ORTHO05D007867 5.0e-20 102.1 91 56.0
BraA05t20659Z Brassica rapa HOM05D006504 ORTHO05D007867 6.6e-20 101.7 93 59.1
SEGI_28258 Sequoiadendron giganteum HOM05D006504 ORTHO05D007867 3.3e-19 99.4 93 54.8
A05p17670 Brassica napus HOM05D006504 ORTHO05D007867 9.5e-19 97.8 79 68.4
A07p10460 Brassica napus HOM05D006504 ORTHO05D007867 1.2e-18 97.4 91 50.5
BraA07t28846Z Brassica rapa HOM05D006504 ORTHO05D007867 1.2e-18 97.4 91 50.5
Mapoly0004s0244 Marchantia polymorpha HOM05D006504 ORTHO05D007867 1.2e-18 97.4 89 55.1
C06p15780 Brassica napus HOM05D001264 ORTHO05D001167 1.6e-18 97.1 79 68.4
BcaC06g35444 Brassica carinata HOM05D006504 ORTHO05D007867 4.7e-18 95.5 91 49.5
C07p16100 Brassica napus HOM05D006504 ORTHO05D007867 4.7e-18 95.5 91 49.5
BolC7t42095H Brassica oleracea HOM05D006504 ORTHO05D007867 4.7e-18 95.5 91 49.5
Carub.0001s2784 Capsella rubella HOM05D006504 ORTHO05D007867 4.0e-17 92.4 89 55.1
Gohir.A10G058600 Gossypium hirsutum HOM05D006504 ORTHO05D007867 5.2e-17 92.0 65 70.8
QL05p000679 Quercus lobata HOM05D006504 ORTHO05D007867 5.2e-17 92.0 83 62.7
QL05p000687 Quercus lobata HOM05D006504 ORTHO05D007867 5.2e-17 92.0 83 62.7
BcaC08g44177 Brassica carinata HOM05D001264 ORTHO05D001167 8.9e-17 91.3 79 65.8
ClCG07G013760 Citrullus lanatus HOM05D006504 ORTHO05D007867 1.2e-16 90.9 81 60.5
SGA_v2.0_scaffold127G34055 Striga asiatica HOM05D006504 ORTHO05D007867 4.1e-14 82.4 66 65.2
vmacro17023 Vaccinium macrocarpon HOM05D006504 ORTHO05D007867 4.1e-14 82.4 50 78.0
Zm00001eb066180 Zea mays HOM05D006504 ORTHO05D007867 7.0e-14 81.6 57 70.2
Sp3g12060 Schrenkiella parvula HOM05D006504 ORTHO05D007867 1.6e-13 80.5 79 54.4
AL1G43430 Arabidopsis lyrata HOM05D006504 ORTHO05D007867 7.8e-13 78.2 74 56.8
TPR.G19289 Trifolium pratense HOM05D006504 ORTHO05D007867 2.3e-12 76.6 93 46.2
SMO358G0601 Selaginella moellendorffii HOM05D006504 ORTHO05D007867 2.9e-12 76.3 88 46.6
Haze_15959 Corylus avellana HOM05D006504 ORTHO05D007867 2.5e-11 73.2 48 70.8
Nitab4.5_0001219g0120 Nicotiana tabacum HOM05D006504 ORTHO05D007867 4.3e-11 72.4 85 50.6
Thhalv10022201m.g Eutrema salsugineum HOM05D006504 ORTHO05D007867 2.1e-10 70.1 68 55.9
DCAR_007625 Daucus carota HOM05D006504 ORTHO05D007867 3.1e-09 66.2 82 45.1
Pp3c21_4920 Physcomitrium patens HOM05D006504 ORTHO05D007867 1.5e-08 63.9 89 39.3
SGA_v2.0_scaffold464G52010 Striga asiatica HOM05D006504 ORTHO05D007867 2.2e-07 60.1 33 84.8
AagrBONN_evm.TU.Sc2ySwM_344.1668 Anthoceros agrestis HOM05D006504 ORTHO05D007867 5.4e-06 55.5 56 44.6


User provided reference genes

Program Settings