Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6794 Papaver somniferum HOM05D004546 ORTHO05D005419 3.5e-242 841.3 446 100.0
PSO210G7371 Papaver somniferum HOM05D004546 ORTHO05D005419 3.5e-234 814.7 443 97.5
Aqoxy6G00209 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 9.5e-139 497.7 440 58.2
Hma1.2p1_1482F.1_g286200 Hydrangea macrophylla HOM05D004546 ORTHO05D005419 8.4e-127 458.0 437 56.3
TAR628G0514 Trochodendron aralioides HOM05D004546 ORTHO05D005419 2.4e-126 456.4 393 60.8
vmacro01757 Vaccinium macrocarpon HOM05D004546 ORTHO05D005419 1.6e-122 443.7 435 53.6
CSS0049092 Camellia sinensis var. sinensis HOM05D004546 ORTHO05D005419 4.0e-121 439.1 416 56.2
PGSC0003DMG400010002 Solanum tuberosum HOM05D004546 ORTHO05D005419 4.0e-121 439.1 439 52.2
Cfa005513 Carpinus fangiana HOM05D004546 ORTHO05D005419 5.8e-120 435.3 432 54.4
Rhsim09G0016100 Rhododendron simsii HOM05D004546 ORTHO05D005419 2.9e-119 433.0 424 55.2
GSVIVG01035964001 Vitis vinifera HOM05D004546 ORTHO05D005419 4.9e-119 432.2 439 54.2
Rhsim11G0128800 Rhododendron simsii HOM05D004546 ORTHO05D005419 2.4e-118 429.9 437 54.5
Duzib177G0829 Durio zibethinus HOM05D004546 ORTHO05D005419 3.9e-116 422.5 436 53.9
Thecc.05G227600 Theobroma cacao HOM05D004546 ORTHO05D005419 6.2e-114 415.2 436 52.5
Lalb_Chr12g0204461 Lupinus albus HOM05D004546 ORTHO05D005419 4.9e-111 405.6 438 51.8
Sc11g0004500 Simmondsia chinensis HOM05D004546 ORTHO05D005419 1.5e-107 394.0 435 47.6
Potri.017G043000 Populus trichocarpa HOM05D004546 ORTHO05D005419 1.3e-106 391.0 436 50.5
Potri.007G116200 Populus trichocarpa HOM05D004546 ORTHO05D005419 1.6e-106 390.6 432 51.2
Prupe.1G570900 Prunus persica HOM05D004546 ORTHO05D005419 2.8e-106 389.8 432 51.6
Migut.B00830 Erythranthe guttata HOM05D004546 ORTHO05D005419 8.1e-106 388.3 436 49.1
Sabra17G0029200 Salix brachista HOM05D004546 ORTHO05D005419 8.1e-106 388.3 436 50.5
Actinidia00204 Actinidia chinensis HOM05D004546 ORTHO05D005419 1.1e-105 387.9 440 49.8
Sed0013794 Sechium edule HOM05D004546 ORTHO05D005419 2.4e-105 386.7 430 48.6
Haze_01703 Corylus avellana HOM05D004546 ORTHO05D005419 2.0e-104 383.6 537 43.2
CiPaw.05G045000 Carya illinoinensis HOM05D004546 ORTHO05D005419 3.4e-104 382.9 375 54.9
Gorai.001G269700 Gossypium raimondii HOM05D004546 ORTHO05D005419 5.8e-104 382.1 436 51.1
Sopen10g008970 Solanum pennellii HOM05D004546 ORTHO05D005419 1.3e-103 380.9 439 47.6
DCAR_006706 Daucus carota HOM05D004546 ORTHO05D005419 4.9e-103 379.0 431 49.7
EL10Ac2g02703 Beta vulgaris HOM05D004546 ORTHO05D005419 1.9e-102 377.1 439 46.0
MSTRG.16518 Avicennia marina HOM05D004546 ORTHO05D005419 9.3e-102 374.8 433 47.1
Ciclev10015244m.g Citrus clementina HOM05D004546 ORTHO05D005419 6.7e-100 368.6 372 54.0
Atru.chr8.1488 Acer truncatum HOM05D004546 ORTHO05D005419 1.9e-99 367.1 434 47.7
Ah.14g086060 Amaranthus hybridus HOM05D004546 ORTHO05D005419 5.7e-99 365.5 430 47.2
CsaV3_5G025650 Cucumis sativus L. HOM05D004546 ORTHO05D005419 9.6e-99 364.8 437 46.5
ECA234G1828 Erigeron canadensis HOM05D004546 ORTHO05D005419 4.8e-98 362.5 440 45.9
Peaxi162Scf00152g01427 Petunia axillaris HOM05D004546 ORTHO05D005419 8.2e-98 361.7 433 46.7
FAN02G2941 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.4e-97 360.9 435 46.7
Phvul.002G249700 Phaseolus vulgaris HOM05D004546 ORTHO05D005419 1.8e-97 360.5 441 46.0
CARHR052070 Cardamine hirsuta HOM05D004546 ORTHO05D005419 2.4e-97 360.1 436 45.9
Solyc10g019040.2 Solanum lycopersicum HOM05D004546 ORTHO05D005419 5.3e-97 359.0 439 45.8
SHI16664 Sapria himalayana HOM05D004546 ORTHO05D005419 6.9e-97 358.6 430 47.2
Rhsim09G0048700 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.5e-96 357.5 321 59.2
Gohir.D06G191600 Gossypium hirsutum HOM05D004546 ORTHO05D005419 2.0e-96 357.1 436 48.6
Lj5A252T47 Lonicera japonica HOM05D004546 ORTHO05D005419 2.0e-96 357.1 439 47.4
Glyma.05G169000 Glycine max HOM05D004546 ORTHO05D005419 3.4e-96 356.3 441 46.5
Dinv24291 Davidia involucrata HOM05D004546 ORTHO05D005419 4.5e-96 355.9 439 46.7
VMungo0251G0798 Vigna mungo HOM05D004546 ORTHO05D005419 4.5e-96 355.9 469 43.9
RcHm_v2.0_Chr7g0222021 Rosa chinensis HOM05D004546 ORTHO05D005419 1.0e-95 354.8 435 46.2
Sp2g03510 Schrenkiella parvula HOM05D004546 ORTHO05D005419 1.7e-95 354.0 436 45.2
Eucgr.G00575 Eucalyptus grandis HOM05D004546 ORTHO05D005419 1.1e-94 351.3 436 44.0
Cc02_g22580 Coffea canephora HOM05D004546 ORTHO05D005419 1.4e-94 350.9 439 43.7
QL02p098920 Quercus lobata HOM05D004546 ORTHO05D005419 1.9e-94 350.5 433 47.8
Nitab4.5_0000753g0130 Nicotiana tabacum HOM05D004546 ORTHO05D005419 3.2e-94 349.7 429 44.5
FvH4_6g25020 Fragaria vesca HOM05D004546 ORTHO05D005419 7.1e-94 348.6 435 44.8
ClCG03G000010 Citrullus lanatus HOM05D004546 ORTHO05D005419 9.3e-94 348.2 473 43.1
Nitab4.5_0003652g0050 Nicotiana tabacum HOM05D004546 ORTHO05D005419 9.3e-94 348.2 423 44.7
THA.LOC104809617 Tarenaya hassleriana HOM05D004546 ORTHO05D005419 1.6e-93 347.4 436 42.7
Aa31LG2G9580 Aethionema arabicum HOM05D004640 ORTHO05D005489 4.6e-93 345.9 424 44.3
CAN.G1330.18 Capsicum annuum HOM05D004546 ORTHO05D005419 3.9e-92 342.8 439 44.2
Lsat_1_v5_gn_5_105520 Lactuca sativa HOM05D004546 ORTHO05D005419 1.5e-91 340.9 438 44.1
Carub.0002s0420 Capsella rubella HOM05D004546 ORTHO05D005419 8.2e-90 335.1 436 43.3
HanXRQChr10g0290511 Helianthus annuus HOM05D004546 ORTHO05D005419 8.2e-90 335.1 441 45.4
MD08G1233000 Malus domestica HOM05D004546 ORTHO05D005419 1.4e-89 334.3 440 44.8
AT1G61000 Arabidopsis thaliana HOM05D004546 ORTHO05D005419 1.8e-89 334.0 436 42.0
BolC4t24246H Brassica oleracea HOM05D004546 ORTHO05D005419 6.9e-89 332.0 445 43.4
FAN05G4088 Fragaria x ananassa HOM05D004546 ORTHO05D005419 4.5e-88 329.3 457 42.2
SGA_v2.0_scaffold110G31325 Striga asiatica HOM05D004546 ORTHO05D005419 4.5e-88 329.3 442 43.2
FAN14G0315 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.3e-87 327.8 462 42.0
Lj4g0018170 Lotus japonicus HOM05D004546 ORTHO05D005419 2.9e-87 326.6 434 44.7
C03p25600 Brassica napus HOM05D004546 ORTHO05D005419 5.0e-87 325.9 445 42.9
TPR.G23101 Trifolium pratense HOM05D004546 ORTHO05D005419 1.9e-86 323.9 440 45.5
Gorai.010G224800 Gossypium raimondii HOM05D004546 ORTHO05D005419 2.5e-86 323.6 436 45.4
Sabra07G0094500 Salix brachista HOM05D004546 ORTHO05D005419 9.4e-86 321.6 591 37.1
AUR62014224 Chenopodium quinoa HOM05D004546 ORTHO05D005419 1.6e-85 320.9 433 42.3
BolC3t14948H Brassica oleracea HOM05D004546 ORTHO05D005419 6.1e-85 318.9 454 41.9
MD15G1425300 Malus domestica HOM05D004546 ORTHO05D005419 1.0e-84 318.2 432 44.0
A03p21620 Brassica napus HOM05D004546 ORTHO05D005419 1.4e-84 317.8 454 41.4
BraA03t11397Z Brassica rapa HOM05D004546 ORTHO05D005419 1.4e-84 317.8 454 41.4
Gohir.A06G184800 Gossypium hirsutum HOM05D004546 ORTHO05D005419 1.4e-84 317.8 414 46.6
GSVIVG01022895001 Vitis vinifera HOM05D004546 ORTHO05D005419 1.8e-84 317.4 439 43.3
Manes.10G066500 Manihot esculenta HOM05D004546 ORTHO05D005419 6.7e-84 315.5 432 44.0
CANSAT54G1257 Cannabis sativa HOM05D004546 ORTHO05D005419 8.8e-84 315.1 368 47.8
AUR62041118 Chenopodium quinoa HOM05D004546 ORTHO05D005419 8.8e-84 315.1 428 42.3
Medtr8g088840 Medicago truncatula HOM05D004546 ORTHO05D005419 1.5e-83 314.3 434 44.9
Thhalv10023463m.g Eutrema salsugineum HOM05D004546 ORTHO05D005419 7.4e-83 312.0 436 41.3
arahy.Tifrunner.gnm1.ann1.SB4BQ5 Arachis hypogaea HOM05D004546 ORTHO05D005419 1.7e-82 310.8 439 42.8
C04p25630 Brassica napus HOM05D004546 ORTHO05D005419 6.3e-82 308.9 494 38.7
HPP92_000323 Vanilla planifolia HOM05D004546 ORTHO05D005419 1.8e-81 307.4 438 41.6
COL.COLO4_05853 Corchorus olitorius HOM05D004546 ORTHO05D005294 1.5e-80 304.3 440 43.2
Gohir.D07G234200 Gossypium hirsutum HOM05D004546 ORTHO05D005419 2.6e-80 303.5 436 43.1
TWI59G0103 Tripterygium wilfordii HOM05D004546 ORTHO05D005419 2.6e-80 303.5 440 41.6
CDE08G0494 Ceratophyllum demersum HOM05D004546 ORTHO05D005419 4.5e-80 302.8 413 43.6
arahy.Tifrunner.gnm1.ann1.QA5S84 Arachis hypogaea HOM05D004546 ORTHO05D005419 1.1e-78 298.1 434 42.4
FvH4_7g06682 Fragaria vesca HOM05D004546 ORTHO05D005419 1.1e-78 298.1 441 40.1
Cpa.g.sc8.264 Carica papaya HOM05D004546 ORTHO05D005419 5.5e-78 295.8 301 51.5
Nn1g08777 Nelumbo nucifera HOM05D004546 ORTHO05D005419 5.5e-78 295.8 350 50.6
Psat7g062000 Pisum sativum HOM05D004546 ORTHO05D005419 9.4e-78 295.0 433 41.8
FAN06G4932 Fragaria x ananassa HOM05D004546 ORTHO05D005419 2.7e-77 293.5 441 39.9
Peaxi162Scf00152g01529 Petunia axillaris HOM05D004546 ORTHO05D005419 2.7e-77 293.5 441 41.0
PGR042G1236 Punica granatum HOM05D004546 ORTHO05D005419 1.4e-76 291.2 436 39.4
Atru.chr13.2649 Acer truncatum HOM05D004546 ORTHO05D005419 3.9e-76 289.7 348 47.4
Hund15499 Selenicereus undatus HOM05D004546 ORTHO05D005419 3.9e-76 289.7 323 48.3
Gohir.A07G227000 Gossypium hirsutum HOM05D004546 ORTHO05D005419 4.4e-75 286.2 414 43.5
Ca_17808_v3 Cicer arietinum L. HOM05D004546 ORTHO05D005419 7.4e-75 285.4 440 40.9
BcaC02g10598 Brassica carinata HOM05D004546 ORTHO05D005419 1.2e-72 278.1 461 38.0
PSO210G1504 Papaver somniferum HOM05D004546 ORTHO05D005419 3.5e-72 276.6 155 96.1
Medtr4g049650 Medicago truncatula HOM05D004546 ORTHO05D005419 3.6e-69 266.5 398 41.2
Oeu033122.2 Olea europaea HOM05D004546 ORTHO05D005419 6.7e-68 262.3 246 53.3
RcHm_v2.0_Chr1g0336301 Rosa chinensis HOM05D004546 ORTHO05D005419 1.5e-67 261.2 363 40.5
Carub.0002s0419 Capsella rubella HOM05D004546 ORTHO05D005419 2.6e-67 260.4 456 39.3
Medtr8g088800 Medicago truncatula HOM05D004546 ORTHO05D005419 4.4e-67 259.6 417 40.3
COL.COLO4_10577 Corchorus olitorius HOM05D004546 ORTHO05D005419 3.5e-64 250.0 444 38.7
Os03g0577100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 1.3e-63 248.1 446 35.2
TPR.G28353 Trifolium pratense HOM05D004546 ORTHO05D005419 1.2e-61 241.5 286 45.1
Os08g0163100 Oryza sativa ssp. japonica HOM05D004546 ORTHO05D005419 1.2e-56 224.9 446 33.0
VMungo0251G0767 Vigna mungo HOM05D004546 ORTHO05D005419 4.5e-56 223.0 462 34.8
AL2G15450 Arabidopsis lyrata HOM05D004546 ORTHO05D005419 9.4e-54 215.3 304 42.8
Lsat_1_v5_gn_8_80961 Lactuca sativa HOM05D004546 ORTHO05D005419 5.7e-51 206.1 230 48.7
Eucgr.L03482 Eucalyptus grandis HOM05D004546 ORTHO05D005419 8.3e-50 202.2 219 47.5
ATR0177G064 Amborella trichopoda HOM05D004546 ORTHO05D005419 1.1e-49 201.8 336 37.8
FAN03G2280 Fragaria x ananassa HOM05D004546 ORTHO05D005419 1.8e-49 201.1 614 27.5
Aqoxy7G01614 Aquilegia oxysepala HOM05D004546 ORTHO05D005419 3.1e-49 200.3 389 36.0
unitig_8.g2954 Utricularia gibba HOM05D004546 ORTHO05D005419 3.1e-49 200.3 440 32.0
TPR.G38758 Trifolium pratense HOM05D004546 ORTHO05D005419 5.4e-49 199.5 281 40.9
Rhsim09G0048900 Rhododendron simsii HOM05D004546 ORTHO05D005419 2.5e-46 190.7 410 33.9
COL.COLO4_13071 Corchorus olitorius HOM05D004546 ORTHO05D005419 2.6e-43 180.6 205 46.3
SEGI_32079 Sequoiadendron giganteum HOM05D004546 ORTHO05D005419 1.7e-42 177.9 435 32.4
MELO3C002916.2 Cucumis melo HOM05D004546 ORTHO05D005419 4.1e-41 173.3 221 45.7
TPR.G31804 Trifolium pratense HOM05D004546 ORTHO05D005419 3.4e-35 153.7 215 46.0
Oeu027800.1 Olea europaea HOM05D004546 ORTHO05D005419 1.7e-34 151.4 174 50.0
Zm00001eb064460 Zea mays HOM05D004546 ORTHO05D005419 2.3e-31 141.0 391 28.4
C05p50930 Brassica napus HOM05D004546 ORTHO05D005419 3.0e-31 140.6 205 36.1
TPR.G37878 Trifolium pratense HOM05D004546 ORTHO05D005419 2.2e-26 124.4 157 42.7
Atru.chr4.610 Acer truncatum HOM05D004546 ORTHO05D005419 3.7e-26 123.6 131 47.3
FAN10G1533 Fragaria x ananassa HOM05D004546 ORTHO05D005419 9.2e-25 119.0 436 26.6
AagrBONN_evm.TU.Sc2ySwM_117.2656 Anthoceros agrestis HOM05D004546 ORTHO05D005419 1.0e-23 115.5 253 32.0
Rhsim09G0048500 Rhododendron simsii HOM05D004546 ORTHO05D005419 7.3e-22 109.4 74 66.2
Hund15500 Selenicereus undatus HOM05D004546 ORTHO05D005419 1.2e-21 108.6 137 48.9
Rhsim09G0049000 Rhododendron simsii HOM05D004546 ORTHO05D005419 4.7e-21 106.7 76 64.5
RhsimUnG0234900 Rhododendron simsii HOM05D004546 ORTHO05D005419 1.8e-20 104.8 76 63.2
C05p50920 Brassica napus HOM05D004546 ORTHO05D005419 2.9e-18 97.4 154 42.9
CAN.G1882.2 Capsicum annuum HOM05D004546 ORTHO05D005419 8.4e-18 95.9 112 50.9
MD08G1232500 Malus domestica HOM05D004546 ORTHO05D005419 1.6e-16 91.7 99 46.5
TPR.G37996 Trifolium pratense HOM05D004546 ORTHO05D005419 1.6e-16 91.7 183 36.1
CAN.G1882.3 Capsicum annuum HOM05D004546 ORTHO05D005419 5.1e-15 86.7 81 55.6
Mapoly0004s0096 Marchantia polymorpha HOM05D004546 ORTHO05D005419 7.3e-14 82.8 208 30.3
TPR.G7268 Trifolium pratense HOM05D004546 ORTHO05D005419 7.3e-14 82.8 74 56.8
Atru.chr4.605 Acer truncatum HOM05D005324 ORTHO05D001185 8.9e-12 75.9 94 45.7
MCO07G624 Micromonas commoda HOM05D004546 ORTHO05D005419 8.4e-10 69.3 137 32.8
TPR.G18400 Trifolium pratense HOM05D004546 ORTHO05D005419 7.1e-09 66.2 66 50.0
Pp3c12_6220 Physcomitrium patens HOM05D004546 ORTHO05D005419 1.6e-08 65.1 424 22.6
MBI08_g15045_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D010248 7.8e-08 62.8 83 47.0
MBI17_g42496_MAGBIO Magnolia biondii HOM05D004546 ORTHO05D005419 7.8e-08 62.8 77 39.0
PRCOL_00002550 Prasinoderma coloniale HOM05D004546 ORTHO05D005419 7.8e-08 62.8 183 27.3


User provided reference genes

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