Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6602 Papaver somniferum HOM05D007775 ORTHO05D009858 1.4e-170 602.8 298 100.0
MBI19_g01943_MAGBIO Magnolia biondii HOM05D007775 ORTHO05D009858 1.8e-77 293.5 306 54.2
TAR362G1316 Trochodendron aralioides HOM05D007775 ORTHO05D009858 2.6e-76 289.7 291 54.0
Dinv38311 Davidia involucrata HOM05D007775 ORTHO05D009858 3.4e-68 262.7 293 47.4
Cfa015361 Carpinus fangiana HOM05D007775 ORTHO05D009858 3.0e-64 249.6 297 45.8
Rhsim04G0218300 Rhododendron simsii HOM05D007775 ORTHO05D009858 6.7e-64 248.4 292 45.5
Actinidia40242 Actinidia chinensis HOM05D007775 ORTHO05D009858 1.1e-63 247.7 297 45.5
CiPaw.02G085200 Carya illinoinensis HOM05D007775 ORTHO05D009858 2.0e-63 246.9 280 46.8
Potri.008G215200 Populus trichocarpa HOM05D007775 ORTHO05D009858 1.3e-62 244.2 299 44.1
Nn3g16301 Nelumbo nucifera HOM05D007775 ORTHO05D009858 1.2e-60 237.7 291 46.4
QL06p007731 Quercus lobata HOM05D007775 ORTHO05D009858 1.6e-60 237.3 309 44.0
TWI09G0118 Tripterygium wilfordii HOM05D007775 ORTHO05D009858 7.7e-60 235.0 301 43.9
Ciclev10005542m.g Citrus clementina HOM05D007775 ORTHO05D009858 1.1e-58 231.1 286 45.8
PGR031G0649 Punica granatum HOM05D007775 ORTHO05D009858 2.5e-58 229.9 301 44.2
Cc03_g02150 Coffea canephora HOM05D007775 ORTHO05D009858 5.5e-58 228.8 287 41.1
COL.COLO4_13909 Corchorus olitorius HOM05D007775 ORTHO05D009858 5.5e-58 228.8 295 44.1
Sabra08G0155600 Salix brachista HOM05D007775 ORTHO05D009858 9.4e-58 228.0 299 43.5
Thecc.04G279800 Theobroma cacao HOM05D007775 ORTHO05D009858 1.6e-57 227.3 295 43.4
Prupe.1G140100 Prunus persica HOM05D007775 ORTHO05D009858 2.1e-57 226.9 291 45.0
Gohir.D10G168200 Gossypium hirsutum HOM05D007775 ORTHO05D009858 8.0e-57 224.9 289 43.9
ClCG06G005300 Citrullus lanatus HOM05D007775 ORTHO05D009858 1.4e-56 224.2 281 45.2
MELO3C021348.2 Cucumis melo HOM05D007775 ORTHO05D009858 1.4e-56 224.2 285 44.9
Gorai.011G187800 Gossypium raimondii HOM05D007775 ORTHO05D009858 1.8e-56 223.8 292 42.8
Solyc06g054580.4 Solanum lycopersicum HOM05D007775 ORTHO05D009858 1.1e-55 221.1 284 42.3
Aa31LG5G20500 Aethionema arabicum HOM05D007775 ORTHO05D009858 2.0e-55 220.3 298 44.0
PGSC0003DMG400030783 Solanum tuberosum HOM05D007775 ORTHO05D009858 2.0e-55 220.3 283 43.1
CsaV3_6G017340 Cucumis sativus L. HOM05D007775 ORTHO05D009858 7.5e-55 218.4 303 42.9
Sopen06g019650 Solanum pennellii HOM05D007775 ORTHO05D009858 7.5e-55 218.4 284 41.9
RcHm_v2.0_Chr4g0421471 Rosa chinensis HOM05D007775 ORTHO05D009858 9.7e-55 218.0 289 42.9
Lj6A671T60 Lonicera japonica HOM05D007775 ORTHO05D009858 1.7e-54 217.2 289 43.6
Lsat_1_v5_gn_5_52881 Lactuca sativa HOM05D007775 ORTHO05D009858 1.8e-53 213.8 295 41.4
Ah.13g074550 Amaranthus hybridus HOM05D007775 ORTHO05D009858 3.1e-53 213.0 300 42.0
GSVIVG01017782001 Vitis vinifera HOM05D007775 ORTHO05D009858 3.1e-53 213.0 280 43.9
FAN07G2931 Fragaria x ananassa HOM05D007775 ORTHO05D009858 4.1e-53 212.6 291 42.3
FvH4_4g17570 Fragaria vesca HOM05D007775 ORTHO05D009858 7.0e-53 211.8 279 43.4
AT2G39100 Arabidopsis thaliana HOM05D007775 ORTHO05D009858 2.0e-52 210.3 298 41.6
Atru.chr4.2786 Acer truncatum HOM05D007775 ORTHO05D009858 5.9e-52 208.8 259 43.6
MD13G1171700 Malus domestica HOM05D007775 ORTHO05D009858 1.3e-51 207.6 293 42.7
THA.LOC104820248 Tarenaya hassleriana HOM05D007775 ORTHO05D009858 1.3e-51 207.6 293 41.0
Carub.0004s2115 Capsella rubella HOM05D007775 ORTHO05D009858 2.2e-51 206.8 282 41.8
Duzib151G1205 Durio zibethinus HOM05D007775 ORTHO05D009858 6.5e-51 205.3 278 43.2
CANSAT78G0244 Cannabis sativa HOM05D007775 ORTHO05D009858 1.9e-50 203.8 281 44.5
Nitab4.5_0001459g0060 Nicotiana tabacum HOM05D007775 ORTHO05D009858 1.9e-50 203.8 266 43.2
Sp4g21450 Schrenkiella parvula HOM05D007775 ORTHO05D009858 2.5e-50 203.4 293 42.0
Eucgr.B01278 Eucalyptus grandis HOM05D007775 ORTHO05D009858 3.2e-50 203.0 285 42.1
Oeu021116.1 Olea europaea HOM05D007775 ORTHO05D009858 4.2e-50 202.6 277 41.2
HanXRQChr03g0080871 Helianthus annuus HOM05D007775 ORTHO05D009858 1.2e-49 201.1 313 39.9
Nitab4.5_0002148g0040 Nicotiana tabacum HOM05D007775 ORTHO05D009858 1.2e-49 201.1 265 43.0
Thhalv10017000m.g Eutrema salsugineum HOM05D007775 ORTHO05D009858 1.0e-48 198.0 284 42.3
CARHR133870 Cardamine hirsuta HOM05D007775 ORTHO05D009858 1.8e-48 197.2 316 39.6
CAN.G256.16 Capsicum annuum HOM05D007775 ORTHO05D009858 8.8e-48 194.9 274 40.5
Cpa.g.sc197.12 Carica papaya HOM05D007775 ORTHO05D009858 8.8e-48 194.9 258 44.2
Manes.15G015200 Manihot esculenta HOM05D007775 ORTHO05D009858 8.8e-48 194.9 258 41.5
Sed0017003 Sechium edule HOM05D007775 ORTHO05D009858 8.8e-48 194.9 268 41.8
Aqoxy2G03074 Aquilegia oxysepala HOM05D007775 ORTHO05D009858 1.2e-47 194.5 243 46.1
BraA04t18439Z Brassica rapa HOM05D007775 ORTHO05D009858 1.5e-47 194.1 302 38.4
DCAR_024553 Daucus carota HOM05D007775 ORTHO05D009858 2.6e-47 193.4 247 42.9
C04p67030 Brassica napus HOM05D007775 ORTHO05D009858 1.3e-46 191.0 301 38.2
BolC4t28205H Brassica oleracea HOM05D007775 ORTHO05D009858 1.7e-46 190.7 303 38.0
arahy.Tifrunner.gnm1.ann1.J8QG6N Arachis hypogaea HOM05D007775 ORTHO05D009858 2.8e-46 189.9 306 36.3
arahy.Tifrunner.gnm1.ann1.KJPE0P Arachis hypogaea HOM05D007775 ORTHO05D009858 3.7e-46 189.5 319 36.7
Gohir.A10G161700 Gossypium hirsutum HOM05D007775 ORTHO05D009858 1.1e-45 188.0 272 41.9
FAN12G2546 Fragaria x ananassa HOM05D007775 ORTHO05D009858 2.4e-45 186.8 270 41.9
Lalb_Chr13g0303771 Lupinus albus HOM05D007775 ORTHO05D009858 2.4e-45 186.8 298 37.2
ATR0706G202 Amborella trichopoda HOM05D007775 ORTHO05D009858 4.1e-45 186.0 213 50.2
Peaxi162Scf00033g01324 Petunia axillaris HOM05D007775 ORTHO05D009858 1.3e-43 181.0 281 37.7
ECA240G4119 Erigeron canadensis HOM05D007775 ORTHO05D009858 2.5e-42 176.8 259 41.3
SMO147G0036 Selaginella moellendorffii HOM05D007775 ORTHO05D009858 4.1e-37 159.5 330 32.4
A04p29770 Brassica napus HOM05D007775 ORTHO05D009858 2.0e-36 157.1 249 38.6
Pp3c21_11960 Physcomitrium patens HOM05D007775 ORTHO05D009858 9.5e-34 148.3 340 30.9
Sc06g0007440 Simmondsia chinensis HOM05D007775 ORTHO05D009858 6.4e-30 135.6 273 36.6
AL4G36400 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 2.7e-28 130.2 219 38.8
BcaC02g12905 Brassica carinata HOM05D007775 ORTHO05D009858 1.7e-27 127.5 257 36.2
Haze_01245 Corylus avellana HOM05D007775 ORTHO05D009858 1.5e-26 124.4 109 56.9
CSS0035717 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 2.8e-25 120.2 84 65.5
CSS0050081 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 4.7e-25 119.4 84 65.5
CSS0036115 Camellia sinensis var. sinensis HOM05D007775 ORTHO05D009858 8.9e-24 115.2 84 64.3
SEGI_15450 Sequoiadendron giganteum HOM05D007775 ORTHO05D009858 2.6e-23 113.6 127 44.9
vmacro08108 Vaccinium macrocarpon HOM05D007775 ORTHO05D009858 5.8e-23 112.5 92 52.2
QL06p007898 Quercus lobata HOM05D007775 ORTHO05D009858 7.0e-21 105.5 113 48.7
FAN12G2785 Fragaria x ananassa HOM05D007775 ORTHO05D009858 2.7e-20 103.6 184 38.0
AL92U10060 Arabidopsis lyrata HOM05D007775 ORTHO05D009858 1.1e-16 91.7 191 35.6
SEGI_08073 Sequoiadendron giganteum HOM05D007775 ORTHO05D009858 5.2e-16 89.4 154 35.7
Prupe.8G004900 Prunus persica HOM05D007775 ORTHO05D009858 1.2e-15 88.2 80 56.2
MSTRG.10078 Avicennia marina HOM05D007775 ORTHO05D009858 2.3e-11 73.9 65 47.7
COL.COLO4_10908 Corchorus olitorius HOM05D007775 ORTHO05D009858 1.5e-07 61.2 77 41.6
Glyma.10G155500 Glycine max HOM05D006625 ORTHO05D008060 7.6e-07 58.9 282 22.7
Hma1.2p1_0617F.1_g190230 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 1.7e-06 57.8 278 23.7
Glyma.20G232800 Glycine max HOM05D006625 ORTHO05D008060 3.8e-06 56.6 283 22.6


User provided reference genes

Program Settings