Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6591 Papaver somniferum HOM05D006340 ORTHO05D007568 5.5e-197 691.4 544 100.0
PSO761G0363 Papaver somniferum HOM05D006340 ORTHO05D007568 1.5e-191 673.3 543 98.3
TAR362G0132 Trochodendron aralioides HOM05D006340 ORTHO05D007568 6.9e-115 418.7 557 74.1
PSO541G0443 Papaver somniferum HOM05D006340 ORTHO05D007568 2.7e-103 380.2 230 83.9
Nn3g21728 Nelumbo nucifera HOM05D006340 ORTHO05D007568 4.3e-101 372.9 554 71.5
MBI18_g32031_MAGBIO Magnolia biondii HOM05D006340 ORTHO05D007568 8.4e-97 358.6 578 52.8
Cfa006707 Carpinus fangiana HOM05D006340 ORTHO05D007568 2.5e-96 357.1 553 70.5
TAR633G1326 Trochodendron aralioides HOM05D006340 ORTHO05D007568 2.5e-96 357.1 543 71.5
Actinidia35518 Actinidia chinensis HOM05D006340 ORTHO05D007568 2.1e-95 354.0 550 68.2
QL03p014074 Quercus lobata HOM05D006340 ORTHO05D007568 2.7e-95 353.6 558 69.0
Aqoxy2G02721 Aquilegia oxysepala HOM05D006340 ORTHO05D007568 6.0e-95 352.4 549 68.3
CSS0010691 Camellia sinensis var. sinensis HOM05D006340 ORTHO05D007568 5.1e-94 349.4 551 67.9
Haze_04056 Corylus avellana HOM05D006340 ORTHO05D007568 7.4e-93 345.5 554 66.6
TWI36G0703 Tripterygium wilfordii HOM05D006340 ORTHO05D007568 1.0e-89 335.1 546 70.1
Potri.013G008200 Populus trichocarpa HOM05D006340 ORTHO05D007568 2.9e-89 333.6 555 67.0
Thecc.05G323700 Theobroma cacao HOM05D006340 ORTHO05D007568 8.4e-89 332.0 553 69.4
Actinidia16863 Actinidia chinensis HOM05D006340 ORTHO05D007568 1.4e-88 331.3 581 54.6
CiPaw.07G030100 Carya illinoinensis HOM05D006340 ORTHO05D007568 7.9e-87 325.5 551 70.2
Duzib177G0712 Durio zibethinus HOM05D006340 ORTHO05D007568 1.3e-86 324.7 555 69.2
Prupe.6G312400 Prunus persica HOM05D006340 ORTHO05D007568 6.7e-86 322.4 553 66.7
Dinv30898 Davidia involucrata HOM05D006340 ORTHO05D007568 3.3e-85 320.1 550 44.0
MBI19_g03242_MAGBIO Magnolia biondii HOM05D006340 ORTHO05D007568 4.3e-85 319.7 549 55.7
GSVIVG01031248001 Vitis vinifera HOM05D006340 ORTHO05D007568 1.3e-84 318.2 550 69.1
Hma1.2p1_0008F-1.1_g005560 Hydrangea macrophylla HOM05D006340 ORTHO05D007568 2.8e-84 317.0 555 70.1
Ciclev10000538m.g Citrus clementina HOM05D006340 ORTHO05D007568 6.3e-84 315.8 559 67.4
MD00G1208300 Malus domestica HOM05D006340 ORTHO05D007568 6.3e-84 315.8 553 67.5
Atru.chr2.357 Acer truncatum HOM05D006340 ORTHO05D007568 2.2e-81 307.4 555 65.2
Potri.005G013000 Populus trichocarpa HOM05D006340 ORTHO05D007568 2.9e-81 307.0 549 65.9
Sabra13G0006900 Salix brachista HOM05D006340 ORTHO05D007568 6.5e-81 305.8 558 54.3
ATR0693G206 Amborella trichopoda HOM05D006340 ORTHO05D007568 8.5e-81 305.4 552 68.3
Gohir.D11G284300 Gossypium hirsutum HOM05D006340 ORTHO05D007568 1.1e-80 305.1 558 67.9
Lju926C5T2 Lonicera japonica HOM05D006340 ORTHO05D007568 1.4e-80 304.7 546 61.2
CsaV3_2G007150 Cucumis sativus L. HOM05D006340 ORTHO05D007568 4.6e-79 299.7 542 65.5
COL.COLO4_05545 Corchorus olitorius HOM05D006340 ORTHO05D007568 7.9e-79 298.9 552 67.4
Gorai.007G307200 Gossypium raimondii HOM05D006340 ORTHO05D007568 7.9e-79 298.9 556 67.8
Sed0011043 Sechium edule HOM05D006340 ORTHO05D007568 1.8e-78 297.7 559 64.0
Os01g0300900 Oryza sativa ssp. japonica HOM05D006340 ORTHO05D007568 2.3e-78 297.4 539 61.8
Cpa.g.sc48.167 Carica papaya HOM05D006340 ORTHO05D007568 3.0e-78 297.0 554 68.4
Sed0017369 Sechium edule HOM05D006340 ORTHO05D007568 3.0e-78 297.0 551 64.1
Zm00001eb340330 Zea mays HOM05D006340 ORTHO05D007568 2.0e-77 294.3 542 63.1
Gohir.A08G205400 Gossypium hirsutum HOM05D006340 ORTHO05D007568 4.3e-77 293.1 547 66.7
ClCG02G014860 Citrullus lanatus HOM05D006340 ORTHO05D007568 1.3e-76 291.6 569 46.4
Glyma.10G146700 Glycine max HOM05D006340 ORTHO05D007568 1.3e-76 291.6 546 65.0
VMungo0720G2454 Vigna mungo HOM05D006340 ORTHO05D007568 6.3e-76 289.3 547 65.3
arahy.Tifrunner.gnm1.ann1.31L8TN Arachis hypogaea HOM05D006340 ORTHO05D007568 1.4e-75 288.1 540 66.3
Glyma.20G096700 Glycine max HOM05D006340 ORTHO05D007568 1.8e-75 287.7 546 64.5
Lsat_1_v5_gn_5_40480 Lactuca sativa HOM05D006340 ORTHO05D007568 3.1e-75 287.0 535 66.4
Phvul.007G201700 Phaseolus vulgaris HOM05D006340 ORTHO05D007568 3.1e-75 287.0 547 64.9
arahy.Tifrunner.gnm1.ann1.35WTTC Arachis hypogaea HOM05D006340 ORTHO05D007568 6.9e-75 285.8 540 66.1
CiPaw.08G154900 Carya illinoinensis HOM05D006340 ORTHO05D007568 5.9e-74 282.7 544 67.8
MD12G1205300 Malus domestica HOM05D006340 ORTHO05D007568 5.9e-74 282.7 555 65.6
Gorai.004G236300 Gossypium raimondii HOM05D006340 ORTHO05D007568 1.7e-73 281.2 549 66.3
Zm00001eb130130 Zea mays HOM05D006340 ORTHO05D007568 2.2e-73 280.8 543 56.5
Duzib128G1170 Durio zibethinus HOM05D006340 ORTHO05D007568 5.0e-73 279.6 548 65.3
Medtr1g084120 Medicago truncatula HOM05D006340 ORTHO05D007568 8.5e-73 278.9 548 60.6
Manes.09G177400 Manihot esculenta HOM05D006340 ORTHO05D007568 1.9e-72 277.7 542 58.5
MELO3C004178.2 Cucumis melo HOM05D006340 ORTHO05D007568 2.5e-72 277.3 543 52.3
ECA246G2180 Erigeron canadensis HOM05D006340 ORTHO05D007568 7.2e-72 275.8 534 65.7
Lj5C328T5 Lonicera japonica HOM05D006340 ORTHO05D007568 4.7e-71 273.1 541 59.3
Ca_10176_v3 Cicer arietinum L. HOM05D006340 ORTHO05D007568 1.0e-70 271.9 548 63.0
Gohir.D08G222500 Gossypium hirsutum HOM05D006340 ORTHO05D007568 1.8e-70 271.2 538 66.7
Lj5g0007706 Lotus japonicus HOM05D006340 ORTHO05D007568 1.8e-70 271.2 561 62.6
Cc02_g35160 Coffea canephora HOM05D006340 ORTHO05D007568 6.7e-70 269.2 558 59.5
Rhsim11G0096500 Rhododendron simsii HOM05D006340 ORTHO05D007568 8.8e-70 268.9 554 60.8
Lalb_Chr02g0147781 Lupinus albus HOM05D006340 ORTHO05D007568 2.0e-69 267.7 544 64.5
DCAR_025287 Daucus carota HOM05D006340 ORTHO05D007568 2.6e-69 267.3 555 63.1
vmacro01568 Vaccinium macrocarpon HOM05D006340 ORTHO05D007568 1.3e-68 265.0 562 52.5
HPP92_005420 Vanilla planifolia HOM05D006340 ORTHO05D007568 2.8e-68 263.8 548 65.7
CANSAT54G2981 Cannabis sativa HOM05D006340 ORTHO05D007568 4.8e-68 263.1 546 64.7
HanXRQChr11g0324231 Helianthus annuus HOM05D006340 ORTHO05D007568 8.2e-68 262.3 540 65.0
AUR62006742 Chenopodium quinoa HOM05D006340 ORTHO05D007568 2.4e-67 260.8 536 63.8
AUR62000387 Chenopodium quinoa HOM05D006340 ORTHO05D007568 5.3e-67 259.6 537 63.9
PGR031G1700 Punica granatum HOM05D006340 ORTHO05D007568 2.2e-65 254.2 552 63.8
TPR.G2586 Trifolium pratense HOM05D006340 ORTHO05D007568 3.2e-64 250.4 562 60.7
Sabra05G0021400 Salix brachista HOM05D006340 ORTHO05D007568 2.1e-63 247.7 580 36.0
RcHm_v2.0_Chr3g0457201 Rosa chinensis HOM05D006340 ORTHO05D007568 2.7e-63 247.3 558 64.0
Hund07311 Selenicereus undatus HOM05D006340 ORTHO05D007568 4.7e-63 246.5 547 63.1
Nitab4.5_0001338g0100 Nicotiana tabacum HOM05D006340 ORTHO05D007568 6.1e-63 246.1 561 56.7
Nitab4.5_0004525g0020 Nicotiana tabacum HOM05D006340 ORTHO05D007568 8.0e-63 245.7 559 56.5
EL10Ac4g09463 Beta vulgaris HOM05D006340 ORTHO05D007568 3.9e-62 243.4 534 65.7
Phvul.001G224800 Phaseolus vulgaris HOM05D006340 ORTHO05D007568 7.4e-61 239.2 539 63.1
Eucgr.H03294 Eucalyptus grandis HOM05D006340 ORTHO05D007568 9.7e-61 238.8 552 63.4
Glyma.03G231000 Glycine max HOM05D006340 ORTHO05D007568 2.2e-60 237.7 537 62.9
Sopen01g044100 Solanum pennellii HOM05D006340 ORTHO05D007568 2.2e-60 237.7 558 61.5
PGSC0003DMG400002763 Solanum tuberosum HOM05D006340 ORTHO05D007568 2.2e-60 237.7 565 60.9
DCAR_029344 Daucus carota HOM05D006340 ORTHO05D007568 3.7e-60 236.9 537 47.5
CAN.G1076.21 Capsicum annuum HOM05D006340 ORTHO05D007568 6.3e-60 236.1 559 57.1
Ah.06g195990 Amaranthus hybridus HOM05D006340 ORTHO05D007568 3.5e-58 230.3 539 60.9
Glyma.19G228200 Glycine max HOM05D006340 ORTHO05D007568 4.5e-58 229.9 535 62.8
FAN02G1774 Fragaria x ananassa HOM05D006340 ORTHO05D007568 2.2e-57 227.6 559 62.4
VMungo1383G0056 Vigna mungo HOM05D006340 ORTHO05D007568 2.9e-57 227.3 537 61.3
FvH4_6g07501 Fragaria vesca HOM05D006340 ORTHO05D007568 3.8e-57 226.9 555 62.7
FAN14G3207 Fragaria x ananassa HOM05D006340 ORTHO05D007568 3.8e-57 226.9 555 62.7
Sabra05G0020800 Salix brachista HOM05D006340 ORTHO05D007568 1.4e-54 218.4 342 66.4
Oeu053742.1 Olea europaea HOM05D006340 ORTHO05D007568 4.0e-54 216.9 542 61.8
Oeu052936.1 Olea europaea HOM05D006340 ORTHO05D007568 5.4e-51 206.5 538 58.7
THA.LOC104816894 Tarenaya hassleriana HOM05D006340 ORTHO05D007568 2.0e-50 204.5 539 49.5
Psat6g152600 Pisum sativum HOM05D006340 ORTHO05D007568 4.5e-50 203.4 406 51.5
Migut.N00937 Erythranthe guttata HOM05D006340 ORTHO05D007568 1.0e-49 202.2 561 54.7
Dinv24462 Davidia involucrata HOM05D006340 ORTHO05D007568 5.5e-48 196.4 254 46.1
Sabra05G0009200 Salix brachista HOM05D006340 ORTHO05D007568 7.0e-43 179.5 203 83.3
arahy.Tifrunner.gnm1.ann1.Y7QP4L Arachis hypogaea HOM05D006340 ORTHO05D007568 3.6e-39 167.2 540 52.6
FAN09G1774 Fragaria x ananassa HOM05D006340 ORTHO05D007568 3.4e-37 160.6 401 56.6
Gohir.A11G274100 Gossypium hirsutum HOM05D006340 ORTHO05D007568 8.3e-36 156.0 374 59.4
SGA_v2.0_scaffold5G02892 Striga asiatica HOM05D006340 ORTHO05D007568 2.4e-35 154.5 560 40.5
Sc16g0009070 Simmondsia chinensis HOM05D006340 ORTHO05D007568 1.7e-33 148.3 391 54.7
arahy.Tifrunner.gnm1.ann1.9H9EE5 Arachis hypogaea HOM05D006340 ORTHO05D007568 7.3e-32 142.9 542 40.4
Solyc01g100600.4 Solanum lycopersicum HOM05D006340 ORTHO05D007568 7.3e-32 142.9 392 50.3
MSTRG.27937 Avicennia marina HOM05D006340 ORTHO05D007568 2.1e-31 141.4 201 71.1
CDE08G0055 Ceratophyllum demersum HOM05D006340 ORTHO05D007568 2.1e-31 141.4 384 54.7
Dinv24463 Davidia involucrata HOM05D006340 ORTHO05D007568 3.4e-29 134.0 177 81.4
CDE02G0367 Ceratophyllum demersum HOM05D006340 ORTHO05D007568 1.7e-28 131.7 538 47.4
Peaxi162Scf01061g00014 Petunia axillaris HOM05D006340 ORTHO05D007568 4.6e-26 123.6 415 30.1
MSTRG.27938 Avicennia marina HOM05D006340 ORTHO05D007568 3.1e-22 110.9 262 36.3
FAN05G4753 Fragaria x ananassa HOM05D006340 ORTHO05D007568 3.1e-22 110.9 387 49.1
unitig_52.g17414 Utricularia gibba HOM05D006340 ORTHO05D007568 4.0e-22 110.5 236 46.2
Sabra05G0020900 Salix brachista HOM05D006340 ORTHO05D007568 7.5e-21 106.3 174 37.9
THA.LOC104824492 Tarenaya hassleriana HOM05D006340 ORTHO05D007568 3.7e-20 104.0 53 81.1
SMO115G0101 Selaginella moellendorffii HOM05D006340 ORTHO05D007568 3.5e-18 97.4 624 32.2
SalBow3G0642 Salvia bowleyana HOM05D006340 ORTHO05D007568 9.5e-16 89.4 195 36.4
Sabra05G0022400 Salix brachista HOM05D006340 ORTHO05D007568 1.9e-11 75.1 72 52.8
ECA169G0006 Erigeron canadensis HOM05D006340 ORTHO05D007568 1.6e-10 72.0 59 54.2
MBI18_g03639_MAGBIO Magnolia biondii HOM05D006340 ORTHO05D007568 3.5e-10 70.9 76 52.6
HanXRQChr11g0339451 Helianthus annuus HOM05D001137 ORTHO05D001967 1.4e-06 58.9 203 24.1
ECA236G0157 Erigeron canadensis HOM05D000001 ORTHO05D001967 3.1e-06 57.8 203 23.6
HanXRQChr14g0433311 Helianthus annuus HOM05D001137 ORTHO05D001967 5.2e-06 57.0 204 24.5


User provided reference genes

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