Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6557 Papaver somniferum HOM05D007620 ORTHO05D009568 6.0e-93 345.9 168 100.0
Hma1.2p1_1512F.1_g287900 Hydrangea macrophylla HOM05D007620 ORTHO05D009568 3.6e-53 213.8 169 63.9
Nn1g02811 Nelumbo nucifera HOM05D007620 ORTHO05D009568 1.4e-52 211.8 171 63.7
QL03p030456 Quercus lobata HOM05D007620 ORTHO05D009568 6.8e-52 209.5 173 61.8
CSS0021218 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 4.4e-51 206.8 173 60.7
CSS0034254 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 4.4e-51 206.8 173 60.7
CSS0013452 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 1.7e-50 204.9 173 59.5
Lsat_1_v5_gn_8_24880 Lactuca sativa HOM05D007620 ORTHO05D009568 3.7e-50 203.8 170 58.2
Haze_04424 Corylus avellana HOM05D007620 ORTHO05D009568 3.1e-49 200.7 173 60.1
Thecc.05G270800 Theobroma cacao HOM05D007620 ORTHO05D009568 7.0e-49 199.5 171 57.9
TAR362G1297 Trochodendron aralioides HOM05D007620 ORTHO05D009568 2.0e-48 198.0 170 58.8
Gohir.D11G257601 Gossypium hirsutum HOM05D007620 ORTHO05D009568 2.7e-48 197.6 177 58.8
Gorai.007G275900 Gossypium raimondii HOM05D007620 ORTHO05D009568 2.7e-48 197.6 177 58.8
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 3.8e-47 193.7 171 59.1
Duzib177G1032 Durio zibethinus HOM05D007620 ORTHO05D009568 5.0e-47 193.4 141 65.2
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 2.3e-44 184.5 168 58.9
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 2.3e-44 184.5 169 57.4
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 4.0e-44 183.7 174 54.0
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 6.8e-44 183.0 174 58.0
Oeu026591.1 Olea europaea HOM05D007620 ORTHO05D009568 1.8e-41 174.9 166 56.0
Ciclev10019446m.g Citrus clementina HOM05D007620 ORTHO05D009568 1.6e-40 171.8 150 58.0
Atru.chr2.986 Acer truncatum HOM05D007620 ORTHO05D009568 7.8e-40 169.5 175 51.4
MELO3C010128.2 Cucumis melo HOM05D007620 ORTHO05D009568 7.8e-40 169.5 164 53.0
Psat0s1841g0080 Pisum sativum HOM05D007620 ORTHO05D009568 7.8e-40 169.5 176 49.4
EL10Ac4g09018 Beta vulgaris HOM05D007620 ORTHO05D009568 2.9e-39 167.5 170 50.0
Cc02_g08810 Coffea canephora HOM05D007620 ORTHO05D009568 2.9e-39 167.5 166 53.6
THA.LOC104801727 Tarenaya hassleriana HOM05D007620 ORTHO05D009568 3.8e-39 167.2 146 56.8
ClCG03G009720 Citrullus lanatus HOM05D007620 ORTHO05D009568 5.0e-39 166.8 115 67.0
CsaV3_1G045110 Cucumis sativus L. HOM05D007620 ORTHO05D009568 8.6e-39 166.0 115 66.1
Migut.F00879 Erythranthe guttata HOM05D007620 ORTHO05D009568 1.9e-38 164.9 181 50.8
MD04G1230300 Malus domestica HOM05D007620 ORTHO05D009568 2.5e-38 164.5 129 62.8
Gohir.A11G247300 Gossypium hirsutum HOM05D007620 ORTHO05D009568 3.3e-38 164.1 96 78.1
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 5.6e-38 163.3 176 47.7
Cfa006355 Carpinus fangiana HOM05D007620 ORTHO05D009568 1.2e-37 162.2 173 49.1
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 1.2e-37 162.2 179 47.5
CSS0031974 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 4.7e-37 160.2 175 52.6
GSVIVG01023503001 Vitis vinifera HOM05D007620 ORTHO05D009568 6.1e-37 159.8 172 50.0
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 8.0e-37 159.5 169 53.3
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 2.3e-36 157.9 139 56.8
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 2.3e-36 157.9 139 56.8
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 3.0e-36 157.5 176 47.7
Sed0010835 Sechium edule HOM05D007620 ORTHO05D009568 6.8e-36 156.4 130 58.5
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 8.9e-36 156.0 139 54.7
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 8.9e-36 156.0 154 51.9
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 2.6e-35 154.5 139 53.2
COL.COLO4_15485 Corchorus olitorius HOM05D007620 ORTHO05D009568 1.3e-34 152.1 98 72.4
Lj2C43T8 Lonicera japonica HOM05D007620 ORTHO05D009568 2.2e-34 151.4 174 47.1
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 2.9e-34 151.0 102 65.7
Sc09g0004220 Simmondsia chinensis HOM05D007620 ORTHO05D009568 8.3e-34 149.4 170 45.3
Glyma.10G166400 Glycine max HOM05D007620 ORTHO05D009568 1.1e-33 149.1 166 48.2
Potri.019G019300 Populus trichocarpa HOM05D007620 ORTHO05D009568 3.2e-33 147.5 139 56.8
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 9.2e-33 146.0 174 46.0
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 9.2e-33 146.0 174 46.0
FvH4_6g01920 Fragaria vesca HOM05D007620 ORTHO05D009568 3.5e-32 144.1 174 45.4
Psat6g139880 Pisum sativum HOM05D007620 ORTHO05D009568 3.5e-32 144.1 219 39.3
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 1.0e-31 142.5 177 45.8
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.0e-31 141.0 174 44.3
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 2.5e-30 137.9 166 44.6
Potri.013G047000 Populus trichocarpa HOM05D007620 ORTHO05D009568 5.6e-30 136.7 172 47.1
Sabra13G0043000 Salix brachista HOM05D007620 ORTHO05D009568 5.6e-30 136.7 174 47.7
SGA_v2.0_scaffold13G06478 Striga asiatica HOM05D007620 ORTHO05D009568 5.6e-30 136.7 145 49.0
PGR004G2089 Punica granatum HOM05D007620 ORTHO05D009568 6.2e-29 133.3 165 47.9
Lalb_Chr21g0311191 Lupinus albus HOM05D007620 ORTHO05D009568 3.1e-28 131.0 175 43.4
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 5.8e-27 126.7 137 50.4
MD12G1247400 Malus domestica HOM05D007620 ORTHO05D009568 4.9e-26 123.6 160 46.9
Lalb_Chr06g0168291 Lupinus albus HOM05D007620 ORTHO05D009568 1.4e-25 122.1 140 46.4
MD12G1247200 Malus domestica HOM05D007620 ORTHO05D009568 3.2e-25 120.9 96 64.6
Ca_09448_v3 Cicer arietinum L. HOM05D007620 ORTHO05D009568 9.2e-25 119.4 177 37.9
HPP92_005407 Vanilla planifolia HOM05D007620 ORTHO05D009568 1.2e-24 119.0 156 39.1
ECA233G5729 Erigeron canadensis HOM05D007620 ORTHO05D009568 4.6e-24 117.1 74 74.3
Peaxi162Scf00528g00227 Petunia axillaris HOM05D007620 ORTHO05D009568 4.6e-24 117.1 165 39.4
PGSC0003DMG400011475 Solanum tuberosum HOM05D007620 ORTHO05D009568 1.7e-23 115.2 166 41.0
CAN.G358.141 Capsicum annuum HOM05D007620 ORTHO05D009568 3.0e-23 114.4 120 52.5
Sp3g03610 Schrenkiella parvula HOM05D007620 ORTHO05D009568 5.1e-23 113.6 158 40.5
Medtr1g080110 Medicago truncatula HOM05D007620 ORTHO05D009568 1.1e-22 112.5 146 42.5
Aa31LG5G15170 Aethionema arabicum HOM05D007620 ORTHO05D009568 1.9e-22 111.7 151 39.7
Lj5g0020911 Lotus japonicus HOM05D007620 ORTHO05D009568 2.5e-22 111.3 73 68.5
Eucgr.H04228 Eucalyptus grandis HOM05D007620 ORTHO05D009568 7.3e-22 109.8 125 48.8
SalBow6G2000 Salvia bowleyana HOM05D007620 ORTHO05D009568 9.5e-22 109.4 74 66.2
AL3G14890 Arabidopsis lyrata HOM05D007620 ORTHO05D009568 3.1e-20 104.4 123 45.5
Lj1g0023548 Lotus japonicus HOM05D007620 ORTHO05D009568 3.1e-20 104.4 138 42.8
AUR62004839 Chenopodium quinoa HOM05D007620 ORTHO05D009568 6.8e-20 103.2 137 43.1
AT3G04760 Arabidopsis thaliana HOM05D007620 ORTHO05D009568 8.9e-20 102.8 80 60.0
Psat0s1841g0040 Pisum sativum HOM05D007620 ORTHO05D009568 8.9e-20 102.8 218 32.6
AUR62040929 Chenopodium quinoa HOM05D007620 ORTHO05D009568 4.4e-19 100.5 137 41.6
Carub.0003s0393 Capsella rubella HOM05D007620 ORTHO05D009568 7.5e-19 99.8 108 46.3
CARHR079010 Cardamine hirsuta HOM05D007620 ORTHO05D009568 3.7e-18 97.4 75 60.0
Ah.06g191910 Amaranthus hybridus HOM05D007620 ORTHO05D009568 6.4e-18 96.7 137 39.4
Glyma.03G251200 Glycine max HOM05D007620 ORTHO05D009568 3.2e-17 94.4 123 42.3
TPR.G22332 Trifolium pratense HOM05D007620 ORTHO05D009568 2.7e-16 91.3 112 41.1
PGR004G1481 Punica granatum HOM05D007620 ORTHO05D009568 4.6e-16 90.5 79 60.8
Prupe.6G350200 Prunus persica HOM05D007620 ORTHO05D009568 8.9e-12 76.3 74 52.7
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 2.6e-11 74.7 91 42.9
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 2.6e-11 74.7 158 35.4
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 2.6e-11 74.7 158 35.4
Nitab4.5_0006737g0010 Nicotiana tabacum HOM05D007620 ORTHO05D009568 1.7e-10 72.0 42 78.6
Sopen04g005200 Solanum pennellii HOM05D007620 ORTHO05D009568 2.9e-10 71.2 42 76.2
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 3.8e-10 70.9 146 34.2
Nitab4.5_0003780g0130 Nicotiana tabacum HOM05D007620 ORTHO05D009568 1.1e-09 69.3 42 76.2
COL.COLO4_15482 Corchorus olitorius HOM05D007620 ORTHO05D009568 2.4e-09 68.2 51 58.8
Thhalv10022408m.g Eutrema salsugineum HOM05D007620 ORTHO05D009568 4.2e-09 67.4 42 71.4
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 2.7e-08 64.7 102 41.2
Gohir.A03G129100 Gossypium hirsutum HOM05D000424 ORTHO05D008586 2.3e-07 61.6 96 30.2
CAN.G843.18 Capsicum annuum HOM05D005764 ORTHO05D006600 3.9e-07 60.8 90 31.1
CDE12G0214 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 3.9e-07 60.8 95 31.6
Gohir.D02G152900 Gossypium hirsutum HOM05D000424 ORTHO05D008586 5.1e-07 60.5 96 29.2
Gorai.005G172000 Gossypium raimondii HOM05D000424 ORTHO05D008586 5.1e-07 60.5 96 29.2
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 1.5e-06 58.9 88 40.9
Zm00001eb151420 Zea mays HOM05D037632 ORTHO05D009568 3.3e-06 57.8 61 41.0
Ah.08g214310 Amaranthus hybridus HOM05D000424 ORTHO05D000355 4.3e-06 57.4 96 30.2
MSTRG.21866 Avicennia marina HOM05D000424 ORTHO05D000355 4.3e-06 57.4 95 29.5
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 5.6e-06 57.0 96 33.3
CSS0033496 Camellia sinensis var. sinensis HOM05D000424 ORTHO05D000355 5.6e-06 57.0 110 30.0


User provided reference genes

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