Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6502 Papaver somniferum HOM05D004267 ORTHO05D005267 2.4e-95 352.1 167 100.0
PSO210G4696 Papaver somniferum HOM05D004267 ORTHO05D005267 2.0e-94 349.0 167 98.8
TAR636G0904 Trochodendron aralioides HOM05D004267 ORTHO05D005267 1.3e-69 266.5 167 70.1
Phvul.001G033101 Phaseolus vulgaris HOM05D004267 ORTHO05D005267 5.1e-69 264.6 167 68.9
Actinidia14699 Actinidia chinensis HOM05D004267 ORTHO05D005267 1.9e-68 262.7 164 70.1
VMungo0647G2384 Vigna mungo HOM05D004267 ORTHO05D005267 9.6e-68 260.4 167 66.5
Glyma.14G092300 Glycine max HOM05D004267 ORTHO05D005267 2.8e-67 258.8 167 66.5
Glyma.17G231200 Glycine max HOM05D004267 ORTHO05D005267 6.2e-67 257.7 167 67.1
Psat6g019000 Pisum sativum HOM05D004267 ORTHO05D005267 8.1e-67 257.3 167 65.9
CSS0026627 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D005267 1.1e-66 256.9 167 67.1
CSS0030161 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D000002 1.1e-66 256.9 167 67.1
Ca_13187_v3 Cicer arietinum L. HOM05D004267 ORTHO05D005267 2.4e-66 255.8 167 64.7
THA.LOC104803799 Tarenaya hassleriana HOM05D004267 ORTHO05D005267 3.1e-66 255.4 167 66.5
Actinidia18200 Actinidia chinensis HOM05D004267 ORTHO05D005267 6.9e-66 254.2 164 67.1
Lalb_Chr14g0367901 Lupinus albus HOM05D004267 ORTHO05D005267 6.9e-66 254.2 167 65.9
GSVIVG01035339001 Vitis vinifera HOM05D004267 ORTHO05D005267 6.9e-66 254.2 167 67.1
Haze_18224 Corylus avellana HOM05D004267 ORTHO05D005267 1.2e-65 253.4 167 64.7
Aqoxy7G03943 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 1.5e-65 253.1 161 65.8
MSTRG.1674 Avicennia marina HOM05D004267 ORTHO05D005267 1.5e-65 253.1 167 67.1
ATR0789G016 Amborella trichopoda HOM05D004267 ORTHO05D005267 2.6e-65 252.3 167 66.5
Medtr1g016900 Medicago truncatula HOM05D004267 ORTHO05D005267 2.6e-65 252.3 167 65.9
QL02p001694 Quercus lobata HOM05D004267 ORTHO05D005267 3.4e-65 251.9 166 65.7
Cfa017926 Carpinus fangiana HOM05D004267 ORTHO05D005267 4.5e-65 251.5 167 64.1
Lj5g0002830 Lotus japonicus HOM05D004267 ORTHO05D005267 9.9e-65 250.4 167 64.1
Atru.chr7.2026 Acer truncatum HOM05D004267 ORTHO05D005267 1.7e-64 249.6 167 64.7
Nn8g38967 Nelumbo nucifera HOM05D004267 ORTHO05D005267 3.8e-64 248.4 167 64.1
Manes.03G046100 Manihot esculenta HOM05D004267 ORTHO05D005267 4.9e-64 248.1 167 64.1
CsaV3_2G025720 Cucumis sativus L. HOM05D004267 ORTHO05D005267 6.4e-64 247.7 167 65.3
Gohir.A06G090500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 6.4e-64 247.7 167 67.7
Gohir.D06G089500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 6.4e-64 247.7 167 67.7
Gorai.010G103400 Gossypium raimondii HOM05D004267 ORTHO05D005267 6.4e-64 247.7 167 67.7
PGR031G1882 Punica granatum HOM05D004267 ORTHO05D005267 6.4e-64 247.7 167 67.7
TPR.G12986 Trifolium pratense HOM05D004267 ORTHO05D005267 6.4e-64 247.7 167 64.1
SGA_v2.0_scaffold88G27217 Striga asiatica HOM05D004267 ORTHO05D005267 1.4e-63 246.5 167 64.1
AT4G32930 Arabidopsis thaliana HOM05D004267 ORTHO05D005267 2.4e-63 245.7 168 65.5
ClCG08G016900 Citrullus lanatus HOM05D004267 ORTHO05D005267 2.4e-63 245.7 167 65.3
Cc08_g10140 Coffea canephora HOM05D004267 ORTHO05D005267 4.2e-63 245.0 167 64.1
AL7G18760 Arabidopsis lyrata HOM05D004267 ORTHO05D005267 5.4e-63 244.6 168 64.9
arahy.Tifrunner.gnm1.ann1.35PLQF Arachis hypogaea HOM05D004267 ORTHO05D005267 7.1e-63 244.2 166 62.7
Rhsim07G0144100 Rhododendron simsii HOM05D004267 ORTHO05D005267 7.1e-63 244.2 167 64.1
Carub.0007s0755 Capsella rubella HOM05D004267 ORTHO05D005267 9.3e-63 243.8 168 64.9
Ciclev10009729m.g Citrus clementina HOM05D004267 ORTHO05D005267 1.6e-62 243.0 166 64.5
Duzib187G0506 Durio zibethinus HOM05D004267 ORTHO05D005267 2.1e-62 242.7 167 64.7
CiPaw.15G042300 Carya illinoinensis HOM05D004267 ORTHO05D005267 3.5e-62 241.9 167 62.3
Hma1.2p1_1213F.1_g267510 Hydrangea macrophylla HOM05D004267 ORTHO05D005267 3.5e-62 241.9 167 62.9
TWI34G0953 Tripterygium wilfordii HOM05D004267 ORTHO05D005267 3.5e-62 241.9 167 64.7
Lj8A557T6 Lonicera japonica HOM05D004267 ORTHO05D005267 4.6e-62 241.5 167 65.3
Gorai.009G047300 Gossypium raimondii HOM05D004267 ORTHO05D005267 7.9e-62 240.7 167 61.1
Sp7g30710 Schrenkiella parvula HOM05D004267 ORTHO05D005267 7.9e-62 240.7 168 63.7
Gohir.A05G044300 Gossypium hirsutum HOM05D004267 ORTHO05D005267 1.0e-61 240.4 167 60.5
TAR624G0139 Trochodendron aralioides HOM05D004267 ORTHO05D005267 1.0e-61 240.4 168 62.5
Sed0007787 Sechium edule HOM05D004267 ORTHO05D005267 1.3e-61 240.0 167 63.5
A03p61690 Brassica napus HOM05D004267 ORTHO05D005267 1.8e-61 239.6 168 64.3
C07p59420 Brassica napus HOM05D004267 ORTHO05D005267 1.8e-61 239.6 168 64.3
Thhalv10025837m.g Eutrema salsugineum HOM05D004267 ORTHO05D005267 1.8e-61 239.6 168 63.7
Migut.A00159 Erythranthe guttata HOM05D004267 ORTHO05D005267 2.3e-61 239.2 167 62.9
BolC1t00557H Brassica oleracea HOM05D004267 ORTHO05D005267 5.1e-61 238.0 168 63.7
BraA01t00509Z Brassica rapa HOM05D004267 ORTHO05D005267 5.1e-61 238.0 168 63.7
vmacro05276 Vaccinium macrocarpon HOM05D004267 ORTHO05D005267 5.1e-61 238.0 174 62.1
A01p05350 Brassica napus HOM05D004267 ORTHO05D005267 6.7e-61 237.7 168 63.7
BcaC09g52093 Brassica carinata HOM05D004267 ORTHO05D005267 8.7e-61 237.3 168 63.7
C01p05770 Brassica napus HOM05D004267 ORTHO05D005267 8.7e-61 237.3 168 63.7
Aa31sc248G70 Aethionema arabicum HOM05D004267 ORTHO05D005267 1.9e-60 236.1 168 64.3
Potri.006G233500 Populus trichocarpa HOM05D004267 ORTHO05D005267 3.3e-60 235.3 167 63.5
Eucgr.C00632 Eucalyptus grandis HOM05D004267 ORTHO05D005267 4.3e-60 235.0 167 61.7
Aa31LG2G6480 Aethionema arabicum HOM05D004267 ORTHO05D005267 5.6e-60 234.6 168 64.9
Thecc.09G050400 Theobroma cacao HOM05D004267 ORTHO05D005267 5.6e-60 234.6 167 61.1
Duzib168G1102 Durio zibethinus HOM05D004267 ORTHO05D005267 7.4e-60 234.2 167 61.7
Oeu036354.1 Olea europaea HOM05D004267 ORTHO05D005267 1.3e-59 233.4 167 62.3
BraA03t15208Z Brassica rapa HOM05D004267 ORTHO05D005267 4.8e-59 231.5 178 60.7
EL10Ac2g03945 Beta vulgaris HOM05D004267 ORTHO05D005267 1.4e-58 229.9 167 61.1
COL.COLO4_21022 Corchorus olitorius HOM05D004267 ORTHO05D005267 1.4e-58 229.9 189 57.7
CANSAT01G0851 Cannabis sativa HOM05D004267 ORTHO05D005267 5.3e-58 228.0 167 61.1
CANSAT01G1320 Cannabis sativa HOM05D004267 ORTHO05D005267 5.3e-58 228.0 167 61.1
SalBow4G2144 Salvia bowleyana HOM05D004267 ORTHO05D005267 6.9e-58 227.6 167 59.3
HanXRQChr17g0539351 Helianthus annuus HOM05D004267 ORTHO05D005267 2.6e-57 225.7 165 60.0
Sc06g0000890 Simmondsia chinensis HOM05D004267 ORTHO05D005267 2.6e-57 225.7 167 60.5
Lsat_1_v5_gn_3_28241 Lactuca sativa HOM05D004267 ORTHO05D005267 4.5e-57 224.9 165 58.8
Peaxi162Scf00247g00612 Petunia axillaris HOM05D004267 ORTHO05D005267 9.9e-57 223.8 167 58.7
MBI04_g12184_MAGBIO Magnolia biondii HOM05D004267 ORTHO05D005267 1.3e-56 223.4 189 56.6
RcHm_v2.0_Chr6g0310421 Rosa chinensis HOM05D004267 ORTHO05D005267 2.2e-56 222.6 166 59.0
Nitab4.5_0021628g0010 Nicotiana tabacum HOM05D004267 ORTHO05D005267 3.8e-56 221.9 167 57.5
FAN20G1958 Fragaria x ananassa HOM05D004267 ORTHO05D005267 8.4e-56 220.7 166 57.8
unitig_578.g16576 Utricularia gibba HOM05D004267 ORTHO05D005267 8.4e-56 220.7 164 59.1
FAN24G1314 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.1e-55 220.3 166 57.8
FvH4_2g32280 Fragaria vesca HOM05D004267 ORTHO05D005267 1.4e-55 219.9 166 57.8
Hund03363 Selenicereus undatus HOM05D004267 ORTHO05D005267 2.4e-55 219.2 189 56.1
Prupe.1G415500 Prunus persica HOM05D004267 ORTHO05D005267 3.2e-55 218.8 164 54.9
SEGI_14756 Sequoiadendron giganteum HOM05D004267 ORTHO05D005267 3.2e-55 218.8 167 58.1
Sc09g0009630 Simmondsia chinensis HOM05D004267 ORTHO05D005267 4.2e-55 218.4 167 58.7
DCAR_000778 Daucus carota HOM05D004267 ORTHO05D005267 7.1e-55 217.6 167 60.5
PGSC0003DMG400025516 Solanum tuberosum HOM05D004267 ORTHO05D005267 2.1e-54 216.1 167 56.9
Solyc11g070050.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 3.5e-54 215.3 167 56.9
Sopen11g028730 Solanum pennellii HOM05D004267 ORTHO05D005267 3.5e-54 215.3 167 56.9
Zm00001eb356880 Zea mays HOM05D004267 ORTHO05D005267 4.6e-54 214.9 165 58.2
ECA246G5265 Erigeron canadensis HOM05D004267 ORTHO05D005267 7.9e-54 214.2 165 57.6
arahy.Tifrunner.gnm1.ann1.97AHJW Arachis hypogaea HOM05D004267 ORTHO05D005267 1.0e-53 213.8 203 49.8
Dinv27959 Davidia involucrata HOM05D004267 ORTHO05D005267 1.0e-53 213.8 167 57.5
HPP92_004580 Vanilla planifolia HOM05D004267 ORTHO05D005267 1.3e-53 213.4 166 57.8
Sabra06G0181900 Salix brachista HOM05D004267 ORTHO05D005267 3.0e-53 212.2 219 47.5
Aqoxy408s001 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 6.7e-53 211.1 126 69.8
MELO3C010766.2 Cucumis melo HOM05D004267 ORTHO05D005267 6.7e-53 211.1 137 67.2
FAN15G3631 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.1e-52 210.3 179 53.6
CAN.G309.57 Capsicum annuum HOM05D004267 ORTHO05D005267 2.5e-52 209.1 168 56.5
Os01g0565600 Oryza sativa ssp. japonica HOM05D004267 ORTHO05D005267 1.6e-51 206.5 166 53.6
Solyc11g070060.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 4.8e-51 204.9 167 56.9
Hund19479 Selenicereus undatus HOM05D004267 ORTHO05D005267 7.1e-47 191.0 176 51.7
BcaNung02146 Brassica carinata HOM05D004267 ORTHO05D005267 1.2e-46 190.3 126 65.1
Pp3c5_10040 Physcomitrium patens HOM05D004267 ORTHO05D005267 1.2e-46 190.3 167 53.9
Mapoly0044s0101 Marchantia polymorpha HOM05D004267 ORTHO05D005267 2.1e-46 189.5 167 50.3
CARHR240940 Cardamine hirsuta HOM05D004267 ORTHO05D005267 2.7e-46 189.1 135 61.5
CDE07G0102 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 5.1e-45 184.9 117 67.5
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 1.9e-44 183.0 131 58.0
FAN27G1738 Fragaria x ananassa HOM05D004267 ORTHO05D005267 2.5e-44 182.6 175 48.6
RcHm_v2.0_Chr6g0310431 Rosa chinensis HOM05D004267 ORTHO05D005267 1.6e-43 179.9 166 50.0
AUR62040201 Chenopodium quinoa HOM05D004267 ORTHO05D005267 9.0e-42 174.1 140 55.0
Nn6g35383 Nelumbo nucifera HOM05D004267 ORTHO05D005267 1.2e-41 173.7 127 61.4
AUR62043052 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.6e-41 172.6 133 57.1
DCAR_004449 Daucus carota HOM05D004267 ORTHO05D005267 3.8e-40 168.7 165 49.7
SMO117G0066 Selaginella moellendorffii HOM05D004267 ORTHO05D005267 8.5e-40 167.5 166 49.4
AUR62009204 Chenopodium quinoa HOM05D004267 ORTHO05D005267 7.2e-39 164.5 137 54.0
Gohir.D05G045900 Gossypium hirsutum HOM05D004267 ORTHO05D005267 7.2e-39 164.5 167 46.1
DCAR_004448 Daucus carota HOM05D004267 ORTHO05D005267 9.3e-39 164.1 166 47.6
FvH4_2g32260 Fragaria vesca HOM05D004267 ORTHO05D005267 2.1e-38 162.9 164 47.6
CDE07G1388 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 7.9e-38 161.0 101 68.3
MD08G1073900 Malus domestica HOM05D004267 ORTHO05D005267 3.9e-37 158.7 177 44.6
CBR_g18691 Chara braunii HOM05D004267 ORTHO05D005267 2.8e-35 152.5 165 45.5
Sopen11g028740 Solanum pennellii HOM05D004267 ORTHO05D005267 6.3e-35 151.4 167 46.1
AagrBONN_evm.TU.Sc2ySwM_344.4469 Anthoceros agrestis HOM05D004267 ORTHO05D005267 1.2e-33 147.1 125 52.8
Lsat_1_v5_gn_5_67680 Lactuca sativa HOM05D004267 ORTHO05D005267 3.4e-33 145.6 131 54.2
FAN15G2319 Fragaria x ananassa HOM05D004267 ORTHO05D005267 5.0e-32 141.7 150 46.7
arahy.Tifrunner.gnm1.ann1.BB3MLG Arachis hypogaea HOM05D004267 ORTHO05D005267 6.5e-32 141.4 97 59.8
arahy.Tifrunner.gnm1.ann1.JED36R Arachis hypogaea HOM05D004267 ORTHO05D005267 6.5e-32 141.4 97 59.8
FAN24G0417 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.9e-31 139.8 147 44.9
Cpa.g.sc78.12 Carica papaya HOM05D004267 ORTHO05D005267 7.9e-30 134.4 98 61.2
Zm00001eb159830 Zea mays HOM05D004267 ORTHO05D005267 3.3e-28 129.0 97 59.8
Aqoxy7G03867 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 3.1e-26 122.5 126 42.1
GSVIVG01016840001 Vitis vinifera HOM05D004267 ORTHO05D005267 3.8e-24 115.5 164 38.4
Rhsim01G0086000 Rhododendron simsii HOM05D004267 ORTHO05D005267 6.5e-24 114.8 80 62.5
GSVIVG01016838001 Vitis vinifera HOM05D004267 ORTHO05D005267 6.5e-24 114.8 164 38.4
BcaC07g42315 Brassica carinata HOM05D004267 ORTHO05D005267 3.6e-22 109.0 183 36.6
Peaxi162Scf00545g00002 Petunia axillaris HOM05D004267 ORTHO05D005267 3.6e-22 109.0 105 52.4
Aqoxy7G03891 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 4.7e-22 108.6 92 51.1
Oeu057699.1 Olea europaea HOM05D004267 ORTHO05D005267 3.7e-19 99.0 113 43.4
Cre09.g395800 Chlamydomonas reinhardtii HOM05D004267 ORTHO05D005267 1.8e-18 96.7 167 32.9
Peaxi162Scf00545g00001 Petunia axillaris HOM05D004267 ORTHO05D005267 4.1e-18 95.5 85 55.3
AUR62002213 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.2e-16 89.7 68 60.3
AUR62018016 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.2e-16 89.7 68 60.3
AUR62022800 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.2e-16 89.7 70 60.0
AUR62010512 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.9e-15 86.7 57 66.7
AUR62034857 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.7e-14 82.8 68 57.4
AUR62007889 Chenopodium quinoa HOM05D004267 ORTHO05D005267 3.6e-14 82.4 57 64.9
AUR62044607 Chenopodium quinoa HOM05D004267 ORTHO05D005267 6.1e-14 81.6 68 55.9
MCO11G136 Micromonas commoda HOM05D004267 ORTHO05D005267 5.7e-12 75.1 169 30.8
Nitab4.5_0001927g0070 Nicotiana tabacum HOM05D004267 ORTHO05D005267 5.3e-10 68.6 61 45.9
Nitab4.5_0001927g0060 Nicotiana tabacum HOM05D004267 ORTHO05D005267 5.9e-09 65.1 112 29.5
AUR62036408 Chenopodium quinoa HOM05D001707 ORTHO05D001694 1.9e-07 60.1 56 51.8
VMungo1196G0001 Vigna mungo HOM05D005620 ORTHO05D005267 9.4e-07 57.8 40 60.0
CAN.G1143.36 Capsicum annuum HOM05D001836 ORTHO05D001519 1.6e-06 57.0 55 40.0
AUR62038391 Chenopodium quinoa HOM05D004267 ORTHO05D005267 4.7e-06 55.5 40 60.0
BcaB05g24144 Brassica carinata HOM05D000010 ORTHO05D000063 8.0e-06 54.7 47 57.4


User provided reference genes

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