Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6497 Papaver somniferum HOM05D004042 ORTHO05D004552 8.5e-288 993.0 523 100.0
PSO210G1704 Papaver somniferum HOM05D004042 ORTHO05D004552 1.1e-274 949.5 523 96.2
PSO063G3240 Papaver somniferum HOM05D004042 ORTHO05D004552 1.3e-200 703.4 424 80.9
Aqoxy7G01162 Aquilegia oxysepala HOM05D004042 ORTHO05D004552 1.1e-199 700.3 457 76.4
PSO832G2139 Papaver somniferum HOM05D004042 ORTHO05D004552 3.7e-198 695.3 465 74.2
TAR624G0704 Trochodendron aralioides HOM05D004042 ORTHO05D004552 4.0e-197 691.8 463 74.7
Ciclev10008048m.g Citrus clementina HOM05D004042 ORTHO05D004552 3.4e-196 688.7 462 73.8
Haze_25938 Corylus avellana HOM05D004042 ORTHO05D004552 4.5e-196 688.3 453 76.6
Prupe.7G206100 Prunus persica HOM05D004042 ORTHO05D004552 4.5e-196 688.3 443 76.1
Nn6g35535 Nelumbo nucifera HOM05D004042 ORTHO05D004552 4.9e-195 684.9 451 76.3
Cfa003057 Carpinus fangiana HOM05D004042 ORTHO05D004552 6.4e-195 684.5 447 76.7
MELO3C004632.2 Cucumis melo HOM05D004042 ORTHO05D004552 2.4e-194 682.6 423 78.7
CsaV3_2G001380 Cucumis sativus L. HOM05D004042 ORTHO05D004552 5.5e-194 681.4 423 78.5
CiPaw.03G212500 Carya illinoinensis HOM05D004042 ORTHO05D004552 7.1e-194 681.0 425 79.5
Sed0015499 Sechium edule HOM05D004042 ORTHO05D004552 9.3e-194 680.6 461 72.7
Sc08g0008580 Simmondsia chinensis HOM05D004042 ORTHO05D004552 1.2e-193 680.2 428 76.6
Atru.chr7.1627 Acer truncatum HOM05D004042 ORTHO05D004552 4.6e-193 678.3 475 73.3
Glyma.13G106100 Glycine max HOM05D004042 ORTHO05D004552 6.0e-193 677.9 437 75.3
GSVIVG01015174001 Vitis vinifera HOM05D004042 ORTHO05D004552 7.9e-193 677.6 450 74.0
MD02G1082600 Malus domestica HOM05D004042 ORTHO05D004552 1.0e-192 677.2 435 76.3
Oeu051295.1 Olea europaea HOM05D004042 ORTHO05D004552 1.8e-192 676.4 452 75.7
Oeu054835.1 Olea europaea HOM05D004042 ORTHO05D004552 1.8e-192 676.4 455 73.6
Phvul.009G230700 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 1.8e-192 676.4 468 71.8
Glyma.17G053300 Glycine max HOM05D004042 ORTHO05D004552 5.1e-192 674.9 518 66.4
Glyma.09G065300 Glycine max HOM05D004042 ORTHO05D004552 1.9e-191 672.9 426 77.5
Medtr4g125980 Medicago truncatula HOM05D004042 ORTHO05D004552 1.9e-191 672.9 440 74.5
Psat7g044040 Pisum sativum HOM05D004042 ORTHO05D004552 3.3e-191 672.2 427 77.0
Lalb_Chr08g0232371 Lupinus albus HOM05D004042 ORTHO05D004552 4.3e-191 671.8 439 74.7
Thecc.09G085400 Theobroma cacao HOM05D004042 ORTHO05D004552 4.3e-191 671.8 533 66.8
ATR0789G051 Amborella trichopoda HOM05D004042 ORTHO05D004552 5.6e-191 671.4 465 70.8
Migut.J00573 Erythranthe guttata HOM05D004042 ORTHO05D004552 9.6e-191 670.6 462 73.2
Phvul.003G134900 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 9.6e-191 670.6 427 75.9
Potri.018G066100 Populus trichocarpa HOM05D004042 ORTHO05D004552 1.3e-190 670.2 438 75.1
TPR.G29533 Trifolium pratense HOM05D004042 ORTHO05D004552 1.6e-190 669.8 465 71.4
Lj4g0002498 Lotus japonicus HOM05D004042 ORTHO05D004552 2.1e-190 669.5 441 75.5
HanXRQChr12g0354671 Helianthus annuus HOM05D004042 ORTHO05D004552 6.2e-190 667.9 458 72.7
MSTRG.19492 Avicennia marina HOM05D004042 ORTHO05D004552 8.2e-190 667.5 464 71.8
TPR.G9438 Trifolium pratense HOM05D004042 ORTHO05D004552 1.1e-189 667.2 521 66.4
CAN.G57.12 Capsicum annuum HOM05D004042 ORTHO05D004552 1.8e-189 666.4 433 76.0
MD15G1210700 Malus domestica HOM05D004042 ORTHO05D004552 1.8e-189 666.4 444 73.9
Solyc07g040740.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 1.8e-189 666.4 460 71.5
CiPaw.04G147900 Carya illinoinensis HOM05D004042 ORTHO05D004552 2.4e-189 666.0 462 72.7
Psat1g132200 Pisum sativum HOM05D004042 ORTHO05D004552 3.1e-189 665.6 464 72.6
QL02p062121 Quercus lobata HOM05D004042 ORTHO05D004552 6.9e-189 664.5 430 76.7
Sopen07g019480 Solanum pennellii HOM05D004042 ORTHO05D004552 9.0e-189 664.1 460 71.3
Medtr2g039940 Medicago truncatula HOM05D004042 ORTHO05D004552 1.5e-188 663.3 472 71.6
PGR142G2341 Punica granatum HOM05D004042 ORTHO05D004552 1.5e-188 663.3 431 75.4
Cc06_g11620 Coffea canephora HOM05D004042 ORTHO05D004552 4.5e-188 661.8 421 77.7
DCAR_028272 Daucus carota HOM05D004042 ORTHO05D004552 7.6e-188 661.0 450 72.4
RcHm_v2.0_Chr2g0093781 Rosa chinensis HOM05D004042 ORTHO05D004552 1.0e-187 660.6 462 71.2
VMungo1215G0315 Vigna mungo HOM05D004042 ORTHO05D004552 2.9e-187 659.1 511 65.8
HanXRQChr03g0060291 Helianthus annuus HOM05D004042 ORTHO05D004552 4.9e-187 658.3 455 71.4
FvH4_1g07910 Fragaria vesca HOM05D004042 ORTHO05D004552 8.4e-187 657.5 450 72.9
HanXRQChr10g0319461 Helianthus annuus HOM05D004042 ORTHO05D004552 8.4e-187 657.5 468 70.1
Manes.16G100000 Manihot esculenta HOM05D004042 ORTHO05D004552 2.5e-186 656.0 462 70.8
Gohir.D07G012400 Gossypium hirsutum HOM05D004042 ORTHO05D004552 4.2e-186 655.2 471 71.1
ECA234G2403 Erigeron canadensis HOM05D004042 ORTHO05D004552 5.5e-186 654.8 424 75.2
Gorai.001G013100 Gossypium raimondii HOM05D004042 ORTHO05D004552 5.5e-186 654.8 471 70.9
PGSC0003DMG400000274 Solanum tuberosum HOM05D004042 ORTHO05D004552 9.3e-186 654.1 457 71.6
Sopen12g003900 Solanum pennellii HOM05D004042 ORTHO05D004552 2.1e-185 652.9 457 70.9
THA.LOC104814629 Tarenaya hassleriana HOM05D004042 ORTHO05D004552 2.7e-185 652.5 438 73.5
CDE05G1317 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 3.5e-185 652.1 439 71.8
Solyc12g008970.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 3.5e-185 652.1 457 70.7
ClCG11G001680 Citrullus lanatus HOM05D004042 ORTHO05D004552 4.6e-185 651.7 460 71.1
Gohir.A07G012600 Gossypium hirsutum HOM05D004042 ORTHO05D004552 1.3e-184 650.2 471 70.5
Lj6g0011849 Lotus japonicus HOM05D004042 ORTHO05D004552 6.7e-184 647.9 468 69.4
A07p01320 Brassica napus HOM05D004042 ORTHO05D004552 8.7e-184 647.5 463 70.4
BraA07t27923Z Brassica rapa HOM05D004042 ORTHO05D004552 8.7e-184 647.5 463 70.4
Actinidia25240 Actinidia chinensis HOM05D004042 ORTHO05D004552 1.5e-183 646.7 455 73.0
AL3G48800 Arabidopsis lyrata HOM05D004042 ORTHO05D004552 1.5e-183 646.7 427 74.5
Carub.0003s3373 Capsella rubella HOM05D004042 ORTHO05D004552 1.9e-183 646.4 427 74.2
Thhalv10022645m.g Eutrema salsugineum HOM05D004042 ORTHO05D004552 1.9e-183 646.4 428 74.5
C07p02710 Brassica napus HOM05D004042 ORTHO05D004552 3.3e-183 645.6 460 70.0
BolC7t40671H Brassica oleracea HOM05D004042 ORTHO05D004552 3.3e-183 645.6 460 70.0
AT2G19450 Arabidopsis thaliana HOM05D004042 ORTHO05D004552 7.4e-183 644.4 422 75.1
BcaB03g16730 Brassica carinata HOM05D004042 ORTHO05D004552 9.7e-183 644.0 428 74.3
BcaC06g36576 Brassica carinata HOM05D004042 ORTHO05D004552 1.3e-182 643.7 425 74.1
A09p12360 Brassica napus HOM05D004042 ORTHO05D004552 1.6e-182 643.3 442 73.5
C09p14580 Brassica napus HOM05D004042 ORTHO05D004552 1.6e-182 643.3 442 73.5
BraA09t36880Z Brassica rapa HOM05D004042 ORTHO05D004552 1.6e-182 643.3 442 73.5
Sp3g32820 Schrenkiella parvula HOM05D004042 ORTHO05D004552 2.2e-182 642.9 428 74.1
BcaC04g22852 Brassica carinata HOM05D004042 ORTHO05D004552 3.7e-182 642.1 460 71.1
BolC9t54364H Brassica oleracea HOM05D004042 ORTHO05D004552 3.7e-182 642.1 460 71.1
BcaB07g31608 Brassica carinata HOM05D004042 ORTHO05D004552 4.8e-182 641.7 442 72.6
Nitab4.5_0009216g0010 Nicotiana tabacum HOM05D004042 ORTHO05D004552 6.3e-182 641.3 505 66.3
HPP92_005224 Vanilla planifolia HOM05D004042 ORTHO05D004552 3.1e-181 639.0 433 72.3
FAN26G3195 Fragaria x ananassa HOM05D004042 ORTHO05D004552 4.1e-181 638.6 432 74.1
Dinv42339 Davidia involucrata HOM05D004042 ORTHO05D004552 9.0e-181 637.5 397 78.3
FAN26G0253 Fragaria x ananassa HOM05D004042 ORTHO05D004552 9.0e-181 637.5 432 74.1
TWI32G1194 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 9.0e-181 637.5 446 72.0
Duzib168G0739 Durio zibethinus HOM05D004042 ORTHO05D004552 2.6e-180 636.0 532 63.3
Lalb_Chr13g0299591 Lupinus albus HOM05D004042 ORTHO05D004552 2.6e-180 636.0 463 67.8
CARHR109890 Cardamine hirsuta HOM05D004042 ORTHO05D004552 3.4e-180 635.6 436 72.9
vmacro17139 Vaccinium macrocarpon HOM05D004042 ORTHO05D004552 4.5e-180 635.2 570 61.2
Os06g0563900 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 7.6e-180 634.4 420 73.3
FAN28G1686 Fragaria x ananassa HOM05D004042 ORTHO05D004552 1.0e-179 634.0 453 70.9
CANSAT56G0725 Cannabis sativa HOM05D004042 ORTHO05D004552 1.6e-177 626.7 461 69.2
FAN19G1831 Fragaria x ananassa HOM05D004042 ORTHO05D004552 2.3e-176 622.9 450 71.1
Zm00001eb277490 Zea mays HOM05D004042 ORTHO05D004552 8.7e-176 620.9 419 71.1
FAN23G0463 Fragaria x ananassa HOM05D004042 ORTHO05D004552 1.5e-175 620.2 462 70.1
TWI63G1034 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 1.4e-173 613.6 425 73.2
Potri.006G147600 Populus trichocarpa HOM05D004042 ORTHO05D004552 1.3e-171 607.1 428 70.3
Mapoly0012s0121 Marchantia polymorpha HOM05D004042 ORTHO05D004552 2.2e-171 606.3 441 65.1
arahy.Tifrunner.gnm1.ann1.MYU01D Arachis hypogaea HOM05D004042 ORTHO05D004552 8.5e-171 604.4 493 62.9
Aa31LG8G16450 Aethionema arabicum HOM05D004042 ORTHO05D004552 4.2e-170 602.1 422 72.3
Os05g0196800 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 7.2e-170 601.3 421 67.9
Peaxi162Scf00498g00448 Petunia axillaris HOM05D004042 ORTHO05D004552 6.7e-168 594.7 438 69.9
AagrBONN_evm.TU.Sc2ySwM_117.1233 Anthoceros agrestis HOM05D004042 ORTHO05D004552 3.4e-164 582.4 460 62.4
Lj7C679G4 Lonicera japonica HOM05D004042 ORTHO05D004552 4.5e-164 582.0 427 70.3
AagrBONN_evm.TU.Sc2ySwM_344.3248 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.7e-163 580.1 428 64.3
Lsat_1_v5_gn_5_143061 Lactuca sativa HOM05D004042 ORTHO05D004552 1.7e-163 580.1 462 66.2
arahy.Tifrunner.gnm1.ann1.MZM9C8 Arachis hypogaea HOM05D004042 ORTHO05D004552 2.1e-161 573.2 505 59.8
Pp3c15_23830 Physcomitrium patens HOM05D004042 ORTHO05D004552 6.1e-161 571.6 432 63.2
SGA_v2.0_scaffold91G28060 Striga asiatica HOM05D004042 ORTHO05D004552 6.1e-161 571.6 460 66.7
CAN.G1583.6 Capsicum annuum HOM05D004042 ORTHO05D004552 1.5e-159 567.0 375 72.3
unitig_8.g4318 Utricularia gibba HOM05D004042 ORTHO05D004552 1.5e-159 567.0 423 67.4
Dinv36786 Davidia involucrata HOM05D004042 ORTHO05D004552 4.4e-159 565.5 388 73.7
Nitab4.5_0001519g0080 Nicotiana tabacum HOM05D004042 ORTHO05D004552 4.1e-157 558.9 469 64.6
TAR636G2477 Trochodendron aralioides HOM05D004042 ORTHO05D004552 5.3e-157 558.5 484 63.6
Rhsim05G0016600 Rhododendron simsii HOM05D004042 ORTHO05D004552 1.1e-154 550.8 547 58.0
SMO356G0470 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 1.5e-154 550.4 418 64.4
HPP92_003981 Vanilla planifolia HOM05D004042 ORTHO05D004552 6.7e-152 541.6 416 64.9
EL10Ac8g19178 Beta vulgaris HOM05D004042 ORTHO05D004552 8.8e-152 541.2 519 56.8
Eucgr.C03419 Eucalyptus grandis HOM05D004042 ORTHO05D004552 1.5e-151 540.4 358 74.3
Nitab4.5_0002824g0090 Nicotiana tabacum HOM05D004042 ORTHO05D004552 2.8e-150 536.2 420 66.0
Oeu032802.1 Olea europaea HOM05D004042 ORTHO05D004552 3.7e-150 535.8 480 62.3
arahy.Tifrunner.gnm1.ann1.W5L64F Arachis hypogaea HOM05D004042 ORTHO05D004552 1.1e-146 524.2 440 62.0
SalBow6G0873 Salvia bowleyana HOM05D004042 ORTHO05D004552 3.0e-144 516.2 474 61.4
DCAR_011961 Daucus carota HOM05D004042 ORTHO05D004552 2.6e-143 513.1 369 68.8
Ca_13125_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 3.7e-142 509.2 405 65.9
Pp3c9_24440 Physcomitrium patens HOM05D004042 ORTHO05D004552 5.4e-141 505.4 401 62.6
arahy.Tifrunner.gnm1.ann1.5W0QMQ Arachis hypogaea HOM05D004042 ORTHO05D004552 7.0e-141 505.0 447 59.5
Zm00001eb284200 Zea mays HOM05D004042 ORTHO05D004552 1.9e-138 496.9 357 68.6
Lalb_Chr11g0074521 Lupinus albus HOM05D004042 ORTHO05D004552 1.2e-137 494.2 363 70.0
Manes.03G036000 Manihot esculenta HOM05D004042 ORTHO05D004552 4.0e-136 489.2 404 63.9
Sabra06G0116600 Salix brachista HOM05D004042 ORTHO05D004552 1.2e-135 487.6 351 69.5
Hund25994 Selenicereus undatus HOM05D004042 ORTHO05D004552 1.2e-135 487.6 320 74.7
Nitab4.5_0002642g0100 Nicotiana tabacum HOM05D004042 ORTHO05D004552 2.6e-135 486.5 422 60.9
Sabra18G0058600 Salix brachista HOM05D004042 ORTHO05D004552 2.6e-135 486.5 340 72.1
Peaxi162Scf00494g00077 Petunia axillaris HOM05D004042 ORTHO05D004552 7.5e-135 485.0 458 60.3
Ca_21290_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 5.4e-133 478.8 347 71.8
AUR62029034 Chenopodium quinoa HOM05D004042 ORTHO05D004552 2.9e-131 473.0 342 71.6
CSS0045629 Camellia sinensis var. sinensis HOM05D004042 ORTHO05D004552 8.6e-131 471.5 491 55.4
Hund06663 Selenicereus undatus HOM05D004042 ORTHO05D004552 4.4e-127 459.1 400 60.5
AagrBONN_evm.TU.Sc2ySwM_344.1721 Anthoceros agrestis HOM05D004042 ORTHO05D004552 1.2e-124 451.1 358 62.3
VMungo1309G0638 Vigna mungo HOM05D004042 ORTHO05D004552 3.7e-118 429.5 331 69.2
CDE05G1467 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 2.1e-116 423.7 315 69.2
Sc18g0002260 Simmondsia chinensis HOM05D004042 ORTHO05D004552 1.4e-109 401.0 281 72.6
PRCOL_00002371 Prasinoderma coloniale HOM05D004042 ORTHO05D004552 2.4e-96 357.1 434 46.1
Hma1.2p1_0672F.1_g201026 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 2.4e-93 347.1 209 82.3
AUR62033935 Chenopodium quinoa HOM05D004042 ORTHO05D004552 1.3e-73 281.6 305 54.4
PGSC0003DMG400032788 Solanum tuberosum HOM05D004042 ORTHO05D004552 1.1e-72 278.5 237 62.4
Cpa.g.sc737.2 Carica papaya HOM05D004042 ORTHO05D004552 4.6e-68 263.1 144 81.2
COL.COLO4_18176 Corchorus olitorius HOM05D004042 ORTHO05D004552 2.8e-65 253.8 223 63.7
SMO361G0462 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 2.5e-61 240.7 193 59.1
Haze_27058 Corylus avellana HOM05D004042 ORTHO05D004552 3.9e-59 233.4 409 35.5
Hma1.2p1_0672F.1_g201023 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 5.1e-59 233.0 154 79.2
Lj4C291G3 Lonicera japonica HOM05D004042 ORTHO05D004552 6.7e-59 232.6 237 57.8
Cre01.g045903 Chlamydomonas reinhardtii HOM05D004042 ORTHO05D004552 2.0e-58 231.1 166 61.4
FAN28G2747 Fragaria x ananassa HOM05D004042 ORTHO05D004552 3.4e-55 220.3 457 34.8
Cfa021676 Carpinus fangiana HOM05D004042 ORTHO05D004552 1.4e-51 208.4 472 32.0
Cpa.g.sc737.3 Carica papaya HOM05D004042 ORTHO05D004552 4.8e-49 199.9 138 72.5
PGSC0003DMG400032789 Solanum tuberosum HOM05D004042 ORTHO05D004552 4.1e-40 170.2 101 77.2
Peaxi162Scf00126g01028 Petunia axillaris HOM05D004042 ORTHO05D004552 1.7e-17 95.1 49 87.8
Cfa024924 Carpinus fangiana HOM05D004042 ORTHO05D004552 3.7e-17 94.0 294 27.6
Cfa025900 Carpinus fangiana HOM05D004042 ORTHO05D123407 4.9e-17 93.6 187 29.9
PSO765G0232 Papaver somniferum HOM05D004042 ORTHO05D004552 8.3e-17 92.8 122 50.8
Lalb_Chr11g0074531 Lupinus albus HOM05D004042 ORTHO05D004552 5.9e-15 86.7 48 77.1
Glyma.15G171700 Glycine max HOM05D004042 ORTHO05D004552 8.6e-14 82.8 51 70.6
Sabra18G0058500 Salix brachista HOM05D004042 ORTHO05D004552 9.8e-10 69.3 106 39.6
AUR62029035 Chenopodium quinoa HOM05D004042 ORTHO05D004552 5.4e-08 63.5 39 69.2
SEGI_28032 Sequoiadendron giganteum HOM05D004042 ORTHO05D004552 4.6e-07 60.5 64 46.9
PSO339G6631 Papaver somniferum HOM05D002947 ORTHO05D037275 6.0e-07 60.1 42 64.3
PSO266G0038 Papaver somniferum HOM05D002947 ORTHO05D037275 1.3e-06 58.9 42 64.3


User provided reference genes

Program Settings