Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6435 Papaver somniferum HOM05D005314 ORTHO05D006522 4.0e-185 651.4 346 100.0
PSO210G6321 Papaver somniferum HOM05D005314 ORTHO05D006522 2.6e-184 648.7 346 99.7
TAR369G0158 Trochodendron aralioides HOM05D005314 ORTHO05D006522 5.8e-160 567.8 346 87.0
TAR636G1106 Trochodendron aralioides HOM05D005314 ORTHO05D006522 5.8e-160 567.8 346 87.0
Dinv22878 Davidia involucrata HOM05D005314 ORTHO05D006522 4.2e-150 535.0 346 81.2
Prupe.1G409300 Prunus persica HOM05D005314 ORTHO05D006522 7.1e-150 534.3 346 79.5
Aqoxy7G04033 Aquilegia oxysepala HOM05D000411 ORTHO05D006522 9.3e-150 533.9 342 80.4
Nn8g38796 Nelumbo nucifera HOM05D005314 ORTHO05D006522 9.3e-150 533.9 351 80.9
RcHm_v2.0_Chr6g0311221 Rosa chinensis HOM05D005314 ORTHO05D006522 2.7e-149 532.3 346 80.3
COL.COLO4_21084 Corchorus olitorius HOM05D005314 ORTHO05D006522 2.3e-148 529.3 346 80.6
Thecc.09G057100 Theobroma cacao HOM05D005314 ORTHO05D006522 3.0e-148 528.9 346 79.5
Migut.A00114 Erythranthe guttata HOM05D005314 ORTHO05D006522 1.5e-147 526.6 338 79.3
CANSAT25G2280 Cannabis sativa HOM05D005314 ORTHO05D006522 4.3e-147 525.0 347 79.0
Cfa017974 Carpinus fangiana HOM05D005314 ORTHO05D006522 4.3e-147 525.0 346 78.3
Haze_18156 Corylus avellana HOM05D005314 ORTHO05D006522 4.3e-147 525.0 346 78.6
Manes.03G050000 Manihot esculenta HOM05D005314 ORTHO05D006522 7.4e-147 524.2 346 78.3
FvH4_2g31600 Fragaria vesca HOM05D005314 ORTHO05D006522 9.6e-147 523.9 346 78.9
Actinidia30326 Actinidia chinensis HOM05D005314 ORTHO05D006522 1.6e-146 523.1 347 78.7
QL02p000736 Quercus lobata HOM05D005314 ORTHO05D006522 3.7e-146 521.9 345 78.3
CSS0005464 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 4.8e-146 521.5 347 78.1
CiPaw.15G037000 Carya illinoinensis HOM05D005314 ORTHO05D006522 1.4e-145 520.0 346 77.5
Cc08_g10890 Coffea canephora HOM05D005314 ORTHO05D006522 1.4e-145 520.0 346 76.9
BolC9t59318H Brassica oleracea HOM05D005314 ORTHO05D006522 1.8e-145 519.6 344 76.7
TWI32G0330 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 1.8e-145 519.6 346 78.3
TWI34G0632 Tripterygium wilfordii HOM05D005314 ORTHO05D006522 2.4e-145 519.2 346 77.7
MD15G1056700 Malus domestica HOM05D005314 ORTHO05D006522 3.1e-145 518.8 346 77.7
MSTRG.25961 Avicennia marina HOM05D005314 ORTHO05D006522 1.5e-144 516.5 346 76.6
C09p64870 Brassica napus HOM05D005314 ORTHO05D006522 1.5e-144 516.5 344 76.5
BcaNung02637 Brassica carinata HOM05D005314 ORTHO05D006522 3.4e-144 515.4 344 76.5
A10p25800 Brassica napus HOM05D005314 ORTHO05D006522 3.4e-144 515.4 344 76.2
Gorai.013G220600 Gossypium raimondii HOM05D005314 ORTHO05D006522 3.4e-144 515.4 346 77.2
Hma1.2p1_0544F.1_g175630 Hydrangea macrophylla HOM05D005314 ORTHO05D006522 3.4e-144 515.4 343 78.1
Gohir.D13G194600 Gossypium hirsutum HOM05D005314 ORTHO05D006522 4.5e-144 515.0 346 77.2
PGR044G2019 Punica granatum HOM05D005314 ORTHO05D006522 4.5e-144 515.0 347 78.7
Gohir.A07G021950 Gossypium hirsutum HOM05D005314 ORTHO05D006522 2.2e-143 512.7 346 76.9
MD08G1064900 Malus domestica HOM05D005314 ORTHO05D006522 2.9e-143 512.3 346 76.9
Gorai.001G022500 Gossypium raimondii HOM05D005314 ORTHO05D006522 8.4e-143 510.8 346 76.6
SalBow4G3021 Salvia bowleyana HOM05D005314 ORTHO05D006522 1.1e-142 510.4 346 76.6
Gohir.A13G187700 Gossypium hirsutum HOM05D005314 ORTHO05D006522 1.4e-142 510.0 346 76.6
GSVIVG01035376001 Vitis vinifera HOM05D005314 ORTHO05D006522 1.4e-142 510.0 349 77.7
A02p01290 Brassica napus HOM05D005314 ORTHO05D006522 3.2e-142 508.8 344 75.9
BraA02t05108Z Brassica rapa HOM05D005314 ORTHO05D006522 3.2e-142 508.8 344 75.9
CsaV3_4G035770 Cucumis sativus L. HOM05D005314 ORTHO05D006522 3.2e-142 508.8 338 77.5
Sp6g31630 Schrenkiella parvula HOM05D005314 ORTHO05D006522 3.2e-142 508.8 344 75.9
Thhalv10014010m.g Eutrema salsugineum HOM05D005314 ORTHO05D006522 5.5e-142 508.1 344 75.9
BcaC03g13403 Brassica carinata HOM05D005314 ORTHO05D006522 9.3e-142 507.3 344 75.6
C02p05500 Brassica napus HOM05D005314 ORTHO05D006522 9.3e-142 507.3 344 75.6
BolC2t06496H Brassica oleracea HOM05D005314 ORTHO05D006522 9.3e-142 507.3 344 75.6
CiPaw.16G027100 Carya illinoinensis HOM05D005314 ORTHO05D006522 1.2e-141 506.9 346 76.6
BraA10t44644Z Brassica rapa HOM05D005314 ORTHO05D006522 1.6e-141 506.5 356 73.6
ClCG05G017990 Citrullus lanatus HOM05D005314 ORTHO05D006522 1.6e-141 506.5 346 76.3
Eucgr.C03058 Eucalyptus grandis HOM05D005314 ORTHO05D006522 2.7e-141 505.8 346 76.6
Potri.018G060500 Populus trichocarpa HOM05D005314 ORTHO05D006522 2.7e-141 505.8 346 76.6
AL6G22740 Arabidopsis lyrata HOM05D005314 ORTHO05D006522 3.5e-141 505.4 338 76.0
Carub.0006s1050 Capsella rubella HOM05D005314 ORTHO05D006522 4.6e-141 505.0 337 76.0
AUR62009122 Chenopodium quinoa HOM05D005314 ORTHO05D006522 4.6e-141 505.0 344 75.6
AT5G11960 Arabidopsis thaliana HOM05D005314 ORTHO05D006522 6.0e-141 504.6 338 76.0
CAN.G130.11 Capsicum annuum HOM05D005314 ORTHO05D006522 1.0e-140 503.8 346 76.0
Potri.006G226000 Populus trichocarpa HOM05D005314 ORTHO05D006522 1.0e-140 503.8 346 77.2
THA.LOC104811236 Tarenaya hassleriana HOM05D005314 ORTHO05D006522 1.3e-140 503.4 344 75.6
SGA_v2.0_scaffold20G09204 Striga asiatica HOM05D005314 ORTHO05D006522 1.8e-140 503.1 385 69.6
Sopen06g012940 Solanum pennellii HOM05D005314 ORTHO05D006522 3.0e-140 502.3 346 75.4
Aa31LG3G15270 Aethionema arabicum HOM05D005314 ORTHO05D006522 5.1e-140 501.5 356 73.3
Solyc06g036780.3 Solanum lycopersicum HOM05D005314 ORTHO05D006522 1.1e-139 500.4 346 75.4
Sed0001440 Sechium edule HOM05D005314 ORTHO05D006522 2.5e-139 499.2 338 76.6
ECA233G4949 Erigeron canadensis HOM05D005314 ORTHO05D006522 7.4e-139 497.7 340 78.2
FAN27G1630 Fragaria x ananassa HOM05D005314 ORTHO05D006522 1.6e-138 496.5 346 76.0
Ca_13152_v3 Cicer arietinum L. HOM05D005314 ORTHO05D006522 1.2e-136 490.3 346 74.6
Lsat_1_v5_gn_6_14601 Lactuca sativa HOM05D005314 ORTHO05D006522 3.4e-136 488.8 340 77.4
TPR.G13039 Trifolium pratense HOM05D005314 ORTHO05D006522 7.6e-136 487.6 348 74.4
Lj1g0000731 Lotus japonicus HOM05D005314 ORTHO05D006522 1.0e-135 487.3 346 73.1
HanXRQChr08g0226511 Helianthus annuus HOM05D005314 ORTHO05D006522 1.3e-135 486.9 344 75.6
Phvul.009G078900 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 1.3e-135 486.9 336 72.6
Ciclev10008891m.g Citrus clementina HOM05D005314 ORTHO05D006522 3.8e-135 485.3 338 75.7
Lalb_Chr11g0063171 Lupinus albus HOM05D005314 ORTHO05D006522 3.8e-135 485.3 346 73.1
Peaxi162Scf01088g00005 Petunia axillaris HOM05D005314 ORTHO05D006522 6.5e-135 484.6 325 75.7
Phvul.001G037500 Phaseolus vulgaris HOM05D005314 ORTHO05D006522 6.5e-135 484.6 346 72.8
Glyma.06G053100 Glycine max HOM05D005314 ORTHO05D006522 8.5e-135 484.2 348 73.3
Hund19438 Selenicereus undatus HOM05D005314 ORTHO05D006522 2.5e-134 482.6 344 73.8
MELO3C016882.2 Cucumis melo HOM05D005314 ORTHO05D006522 3.2e-134 482.3 338 74.9
Psat6g021480 Pisum sativum HOM05D005314 ORTHO05D006522 7.2e-134 481.1 346 74.0
Rhsim11G0042200 Rhododendron simsii HOM05D005314 ORTHO05D006522 9.3e-134 480.7 368 71.5
ATR0789G137 Amborella trichopoda HOM05D005314 ORTHO05D006522 1.6e-133 479.9 346 72.8
Glyma.14G097400 Glycine max HOM05D005314 ORTHO05D006522 1.6e-133 479.9 352 71.6
Medtr1g015820 Medicago truncatula HOM05D005314 ORTHO05D006522 3.6e-133 478.8 348 73.9
CDE06G1634 Ceratophyllum demersum HOM05D005314 ORTHO05D006522 6.1e-133 478.0 346 74.0
HPP92_007653 Vanilla planifolia HOM05D005314 ORTHO05D006522 2.5e-131 472.6 344 71.2
VMungo0647G2045 Vigna mungo HOM05D005314 ORTHO05D006522 1.7e-130 469.9 359 69.6
MBI01_g21122_MAGBIO Magnolia biondii HOM05D005314 ORTHO05D006522 3.1e-129 465.7 337 73.6
Sabra18G0054400 Salix brachista HOM05D005314 ORTHO05D006522 5.9e-128 461.5 416 63.2
FAN15G2750 Fragaria x ananassa HOM05D005314 ORTHO05D006522 2.2e-127 459.5 309 77.7
FAN24G2134 Fragaria x ananassa HOM05D005314 ORTHO05D006522 5.0e-127 458.4 309 77.3
VMungo1309G2963 Vigna mungo HOM05D005314 ORTHO05D006522 5.0e-127 458.4 336 69.6
Atru.chr7.1939 Acer truncatum HOM05D005314 ORTHO05D006522 7.2e-126 454.5 272 84.9
Lalb_Chr22g0356141 Lupinus albus HOM05D005314 ORTHO05D006522 3.6e-125 452.2 307 74.6
Lalb_Chr14g0366381 Lupinus albus HOM05D005314 ORTHO05D006522 2.8e-122 442.6 272 80.1
arahy.Tifrunner.gnm1.ann1.VQ1HGR Arachis hypogaea HOM05D005314 ORTHO05D006522 5.3e-121 438.3 346 70.2
DCAR_007733 Daucus carota HOM05D005314 ORTHO05D006522 2.2e-119 433.0 400 61.5
Sc23g0005690 Simmondsia chinensis HOM05D005314 ORTHO05D006522 3.8e-119 432.2 344 67.7
Glyma.04G052700 Glycine max HOM05D005314 ORTHO05D006522 9.4e-118 427.6 309 71.8
Lj8A530G14 Lonicera japonica HOM05D005314 ORTHO05D006522 1.6e-117 426.8 296 77.4
Glyma.17G227100 Glycine max HOM05D005314 ORTHO05D006522 1.3e-114 417.2 346 66.2
Oeu003996.1 Olea europaea HOM05D005314 ORTHO05D006522 5.3e-113 411.8 310 72.6
arahy.Tifrunner.gnm1.ann1.UTD444 Arachis hypogaea HOM05D005314 ORTHO05D006522 8.0e-109 397.9 346 63.0
Sabra06G0174700 Salix brachista HOM05D005314 ORTHO05D006522 5.2e-108 395.2 419 56.3
arahy.Tifrunner.gnm1.ann1.GAY7D4 Arachis hypogaea HOM05D005314 ORTHO05D006522 9.7e-107 391.0 346 62.4
vmacro00123 Vaccinium macrocarpon HOM05D005314 ORTHO05D006522 8.2e-106 387.9 293 71.7
Dinv28005 Davidia involucrata HOM05D005314 ORTHO05D006522 2.1e-101 373.2 222 82.9
Duzib150G1607 Durio zibethinus HOM05D005314 ORTHO05D006522 8.0e-101 371.3 222 82.0
unitig_88.g27677 Utricularia gibba HOM05D005314 ORTHO05D006522 8.8e-100 367.9 385 55.3
EL10Ac2g03829 Beta vulgaris HOM05D005314 ORTHO05D006522 3.7e-98 362.5 344 59.9
arahy.Tifrunner.gnm1.ann1.6D5JL1 Arachis hypogaea HOM05D005314 ORTHO05D006522 3.6e-93 345.9 346 59.2
Sed0024799 Sechium edule HOM05D005314 ORTHO05D006522 7.0e-89 331.6 243 72.4
Gohir.D07G021900 Gossypium hirsutum HOM05D005314 ORTHO05D006522 9.2e-89 331.3 204 80.9
Nitab4.5_0000972g0030 Nicotiana tabacum HOM05D005314 ORTHO05D006522 3.0e-84 316.2 436 48.2
Mapoly0049s0128 Marchantia polymorpha HOM05D005314 ORTHO05D006522 2.4e-81 306.6 335 50.1
Ah.10g034130 Amaranthus hybridus HOM05D005314 ORTHO05D006522 1.8e-76 290.4 250 65.2
Nitab4.5_0000268g0140 Nicotiana tabacum HOM05D005314 ORTHO05D006522 4.0e-76 289.3 345 51.0
Zm00001eb155260 Zea mays HOM05D005314 ORTHO05D006522 5.2e-76 288.9 250 62.0
MD11G1243300 Malus domestica HOM05D005314 ORTHO05D006522 7.0e-73 278.5 169 81.1
CARHR201170 Cardamine hirsuta HOM05D005314 ORTHO05D006522 1.7e-71 273.9 201 72.6
Pp3c7_50 Physcomitrium patens HOM05D005314 ORTHO05D006522 8.9e-68 261.5 290 47.6
Hund03325 Selenicereus undatus HOM05D005314 ORTHO05D006522 5.2e-60 235.7 260 53.5
Os01g0708300 Oryza sativa ssp. japonica HOM05D005314 ORTHO05D006522 5.1e-55 219.2 144 72.9
Cpa.g.sc7.160 Carica papaya HOM05D005314 ORTHO05D006522 4.3e-54 216.1 144 76.4
Lj7A260G18 Lonicera japonica HOM05D005314 ORTHO05D006522 5.3e-52 209.1 238 52.1
RcHm_v2.0_Chr1g0383701 Rosa chinensis HOM05D005314 ORTHO05D006522 2.4e-49 200.3 154 64.9
Cpa.g.sc7.159 Carica papaya HOM05D005314 ORTHO05D006522 4.2e-49 199.5 166 66.3
CBR_g50008 Chara braunii HOM05D005314 ORTHO05D006522 3.9e-47 193.0 360 36.7
AUR62039137 Chenopodium quinoa HOM05D005314 ORTHO05D006522 4.0e-44 183.0 131 72.5
CSS0003098 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 9.0e-44 181.8 110 83.6
arahy.Tifrunner.gnm1.ann1.IMU44M Arachis hypogaea HOM05D005314 ORTHO05D006522 2.9e-42 176.8 185 58.9
Cre10.g419700 Chlamydomonas reinhardtii HOM05D005314 ORTHO05D006522 7.9e-40 168.7 328 34.8
PRCOL_00001271 Prasinoderma coloniale HOM05D005314 ORTHO05D006522 3.7e-37 159.8 322 32.3
MCO12G408 Micromonas commoda HOM05D005314 ORTHO05D006522 5.8e-35 152.5 311 32.8
PGSC0003DMG400031356 Solanum tuberosum HOM05D005314 ORTHO05D006522 2.1e-32 144.1 125 66.4
BcaB03g16563 Brassica carinata HOM05D005314 ORTHO05D006522 1.3e-29 134.8 113 63.7
Oeu040341.1 Olea europaea HOM05D005314 ORTHO05D006522 6.5e-26 122.5 74 82.4
CSS0034519 Camellia sinensis var. sinensis HOM05D005314 ORTHO05D006522 2.4e-20 104.0 95 64.2
Gohir.D07G021800 Gossypium hirsutum HOM05D005314 ORTHO05D006522 5.3e-20 102.8 96 61.5
arahy.Tifrunner.gnm1.ann1.TY68CU Arachis hypogaea HOM05D005314 ORTHO05D005864 6.9e-20 102.4 107 62.6
SEGI_34785 Sequoiadendron giganteum HOM05D005314 ORTHO05D006522 6.9e-20 102.4 73 68.5


User provided reference genes

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