Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 4.9e-202 707.6 363 100.0
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 1.3e-194 682.9 363 97.0
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 2.9e-101 372.9 365 56.4
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 1.3e-93 347.4 369 53.4
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 2.9e-93 346.3 369 54.2
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 4.9e-93 345.5 326 56.4
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 8.4e-93 344.7 369 53.1
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 1.4e-92 344.0 352 55.4
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 2.4e-92 343.2 368 53.0
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 3.2e-92 342.8 299 62.2
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 4.6e-91 339.0 365 54.2
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 6.0e-91 338.6 295 60.0
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 1.3e-90 337.4 358 53.4
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 3.9e-90 335.9 292 59.2
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 1.9e-89 333.6 333 53.8
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 1.9e-89 333.6 308 57.8
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 2.5e-89 333.2 307 58.6
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 5.6e-89 332.0 296 57.8
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 5.6e-89 332.0 328 55.2
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 5.6e-89 332.0 296 59.5
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 9.6e-89 331.3 368 52.4
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 1.3e-88 330.9 320 58.4
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 1.3e-88 330.9 368 50.8
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 1.3e-88 330.9 331 55.3
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 1.6e-88 330.5 366 51.9
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 1.6e-88 330.5 366 51.6
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 2.8e-88 329.7 331 55.0
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 4.8e-88 328.9 341 53.7
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 6.2e-88 328.6 328 54.3
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 1.1e-87 327.8 292 57.9
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 1.8e-87 327.0 366 52.2
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 1.5e-86 323.9 294 58.8
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 2.6e-86 323.2 330 54.5
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 5.8e-86 322.0 311 56.3
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 9.9e-86 321.2 278 60.1
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 1.7e-85 320.5 299 57.9
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 2.2e-85 320.1 362 51.4
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 2.2e-85 320.1 259 62.2
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 6.4e-85 318.5 366 50.8
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 8.4e-85 318.2 366 50.3
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.9e-84 317.0 366 50.3
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 3.2e-84 316.2 366 50.0
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 4.2e-84 315.8 366 50.0
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 5.5e-84 315.5 372 51.3
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 1.6e-83 313.9 272 59.9
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 2.1e-83 313.5 304 54.6
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 3.9e-82 309.3 288 54.2
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 6.7e-82 308.5 259 57.9
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 6.7e-82 308.5 305 56.1
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 8.7e-82 308.1 290 53.8
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 1.5e-81 307.4 272 59.2
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 2.5e-81 306.6 276 58.3
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 3.3e-81 306.2 284 56.7
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 4.3e-81 305.8 292 54.5
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 1.6e-80 303.9 371 48.5
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 1.6e-80 303.9 259 59.1
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 2.1e-80 303.5 326 50.3
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 4.8e-80 302.4 297 55.6
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 6.2e-80 302.0 298 55.4
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 1.4e-79 300.8 337 50.7
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 3.1e-79 299.7 292 54.1
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 5.3e-79 298.9 316 51.6
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 1.2e-78 297.7 335 51.3
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 4.5e-78 295.8 273 56.4
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 5.8e-78 295.4 291 53.6
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 7.6e-78 295.0 284 56.0
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 1.7e-77 293.9 283 55.8
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 1.7e-77 293.9 285 55.1
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 2.2e-77 293.5 297 52.9
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 2.2e-77 293.5 306 52.9
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 2.9e-77 293.1 304 54.3
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 4.9e-77 292.4 304 52.0
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 6.5e-77 292.0 297 53.2
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 8.4e-77 291.6 297 52.5
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 1.1e-76 291.2 316 52.2
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 1.4e-76 290.8 345 46.7
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 1.9e-76 290.4 297 51.5
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 2.5e-76 290.0 304 53.0
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 9.3e-76 288.1 308 50.6
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 1.2e-75 287.7 284 53.9
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 1.6e-75 287.3 272 55.9
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 1.6e-75 287.3 276 55.1
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 4.6e-75 285.8 269 57.2
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 6.0e-75 285.4 283 54.8
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 1.3e-74 284.3 272 54.4
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 3.0e-74 283.1 280 55.0
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 3.0e-74 283.1 290 51.7
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 3.9e-74 282.7 280 55.0
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 6.7e-74 282.0 315 50.5
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 2.5e-73 280.0 274 54.0
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 2.8e-72 276.6 306 51.3
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 3.7e-72 276.2 306 51.3
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 4.8e-72 275.8 266 51.9
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 1.8e-71 273.9 270 54.1
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 1.5e-70 270.8 313 48.9
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 3.4e-70 269.6 295 50.8
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 3.8e-69 266.2 235 57.9
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 2.5e-68 263.5 334 47.0
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 2.7e-67 260.0 261 53.3
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 6.1e-67 258.8 215 60.0
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 1.5e-65 254.2 271 51.3
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 3.3e-65 253.1 235 58.3
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 7.9e-59 231.9 240 52.5
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 1.4e-58 231.1 261 49.8
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 5.5e-44 182.6 142 64.1
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 7.7e-38 162.2 162 54.3
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 4.5e-30 136.3 313 33.9
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 5.9e-30 136.0 139 52.5
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 2.6e-17 94.0 201 35.8
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 4.1e-15 86.7 79 57.0
ATR0693G306 Amborella trichopoda HOM05D006917 ORTHO05D008297 9.2e-15 85.5 133 44.4
Pp3c7_25590 Physcomitrium patens HOM05D037891 ORTHO05D008297 6.0e-14 82.8 305 27.5
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 7.3e-12 75.9 294 26.2
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 1.5e-09 68.2 80 52.5
SMO300G0012 Selaginella moellendorffii HOM05D006917 ORTHO05D008297 7.0e-07 59.3 260 25.4
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 2.7e-06 57.4 79 46.8


User provided reference genes

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