Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6323 Papaver somniferum HOM05D006680 ORTHO05D008206 7.7e-62 240.4 126 100.0
PSO832G1781 Papaver somniferum HOM05D006680 ORTHO05D008206 6.1e-59 230.7 126 96.8
Nn4g25792 Nelumbo nucifera HOM05D006680 ORTHO05D008206 6.2e-35 151.0 124 65.3
Aqoxy2G02951 Aquilegia oxysepala HOM05D006680 ORTHO05D008206 8.1e-35 150.6 124 65.3
Atru.chr4.2870 Acer truncatum HOM05D006680 ORTHO05D008206 6.8e-34 147.5 114 69.3
Lalb_Chr13g0303561 Lupinus albus HOM05D006680 ORTHO05D008206 8.9e-34 147.1 122 64.8
Ca_21488_v3 Cicer arietinum L. HOM05D006680 ORTHO05D008206 2.6e-33 145.6 123 65.0
TAR370G0002 Trochodendron aralioides HOM05D006680 ORTHO05D008206 5.8e-33 144.4 119 66.4
BraA05t22848Z Brassica rapa HOM05D006680 ORTHO05D008206 1.3e-32 143.3 119 64.7
Ciclev10006049m.g Citrus clementina HOM05D006680 ORTHO05D008206 1.3e-32 143.3 124 62.1
Gohir.A10G164900 Gossypium hirsutum HOM05D006680 ORTHO05D008206 1.3e-32 143.3 126 61.9
Gohir.D10G171100 Gossypium hirsutum HOM05D006680 ORTHO05D008206 1.3e-32 143.3 126 61.9
Gorai.011G191100 Gossypium raimondii HOM05D006680 ORTHO05D008206 1.3e-32 143.3 126 61.9
Lalb_Chr07g0177791 Lupinus albus HOM05D006680 ORTHO05D008206 1.3e-32 143.3 122 62.3
A03p34950 Brassica napus HOM05D006680 ORTHO05D008206 2.2e-32 142.5 119 64.7
C03p42530 Brassica napus HOM05D006680 ORTHO05D008206 2.2e-32 142.5 119 64.7
BolC3t16523H Brassica oleracea HOM05D006680 ORTHO05D008206 2.2e-32 142.5 119 64.7
BraA03t12675Z Brassica rapa HOM05D006680 ORTHO05D008206 2.2e-32 142.5 119 64.7
Dinv29759 Davidia involucrata HOM05D006680 ORTHO05D008206 2.2e-32 142.5 117 65.0
Prupe.1G134500 Prunus persica HOM05D006680 ORTHO05D008206 2.2e-32 142.5 123 64.2
Thecc.04G286300 Theobroma cacao HOM05D006680 ORTHO05D008206 2.9e-32 142.1 122 64.8
ClCG00G005610 Citrullus lanatus HOM05D006680 ORTHO05D008206 4.9e-32 141.4 122 61.5
Cpa.g.sc16.184 Carica papaya HOM05D006680 ORTHO05D008206 6.4e-32 141.0 114 65.8
THA.LOC104818922 Tarenaya hassleriana HOM05D006680 ORTHO05D008206 6.4e-32 141.0 124 62.1
VMungo1215G2846 Vigna mungo HOM05D006680 ORTHO05D008206 6.4e-32 141.0 121 65.3
Duzib151G0306 Durio zibethinus HOM05D006680 ORTHO05D008206 8.4e-32 140.6 124 61.3
MD13G1167200 Malus domestica HOM05D006680 ORTHO05D008206 1.1e-31 140.2 125 63.2
RcHm_v2.0_Chr4g0422811 Rosa chinensis HOM05D006680 ORTHO05D008206 1.1e-31 140.2 123 65.0
CAN.G129.31 Capsicum annuum HOM05D006680 ORTHO05D008206 1.9e-31 139.4 121 63.6
Nitab4.5_0002761g0070 Nicotiana tabacum HOM05D006680 ORTHO05D008206 1.9e-31 139.4 124 61.3
FvH4_4g18340 Fragaria vesca HOM05D006680 ORTHO05D008206 2.4e-31 139.0 123 65.0
FAN07G2082 Fragaria x ananassa HOM05D006680 ORTHO05D008206 2.4e-31 139.0 123 65.0
FAN12G3601 Fragaria x ananassa HOM05D006680 ORTHO05D008206 2.4e-31 139.0 123 65.0
FAN17G1034 Fragaria x ananassa HOM05D006680 ORTHO05D008206 2.4e-31 139.0 123 65.0
TWI09G0327 Tripterygium wilfordii HOM05D006680 ORTHO05D008206 3.2e-31 138.7 124 62.9
Manes.15G011600 Manihot esculenta HOM05D006680 ORTHO05D008206 5.4e-31 137.9 120 62.5
BcaC05g29822 Brassica carinata HOM05D006680 ORTHO05D008206 9.2e-31 137.1 120 64.2
BolC5t34701H Brassica oleracea HOM05D006680 ORTHO05D008206 9.2e-31 137.1 120 64.2
A05p41250 Brassica napus HOM05D006680 ORTHO05D008206 1.6e-30 136.3 114 64.9
FAN12G3976 Fragaria x ananassa HOM05D006680 ORTHO05D008206 1.6e-30 136.3 123 64.2
Gohir.D09G239200 Gossypium hirsutum HOM05D006680 ORTHO05D008206 1.6e-30 136.3 124 59.7
Gorai.006G261900 Gossypium raimondii HOM05D006680 ORTHO05D008206 1.6e-30 136.3 124 59.7
Nn3g21479 Nelumbo nucifera HOM05D006680 ORTHO05D008206 1.6e-30 136.3 112 68.8
Nitab4.5_0003466g0010 Nicotiana tabacum HOM05D006680 ORTHO05D008206 1.6e-30 136.3 121 61.2
ECA240G4018 Erigeron canadensis HOM05D006680 ORTHO05D008206 3.5e-30 135.2 117 65.0
Gohir.A09G238300 Gossypium hirsutum HOM05D006680 ORTHO05D008206 3.5e-30 135.2 124 59.7
CiPaw.01G147500 Carya illinoinensis HOM05D006680 ORTHO05D008206 6.0e-30 134.4 122 59.0
Lsat_1_v5_gn_6_95660 Lactuca sativa HOM05D006680 ORTHO05D008206 6.0e-30 134.4 126 60.3
MBI19_g25353_MAGBIO Magnolia biondii HOM05D006680 ORTHO05D008206 6.0e-30 134.4 122 61.5
Manes.03G196700 Manihot esculenta HOM05D006680 ORTHO05D008206 7.8e-30 134.0 111 64.9
Cc03_g01760 Coffea canephora HOM05D006680 ORTHO05D008206 1.0e-29 133.7 121 58.7
Peaxi162Scf00246g00103 Petunia axillaris HOM05D006680 ORTHO05D008206 1.0e-29 133.7 118 63.6
PGSC0003DMG400011317 Solanum tuberosum HOM05D006680 ORTHO05D008206 1.0e-29 133.7 114 63.2
CSS0010580 Camellia sinensis var. sinensis HOM05D006680 ORTHO05D008206 1.3e-29 133.3 125 60.8
Sabra10G0008200 Salix brachista HOM05D006680 ORTHO05D008206 1.3e-29 133.3 114 63.2
Migut.G00148 Erythranthe guttata HOM05D006680 ORTHO05D008206 1.7e-29 132.9 114 62.3
Glyma.07G246700 Glycine max HOM05D006680 ORTHO05D008206 1.7e-29 132.9 124 61.3
Sopen01g028370 Solanum pennellii HOM05D006680 ORTHO05D008206 1.7e-29 132.9 114 63.2
Sed0015603 Sechium edule HOM05D006680 ORTHO05D008206 2.3e-29 132.5 122 59.0
CSS0014864 Camellia sinensis var. sinensis HOM05D006680 ORTHO05D008206 3.0e-29 132.1 125 60.8
Duzib212G0294 Durio zibethinus HOM05D006680 ORTHO05D008206 3.0e-29 132.1 123 60.2
Potri.008G221000 Populus trichocarpa HOM05D006680 ORTHO05D008206 3.0e-29 132.1 114 62.3
QL06p009590 Quercus lobata HOM05D006680 ORTHO05D008206 3.0e-29 132.1 115 61.7
Potri.010G013100 Populus trichocarpa HOM05D006680 ORTHO05D008206 3.9e-29 131.7 117 62.4
PGSC0003DMG400004705 Solanum tuberosum HOM05D006680 ORTHO05D008206 3.9e-29 131.7 122 63.9
Hma1.2p1_1185F.1_g265000 Hydrangea macrophylla HOM05D006680 ORTHO05D008206 5.1e-29 131.3 120 59.2
Sc19g0005290 Simmondsia chinensis HOM05D006680 ORTHO05D008206 5.1e-29 131.3 121 59.5
Sc19g0005370 Simmondsia chinensis HOM05D006680 ORTHO05D008206 5.1e-29 131.3 121 59.5
Medtr4g120020 Medicago truncatula HOM05D006680 ORTHO05D008206 6.6e-29 131.0 123 61.8
Solyc12g099500.2 Solanum lycopersicum HOM05D006680 ORTHO05D008206 6.6e-29 131.0 122 63.1
Sopen12g034170 Solanum pennellii HOM05D006680 ORTHO05D008206 6.6e-29 131.0 122 63.1
DCAR_027070 Daucus carota HOM05D006680 ORTHO05D008206 8.6e-29 130.6 118 61.0
Oeu001107.1 Olea europaea HOM05D006680 ORTHO05D008206 1.1e-28 130.2 124 58.1
Ah.08g214570 Amaranthus hybridus HOM05D006680 ORTHO05D008206 1.5e-28 129.8 123 62.6
Peaxi162Scf00646g00027 Petunia axillaris HOM05D006680 ORTHO05D008206 1.5e-28 129.8 114 64.0
CiPaw.02G082300 Carya illinoinensis HOM05D006680 ORTHO05D008206 1.9e-28 129.4 115 60.0
Oeu063359.1 Olea europaea HOM05D006680 ORTHO05D008206 9.6e-28 127.1 114 60.5
AUR62040379 Chenopodium quinoa HOM05D006680 ORTHO05D008206 1.2e-27 126.7 123 61.0
Carub.0003s0642 Capsella rubella HOM05D006680 ORTHO05D008206 1.6e-27 126.3 103 68.9
MSTRG.3906 Avicennia marina HOM05D006680 ORTHO05D008206 3.6e-27 125.2 116 63.8
SGA_v2.0_scaffold67G22622 Striga asiatica HOM05D006680 ORTHO05D008206 3.6e-27 125.2 114 58.8
PSO170G5007 Papaver somniferum HOM05D006680 ORTHO05D008206 4.7e-27 124.8 104 69.2
DCAR_002469 Daucus carota HOM05D006680 ORTHO05D008206 8.1e-27 124.0 117 59.8
CAN.G484.39 Capsicum annuum HOM05D006680 ORTHO05D008206 1.1e-26 123.6 117 59.8
PSO017G4993 Papaver somniferum HOM05D006680 ORTHO05D008206 1.1e-26 123.6 104 68.3
MBI18_g06870_MAGBIO Magnolia biondii HOM05D006680 ORTHO05D008206 1.4e-26 123.2 126 59.5
Lj4g0016566 Lotus japonicus HOM05D006680 ORTHO05D008206 1.8e-26 122.9 97 69.1
CARHR081510 Cardamine hirsuta HOM05D006680 ORTHO05D008206 2.4e-26 122.5 104 67.3
PGR004G0310 Punica granatum HOM05D006680 ORTHO05D008206 3.1e-26 122.1 124 57.3
AT3G06890 Arabidopsis thaliana HOM05D006680 ORTHO05D008206 6.8e-26 120.9 105 66.7
Thhalv10021931m.g Eutrema salsugineum HOM05D006680 ORTHO05D008206 6.8e-26 120.9 112 59.8
AL3G18020 Arabidopsis lyrata HOM05D006680 ORTHO05D008206 8.9e-26 120.6 105 66.7
Os03g0343800 Oryza sativa ssp. japonica HOM05D006680 ORTHO05D008206 2.0e-25 119.4 115 56.5
DCAR_030521 Daucus carota HOM05D006680 ORTHO05D008206 7.6e-25 117.5 117 59.0
HanXRQChr13g0419971 Helianthus annuus HOM05D006680 ORTHO05D008206 3.8e-24 115.2 121 55.4
Psat4g026840 Pisum sativum HOM05D006680 ORTHO05D008206 4.9e-24 114.8 98 63.3
Sp3g05850 Schrenkiella parvula HOM05D006680 ORTHO05D008206 6.4e-24 114.4 100 62.0
TPR.G3164 Trifolium pratense HOM05D006680 ORTHO05D008206 1.4e-23 113.2 101 64.4
CANSAT78G1139 Cannabis sativa HOM05D006680 ORTHO05D008206 2.4e-23 112.5 99 59.6
Zm00001eb016470 Zea mays HOM05D006680 ORTHO05D008206 4.2e-23 111.7 119 52.9
Zm00001eb124100 Zea mays HOM05D006680 ORTHO05D008206 4.2e-23 111.7 111 55.9
Sabra10G0008300 Salix brachista HOM05D006680 ORTHO05D008206 4.6e-22 108.2 116 56.9
PGR031G3343 Punica granatum HOM05D006680 ORTHO05D008206 6.0e-22 107.8 120 48.3
Phvul.003G097003 Phaseolus vulgaris HOM05D006680 ORTHO05D008206 1.7e-21 106.3 102 61.8
HanXRQChr03g0089341 Helianthus annuus HOM05D006680 ORTHO05D008206 3.9e-21 105.1 124 51.6
Zm00001eb394930 Zea mays HOM05D006680 ORTHO05D008206 1.9e-20 102.8 99 59.6
Rhsim04G0223700 Rhododendron simsii HOM05D006680 ORTHO05D008206 1.1e-18 97.1 101 56.4
Rhsim09G0007300 Rhododendron simsii HOM05D006680 ORTHO05D008206 1.1e-18 97.1 101 56.4
HPP92_000110 Vanilla planifolia HOM05D006680 ORTHO05D008206 1.1e-18 97.1 123 47.2
ATR0796G044 Amborella trichopoda HOM05D006680 ORTHO05D008206 1.4e-18 96.7 122 46.7
MD16G1168200 Malus domestica HOM05D006680 ORTHO05D008206 9.0e-18 94.0 131 51.1
Thecc.09G272700 Theobroma cacao HOM05D006680 ORTHO05D008206 4.4e-17 91.7 85 62.4
Eucgr.H03932 Eucalyptus grandis HOM05D006680 ORTHO05D008206 1.3e-16 90.1 128 49.2
TAR633G0386 Trochodendron aralioides HOM05D006680 ORTHO05D008206 3.8e-16 88.6 116 49.1
Os07g0673801 Oryza sativa ssp. japonica HOM05D006680 ORTHO05D008206 4.9e-16 88.2 97 50.5
Thecc.05G268700 Theobroma cacao HOM05D006680 ORTHO05D008206 1.9e-15 86.3 95 53.7
unitig_32.g11869 Utricularia gibba HOM05D006680 ORTHO05D008206 6.6e-13 77.8 114 43.0


User provided reference genes

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