Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6319 Papaver somniferum HOM05D005306 ORTHO05D006158 3.7e-211 738.4 519 100.0
PSO447G0179 Papaver somniferum HOM05D005306 ORTHO05D006158 2.4e-165 586.3 519 87.5
TAR625G0717 Trochodendron aralioides HOM05D005306 ORTHO05D006158 3.5e-52 210.3 526 33.7
TAR381G0610 Trochodendron aralioides HOM05D005306 ORTHO05D006158 2.0e-47 194.5 171 61.4
Aqoxy6G00585 Aquilegia oxysepala HOM05D005306 ORTHO05D006158 3.5e-44 183.7 176 57.4
Nn5g29063 Nelumbo nucifera HOM05D005306 ORTHO05D006158 5.1e-43 179.9 518 32.0
Actinidia36600 Actinidia chinensis HOM05D005306 ORTHO05D006158 3.3e-42 177.2 187 49.7
Dinv21926 Davidia involucrata HOM05D005306 ORTHO05D006158 4.8e-41 173.3 520 31.0
Duzib147G0288 Durio zibethinus HOM05D005306 ORTHO05D006158 1.4e-40 171.8 188 50.0
Prupe.6G182000 Prunus persica HOM05D005306 ORTHO05D006158 4.1e-40 170.2 181 53.0
Nn1g05302 Nelumbo nucifera HOM05D005306 ORTHO05D006158 5.3e-40 169.9 174 56.3
Dinv16302 Davidia involucrata HOM05D005306 ORTHO05D006158 1.5e-39 168.3 159 57.2
Thecc.01G104400 Theobroma cacao HOM05D005306 ORTHO05D006158 1.5e-39 168.3 186 50.0
Gohir.A11G052900 Gossypium hirsutum HOM05D005306 ORTHO05D006158 2.6e-39 167.5 176 54.0
Lj4A885T20 Lonicera japonica HOM05D005306 ORTHO05D006158 2.6e-39 167.5 189 50.3
QL06p049976 Quercus lobata HOM05D005306 ORTHO05D006158 2.6e-39 167.5 174 51.7
Gorai.007G061500 Gossypium raimondii HOM05D005306 ORTHO05D006158 2.9e-38 164.1 181 51.9
Potri.007G090500 Populus trichocarpa HOM05D005306 ORTHO05D006158 3.8e-38 163.7 162 54.3
CSS0034809 Camellia sinensis var. sinensis HOM05D005306 ORTHO05D006158 1.1e-37 162.2 168 50.6
CiPaw.03G140300 Carya illinoinensis HOM05D005306 ORTHO05D006158 1.1e-37 162.2 174 50.6
MD01G1027000 Malus domestica HOM05D005306 ORTHO05D006158 1.9e-37 161.4 192 50.5
Manes.12G136900 Manihot esculenta HOM05D005306 ORTHO05D006158 2.5e-37 161.0 148 56.1
Sabra07G0074200 Salix brachista HOM05D005306 ORTHO05D006158 2.5e-37 161.0 143 58.0
Cfa002685 Carpinus fangiana HOM05D005306 ORTHO05D006158 3.2e-37 160.6 164 51.8
COL.COLO4_09939 Corchorus olitorius HOM05D005306 ORTHO05D006158 4.2e-37 160.2 201 46.8
CiPaw.04G097600 Carya illinoinensis HOM05D005306 ORTHO05D006158 7.2e-37 159.5 161 52.8
Gohir.D12G096600 Gossypium hirsutum HOM05D005306 ORTHO05D006158 7.2e-37 159.5 200 49.0
Gorai.008G104700 Gossypium raimondii HOM05D005306 ORTHO05D006158 7.2e-37 159.5 200 49.0
GSVIVG01004251001 Vitis vinifera HOM05D005306 ORTHO05D006158 7.2e-37 159.5 182 50.5
Cpa.g.sc20.237 Carica papaya HOM05D005306 ORTHO05D006158 1.6e-36 158.3 174 48.9
Atru.chr4.126 Acer truncatum HOM05D005306 ORTHO05D006158 4.6e-36 156.8 199 47.7
Ciclev10025982m.g Citrus clementina HOM05D005306 ORTHO05D006158 4.6e-36 156.8 189 47.6
Gohir.A12G079125 Gossypium hirsutum HOM05D005306 ORTHO05D006158 1.0e-35 155.6 200 48.5
Cc07_g15400 Coffea canephora HOM05D005306 ORTHO05D006158 1.3e-35 155.2 170 47.1
Haze_24956 Corylus avellana HOM05D005306 ORTHO05D006158 1.8e-35 154.8 165 50.9
QL04p017893 Quercus lobata HOM05D005306 ORTHO05D006158 3.0e-35 154.1 174 49.4
Potri.005G077400 Populus trichocarpa HOM05D005306 ORTHO05D006158 3.9e-35 153.7 186 47.8
TWI77G0207 Tripterygium wilfordii HOM05D005306 ORTHO05D006158 3.9e-35 153.7 196 44.4
MD15G1327000 Malus domestica HOM05D005306 ORTHO05D006158 5.1e-35 153.3 181 47.0
THA.LOC104818490 Tarenaya hassleriana HOM05D005306 ORTHO05D006158 3.3e-34 150.6 181 48.1
ClCG01G018910 Citrullus lanatus HOM05D005306 ORTHO05D006158 4.8e-33 146.7 188 48.4
CsaV3_6G045590 Cucumis sativus L. HOM05D005306 ORTHO05D006158 6.3e-33 146.4 189 46.6
THA.LOC104819305 Tarenaya hassleriana HOM05D005306 ORTHO05D006158 6.3e-33 146.4 165 46.1
CANSAT01G2249 Cannabis sativa HOM05D005306 ORTHO05D006158 1.8e-32 144.8 174 48.9
Hund13638 Selenicereus undatus HOM05D005306 ORTHO05D006158 1.8e-32 144.8 182 42.3
Eucgr.H04811 Eucalyptus grandis HOM05D005306 ORTHO05D006158 3.1e-32 144.1 185 46.5
MELO3C007770.2 Cucumis melo HOM05D005306 ORTHO05D006158 4.1e-32 143.7 188 45.2
Aa31LG1G16850 Aethionema arabicum HOM05D005306 ORTHO05D006158 1.2e-31 142.1 190 43.7
Sed0001570 Sechium edule HOM05D005306 ORTHO05D006158 2.0e-31 141.4 176 46.6
Sp6g33290 Schrenkiella parvula HOM05D005306 ORTHO05D006158 2.6e-31 141.0 151 50.3
BraA06t26127Z Brassica rapa HOM05D005306 ORTHO05D006158 7.7e-31 139.4 167 45.5
Lalb_Chr07g0185101 Lupinus albus HOM05D005306 ORTHO05D006158 1.3e-30 138.7 141 51.8
AUR62003775 Chenopodium quinoa HOM05D005306 ORTHO05D006158 1.7e-30 138.3 165 46.1
Thhalv10004547m.g Eutrema salsugineum HOM05D005306 ORTHO05D006158 1.7e-30 138.3 165 45.5
RcHm_v2.0_Chr2g0115081 Rosa chinensis HOM05D005306 ORTHO05D006158 2.2e-30 137.9 182 46.7
MBI05_g34472_MAGBIO Magnolia biondii HOM05D005306 ORTHO05D006158 2.9e-30 137.5 164 47.6
FAN23G1139 Fragaria x ananassa HOM05D005306 ORTHO05D006158 3.8e-30 137.1 178 47.2
BcaC01g02741 Brassica carinata HOM05D005306 ORTHO05D006158 1.1e-29 135.6 182 42.9
C03p61010 Brassica napus HOM05D005306 ORTHO05D006158 1.1e-29 135.6 182 42.9
BolC3t18363H Brassica oleracea HOM05D005306 ORTHO05D006158 1.1e-29 135.6 182 42.9
Phvul.002G254400 Phaseolus vulgaris HOM05D005306 ORTHO05D006158 1.1e-29 135.6 167 44.9
Sopen04g024710 Solanum pennellii HOM05D005306 ORTHO05D006158 1.1e-29 135.6 183 42.1
VMungo0251G2777 Vigna mungo HOM05D005306 ORTHO05D006158 1.1e-29 135.6 141 46.1
A06p31940 Brassica napus HOM05D005306 ORTHO05D006158 1.4e-29 135.2 182 42.9
Oeu032161.1 Olea europaea HOM05D005306 ORTHO05D006158 1.4e-29 135.2 172 44.2
Oeu032163.1 Olea europaea HOM05D005306 ORTHO05D006158 1.4e-29 135.2 172 44.2
TWI53G1353 Tripterygium wilfordii HOM05D005306 ORTHO05D006158 1.4e-29 135.2 185 42.7
ECA232G0837 Erigeron canadensis HOM05D005306 ORTHO05D006158 2.5e-29 134.4 172 43.0
FvH4_1g21240 Fragaria vesca HOM05D005306 ORTHO05D006158 2.5e-29 134.4 178 46.6
FAN28G0785 Fragaria x ananassa HOM05D005306 ORTHO05D006158 2.5e-29 134.4 178 47.2
AUR62002025 Chenopodium quinoa HOM05D005306 ORTHO05D006158 4.2e-29 133.7 172 42.4
Thhalv10014214m.g Eutrema salsugineum HOM05D005306 ORTHO05D006158 5.5e-29 133.3 140 48.6
Lalb_Chr13g0296051 Lupinus albus HOM05D005306 ORTHO05D006158 5.5e-29 133.3 143 48.3
C03p04880 Brassica napus HOM05D005306 ORTHO05D006158 9.4e-29 132.5 163 46.0
BolC3t13020H Brassica oleracea HOM05D005306 ORTHO05D006158 9.4e-29 132.5 163 46.0
Solyc04g054900.3 Solanum lycopersicum HOM05D005306 ORTHO05D006158 9.4e-29 132.5 181 42.0
Medtr8g090365 Medicago truncatula HOM05D005306 ORTHO05D006158 1.2e-28 132.1 175 44.0
Psat7g054080 Pisum sativum HOM05D005306 ORTHO05D006158 1.2e-28 132.1 186 43.5
CARHR203180 Cardamine hirsuta HOM05D005306 ORTHO05D006158 1.6e-28 131.7 161 46.0
HanXRQChr15g0484181 Helianthus annuus HOM05D005306 ORTHO05D006158 1.6e-28 131.7 173 46.2
AL8G42620 Arabidopsis lyrata HOM05D005306 ORTHO05D006158 2.1e-28 131.3 161 46.0
A03p04410 Brassica napus HOM05D005306 ORTHO05D006158 2.1e-28 131.3 163 46.0
BraA03t09786Z Brassica rapa HOM05D005306 ORTHO05D006158 2.1e-28 131.3 163 46.0
Carub.0008s2596 Capsella rubella HOM05D005306 ORTHO05D006158 2.1e-28 131.3 161 46.0
FAN26G1901 Fragaria x ananassa HOM05D005306 ORTHO05D006158 2.1e-28 131.3 178 46.1
Lsat_1_v5_gn_4_141700 Lactuca sativa HOM05D005306 ORTHO05D006158 2.7e-28 131.0 184 45.1
Carub.0006s0857 Capsella rubella HOM05D005306 ORTHO05D006158 1.0e-27 129.0 162 45.1
TPR.G2173 Trifolium pratense HOM05D005306 ORTHO05D006158 1.4e-27 128.6 120 55.8
AL6G20570 Arabidopsis lyrata HOM05D005306 ORTHO05D006158 1.8e-27 128.3 162 42.6
Ca_17725_v3 Cicer arietinum L. HOM05D005306 ORTHO05D006158 1.8e-27 128.3 161 46.0
AT5G10110 Arabidopsis thaliana HOM05D005306 ORTHO05D006158 3.0e-27 127.5 162 43.2
Gohir.D11G056300 Gossypium hirsutum HOM05D005306 ORTHO05D006158 3.0e-27 127.5 153 49.7
PGSC0003DMG400020626 Solanum tuberosum HOM05D005306 ORTHO05D006158 3.9e-27 127.1 188 39.9
Sp2g28200 Schrenkiella parvula HOM05D005306 ORTHO05D006158 5.1e-27 126.7 183 41.0
arahy.Tifrunner.gnm1.ann1.U0X1YR Arachis hypogaea HOM05D005306 ORTHO05D006158 8.8e-27 125.9 181 41.4
arahy.Tifrunner.gnm1.ann1.H9PZRL Arachis hypogaea HOM05D005306 ORTHO05D006158 1.1e-26 125.6 181 41.4
BcaB02g09863 Brassica carinata HOM05D005306 ORTHO05D006158 2.6e-26 124.4 187 41.7
Peaxi162Scf00422g00025 Petunia axillaris HOM05D005306 ORTHO05D006158 1.7e-25 121.7 178 38.2
DCAR_014236 Daucus carota HOM05D005306 ORTHO05D006158 2.2e-25 121.3 156 44.2
Os02g0752300 Oryza sativa ssp. japonica HOM05D005306 ORTHO05D006158 2.8e-25 120.9 109 53.2
AT5G65120 Arabidopsis thaliana HOM05D005306 ORTHO05D006158 2.4e-24 117.9 199 38.7
BraA09t36544Z Brassica rapa HOM05D005306 ORTHO05D006158 3.1e-24 117.5 116 49.1
BcaC04g23269 Brassica carinata HOM05D005306 ORTHO05D006158 4.1e-24 117.1 118 47.5
BcaB04g20004 Brassica carinata HOM05D005306 ORTHO05D006158 6.9e-24 116.3 116 48.3
Zm00001eb194230 Zea mays HOM05D005306 ORTHO05D006158 9.1e-24 115.9 118 50.0
MSTRG.2558 Avicennia marina HOM05D005306 ORTHO05D006158 1.2e-23 115.5 179 40.2
C09p10370 Brassica napus HOM05D005306 ORTHO05D006158 1.2e-23 115.5 116 48.3
BolC9t53937H Brassica oleracea HOM05D005306 ORTHO05D006158 1.2e-23 115.5 116 48.3
vmacro12947 Vaccinium macrocarpon HOM05D005306 ORTHO05D006158 1.5e-23 115.2 164 43.9
PGR102G1853 Punica granatum HOM05D005306 ORTHO05D006158 1.3e-22 112.1 155 42.6
Lj4g0005197 Lotus japonicus HOM05D005306 ORTHO05D006158 1.7e-22 111.7 135 46.7
MSTRG.23333 Avicennia marina HOM05D005306 ORTHO05D006158 2.9e-22 110.9 167 43.7
FAN19G0499 Fragaria x ananassa HOM05D005306 ORTHO05D006158 3.8e-22 110.5 156 45.5
SGA_v2.0_scaffold47G17761 Striga asiatica HOM05D005306 ORTHO05D006158 8.5e-22 109.4 190 38.4
Lsat_1_v5_gn_5_43440 Lactuca sativa HOM05D005306 ORTHO05D006158 1.4e-21 108.6 178 40.4
CARHR279030 Cardamine hirsuta HOM05D005306 ORTHO05D006158 3.2e-21 107.5 156 41.7
SalBow3G4455 Salvia bowleyana HOM05D005306 ORTHO05D006158 9.4e-21 105.9 185 34.6
Migut.H02371 Erythranthe guttata HOM05D005306 ORTHO05D006158 1.6e-20 105.1 189 37.0
Ah.02g122180 Amaranthus hybridus HOM05D005306 ORTHO05D006158 2.7e-20 104.4 175 37.7
CAN.G113.1 Capsicum annuum HOM05D005306 ORTHO05D006158 2.7e-20 104.4 182 37.4
EL10Ac6g15084 Beta vulgaris HOM05D005306 ORTHO05D006158 1.4e-19 102.1 187 35.3
Nitab4.5_0000104g0330 Nicotiana tabacum HOM05D005306 ORTHO05D006158 7.4e-18 96.3 168 38.1
Sed0017418 Sechium edule HOM05D005306 ORTHO05D006158 1.7e-17 95.1 123 43.9
Nitab4.5_0004120g0030 Nicotiana tabacum HOM05D005306 ORTHO05D006158 2.2e-17 94.7 169 37.3
A09p08930 Brassica napus HOM05D005306 ORTHO05D006158 2.8e-17 94.4 94 50.0
Aa31LG3G17030 Aethionema arabicum HOM05D005306 ORTHO05D006158 8.2e-17 92.8 181 37.0
ATR0564G355 Amborella trichopoda HOM05D005306 ORTHO05D006158 4.5e-15 87.0 173 36.4
TWI74G0266 Tripterygium wilfordii HOM05D005306 ORTHO05D006158 7.7e-15 86.3 154 37.0
CDE10G0726 Ceratophyllum demersum HOM05D005306 ORTHO05D006158 1.5e-13 82.0 105 45.7
THA.LOC104801720 Tarenaya hassleriana HOM05D005306 ORTHO05D006158 4.2e-13 80.5 100 45.0
Glyma.08G137700 Glycine max HOM05D005306 ORTHO05D006158 6.1e-12 76.6 177 32.8
HPP92_004303 Vanilla planifolia HOM05D005306 ORTHO05D006158 1.0e-11 75.9 99 41.4
SEGI_16914 Sequoiadendron giganteum HOM05D003400 ORTHO05D003687 2.3e-11 74.7 189 30.2
unitig_27.g25362 Utricularia gibba HOM05D033148 ORTHO05D006158 1.5e-10 72.0 105 41.9
BcaB02g09865 Brassica carinata HOM05D005306 ORTHO05D006158 2.0e-10 71.6 90 42.2
Sc16g0005560 Simmondsia chinensis HOM05D005306 ORTHO05D006158 4.4e-10 70.5 97 41.2
Glyma.05G180000 Glycine max HOM05D005306 ORTHO05D006158 3.7e-09 67.4 164 29.3
CDE10G0861 Ceratophyllum demersum HOM05D005306 ORTHO05D006158 3.5e-07 60.8 55 52.7
Nn5g26847 Nelumbo nucifera HOM05D003400 ORTHO05D003687 2.2e-06 58.2 137 29.2
AagrBONN_evm.TU.Sc2ySwM_344.4066 Anthoceros agrestis HOM05D003400 ORTHO05D003687 5.0e-06 57.0 115 31.3
Ah.03g142470 Amaranthus hybridus HOM05D005306 ORTHO05D006158 6.5e-06 56.6 111 36.0


User provided reference genes

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