Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6318 Papaver somniferum HOM05D003538 ORTHO05D004376 3.3e-303 1044.3 543 100.0
PSO210G5813 Papaver somniferum HOM05D003538 ORTHO05D004376 3.0e-288 994.6 544 95.8
TAR626G0286 Trochodendron aralioides HOM05D003538 ORTHO05D004376 1.3e-142 510.8 542 55.9
Nn6g35422 Nelumbo nucifera HOM05D003538 ORTHO05D004376 1.1e-125 454.5 549 49.4
Aqoxy7G04069 Aquilegia oxysepala HOM05D003538 ORTHO05D004376 8.9e-123 444.9 548 48.0
MBI03_g13775_MAGBIO Magnolia biondii HOM05D003538 ORTHO05D004376 4.1e-120 436.0 535 50.8
QL02p063126 Quercus lobata HOM05D003538 ORTHO05D004376 4.2e-112 409.5 533 46.0
Cfa003115 Carpinus fangiana HOM05D003538 ORTHO05D004376 1.3e-110 404.4 543 45.5
Hma1.2p1_0798F.1_g219590 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 4.0e-107 392.9 541 46.0
Hma1.2p1_1074F.1_g254274 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 4.0e-107 392.9 541 46.0
Dinv36743 Davidia involucrata HOM05D003538 ORTHO05D004376 5.3e-107 392.5 540 45.2
Prupe.7G213400 Prunus persica HOM05D003538 ORTHO05D004376 7.6e-106 388.7 554 43.0
GSVIVG01015234001 Vitis vinifera HOM05D003538 ORTHO05D004376 5.4e-104 382.5 546 42.7
Atru.chr7.1545 Acer truncatum HOM05D003538 ORTHO05D004376 1.7e-102 377.5 538 44.6
Actinidia29888 Actinidia chinensis HOM05D003538 ORTHO05D004376 2.1e-100 370.5 540 45.6
MD02G1074500 Malus domestica HOM05D003538 ORTHO05D004376 6.2e-100 369.0 535 43.2
QL02p001408 Quercus lobata HOM05D003538 ORTHO05D004376 2.4e-99 367.1 541 43.6
CiPaw.04G152000 Carya illinoinensis HOM05D003538 ORTHO05D004376 5.3e-99 365.9 540 42.2
Haze_25885 Corylus avellana HOM05D003538 ORTHO05D004376 1.7e-97 360.9 442 46.2
Sed0013907 Sechium edule HOM05D003538 ORTHO05D004376 2.2e-97 360.5 542 41.5
Atru.chr7.1041 Acer truncatum HOM05D003538 ORTHO05D004376 8.4e-97 358.6 541 43.4
Duzib168G2161 Durio zibethinus HOM05D003538 ORTHO05D004376 8.4e-97 358.6 558 43.9
CSS0008213 Camellia sinensis var. sinensis HOM05D003538 ORTHO05D004376 1.1e-96 358.2 548 42.3
Ciclev10007935m.g Citrus clementina HOM05D003538 ORTHO05D004376 1.1e-96 358.2 539 40.6
Manes.03G031601 Manihot esculenta HOM05D003538 ORTHO05D004376 5.5e-96 355.9 532 40.6
Rhsim03G0234300 Rhododendron simsii HOM05D003538 ORTHO05D004376 9.3e-96 355.1 535 43.2
TWI34G1305 Tripterygium wilfordii HOM05D003538 ORTHO05D004376 7.9e-95 352.1 537 41.3
COL.COLO4_21041 Corchorus olitorius HOM05D003538 ORTHO05D004376 2.3e-94 350.5 548 42.0
PGSC0003DMG400008432 Solanum tuberosum HOM05D003538 ORTHO05D004376 3.3e-93 346.7 539 41.0
Actinidia01196 Actinidia chinensis HOM05D003538 ORTHO05D004376 4.3e-93 346.3 529 43.7
Eucgr.C03664 Eucalyptus grandis HOM05D003538 ORTHO05D004376 4.3e-93 346.3 457 41.6
ClCG03G015790 Citrullus lanatus HOM05D003538 ORTHO05D004376 2.8e-92 343.6 535 40.4
CANSAT25G2654 Cannabis sativa HOM05D003538 ORTHO05D004376 6.2e-92 342.4 537 42.5
Actinidia30305 Actinidia chinensis HOM05D003538 ORTHO05D004376 1.4e-91 341.3 527 43.6
Thecc.09G092900 Theobroma cacao HOM05D003538 ORTHO05D004376 1.8e-91 340.9 535 40.4
Sopen07g015920 Solanum pennellii HOM05D003538 ORTHO05D004376 3.1e-91 340.1 546 39.9
Gorai.009G045900 Gossypium raimondii HOM05D003538 ORTHO05D004376 9.0e-91 338.6 551 42.5
Lj7A672T62 Lonicera japonica HOM05D003538 ORTHO05D004376 2.6e-90 337.0 494 43.1
CSS0001901 Camellia sinensis var. sinensis HOM05D003538 ORTHO05D004376 7.6e-90 335.5 526 42.0
TWI32G0386 Tripterygium wilfordii HOM05D003538 ORTHO05D004376 7.6e-90 335.5 508 41.9
Glyma.07G128300 Glycine max HOM05D003538 ORTHO05D004376 1.0e-89 335.1 538 41.1
Glyma.01G003600 Glycine max HOM05D003538 ORTHO05D004376 1.3e-89 334.7 529 40.5
Ciclev10007991m.g Citrus clementina HOM05D003538 ORTHO05D004376 2.2e-89 334.0 535 42.1
Gohir.A05G043100 Gossypium hirsutum HOM05D003538 ORTHO05D004376 3.8e-89 333.2 550 41.8
HanXRQChr02g0044571 Helianthus annuus HOM05D003538 ORTHO05D004376 8.4e-89 332.0 551 40.3
VMungo0464G1250 Vigna mungo HOM05D003538 ORTHO05D004376 3.2e-88 330.1 529 39.1
Medtr6g091790 Medicago truncatula HOM05D003538 ORTHO05D004376 4.2e-88 329.7 536 40.7
Potri.006G230900 Populus trichocarpa HOM05D003538 ORTHO05D004376 1.2e-87 328.2 527 43.6
MELO3C015449.2 Cucumis melo HOM05D003538 ORTHO05D004376 6.0e-87 325.9 451 42.6
RcHm_v2.0_Chr2g0092961 Rosa chinensis HOM05D003538 ORTHO05D004376 7.9e-87 325.5 498 42.2
Duzib168G1022 Durio zibethinus HOM05D003538 ORTHO05D004376 1.3e-86 324.7 493 42.2
HPP92_009156 Vanilla planifolia HOM05D003538 ORTHO05D004376 1.8e-86 324.3 538 40.0
Manes.03G034901 Manihot esculenta HOM05D003538 ORTHO05D004376 2.3e-86 323.9 540 38.0
SalBow1G0256 Salvia bowleyana HOM05D003538 ORTHO05D004376 3.0e-86 323.6 534 40.1
Gohir.D07G010500 Gossypium hirsutum HOM05D003538 ORTHO05D004376 5.1e-86 322.8 540 40.4
Lsat_1_v5_gn_8_87540 Lactuca sativa HOM05D003538 ORTHO05D004376 5.1e-86 322.8 510 38.8
Phvul.004G172000 Phaseolus vulgaris HOM05D003538 ORTHO05D004376 5.1e-86 322.8 530 39.8
Rhsim11G0045200 Rhododendron simsii HOM05D003538 ORTHO05D004376 8.7e-86 322.0 518 41.7
Cc06_g11090 Coffea canephora HOM05D003538 ORTHO05D004376 4.3e-85 319.7 537 38.7
arahy.Tifrunner.gnm1.ann1.60DKDN Arachis hypogaea HOM05D003538 ORTHO05D004376 1.3e-84 318.2 532 37.8
arahy.Tifrunner.gnm1.ann1.X6QCD5 Arachis hypogaea HOM05D003538 ORTHO05D004376 1.6e-84 317.8 532 38.0
CsaV3_1G040220 Cucumis sativus L. HOM05D003538 ORTHO05D004376 2.8e-84 317.0 532 38.9
Gorai.001G010900 Gossypium raimondii HOM05D003538 ORTHO05D004376 2.8e-84 317.0 539 39.7
Hma1.2p1_0482F.1_g162640 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 2.8e-84 317.0 528 41.3
Lj5g0027111 Lotus japonicus HOM05D003538 ORTHO05D004376 1.4e-83 314.7 511 40.3
CANSAT56G3152 Cannabis sativa HOM05D003538 ORTHO05D004376 1.8e-83 314.3 553 39.2
Lj2g0016122 Lotus japonicus HOM05D003538 ORTHO05D004376 2.4e-83 313.9 530 38.5
Lj7C279G1 Lonicera japonica HOM05D003538 ORTHO05D004376 1.2e-82 311.6 495 39.8
CDE02G0844 Ceratophyllum demersum HOM05D003538 ORTHO05D004376 3.4e-82 310.1 480 43.1
Eucgr.C03022 Eucalyptus grandis HOM05D003538 ORTHO05D004376 4.5e-82 309.7 535 39.3
FvH4_1g07060 Fragaria vesca HOM05D003538 ORTHO05D004376 2.9e-81 307.0 472 40.0
PGR044G1201 Punica granatum HOM05D003538 ORTHO05D004376 5.0e-81 306.2 500 39.6
CsaV3_UNG062480 Cucumis sativus L. HOM05D003538 ORTHO05D004376 6.5e-81 305.8 558 37.3
Sc23g0005570 Simmondsia chinensis HOM05D003538 ORTHO05D004376 6.5e-81 305.8 402 44.5
CiPaw.16G029300 Carya illinoinensis HOM05D003538 ORTHO05D004376 8.4e-81 305.4 526 39.9
FAN26G3060 Fragaria x ananassa HOM05D003538 ORTHO05D004376 1.1e-80 305.1 491 38.9
Thecc.09G052400 Theobroma cacao HOM05D003538 ORTHO05D004376 2.5e-80 303.9 403 46.2
MSTRG.26404 Avicennia marina HOM05D003538 ORTHO05D004376 4.2e-80 303.1 535 36.8
FAN19G1852 Fragaria x ananassa HOM05D003538 ORTHO05D004376 3.5e-79 300.1 472 39.6
Phvul.001G034000 Phaseolus vulgaris HOM05D003538 ORTHO05D004376 1.0e-78 298.5 486 39.9
VMungo0647G0716 Vigna mungo HOM05D003538 ORTHO05D004376 1.3e-78 298.1 518 39.0
Glyma.17G230200 Glycine max HOM05D003538 ORTHO05D004376 2.3e-78 297.4 507 39.8
Lalb_Chr24g0393871 Lupinus albus HOM05D003538 ORTHO05D004376 2.3e-78 297.4 531 37.7
Gohir.D05G044800 Gossypium hirsutum HOM05D003538 ORTHO05D004376 1.1e-77 295.0 409 46.0
AUR62009165 Chenopodium quinoa HOM05D003538 ORTHO05D004376 3.3e-77 293.5 523 39.0
Lalb_Chr22g0356041 Lupinus albus HOM05D003538 ORTHO05D004376 4.3e-77 293.1 494 38.7
Hund03347 Selenicereus undatus HOM05D003538 ORTHO05D004376 2.8e-76 290.4 519 38.9
AUR62022058 Chenopodium quinoa HOM05D003538 ORTHO05D004376 3.7e-76 290.0 523 39.0
AUR62043933 Chenopodium quinoa HOM05D003538 ORTHO05D004376 3.7e-76 290.0 523 39.0
Sabra06G0179100 Salix brachista HOM05D003538 ORTHO05D004376 4.8e-76 289.7 559 40.3
FAN23G1479 Fragaria x ananassa HOM05D003538 ORTHO05D004376 5.3e-75 286.2 480 37.7
Glyma.14G093500 Glycine max HOM05D003538 ORTHO05D004376 1.2e-74 285.0 505 37.8
TPR.G13110 Trifolium pratense HOM05D003538 ORTHO05D004376 1.3e-73 281.6 521 37.2
Gohir.A07G010200 Gossypium hirsutum HOM05D003538 ORTHO05D004376 6.5e-73 279.3 539 37.8
MELO3C016862.2 Cucumis melo HOM05D003538 ORTHO05D004376 8.5e-73 278.9 509 38.9
CsaV3_4G035550 Cucumis sativus L. HOM05D003538 ORTHO05D004376 1.1e-72 278.5 512 40.2
Sed0023083 Sechium edule HOM05D003538 ORTHO05D004376 2.5e-72 277.3 506 39.7
arahy.Tifrunner.gnm1.ann1.IE7M3R Arachis hypogaea HOM05D003538 ORTHO05D004376 7.2e-72 275.8 513 35.5
Cc08_g10420 Coffea canephora HOM05D003538 ORTHO05D004376 7.2e-72 275.8 495 40.0
Medtr1g016740 Medicago truncatula HOM05D003538 ORTHO05D004376 2.1e-71 274.2 541 35.1
Aa31LG8G16630 Aethionema arabicum HOM05D003538 ORTHO05D004376 7.9e-71 272.3 538 35.5
Medtr6g091900 Medicago truncatula HOM05D003538 ORTHO05D004376 1.4e-70 271.6 527 36.8
Zm00001eb161340 Zea mays HOM05D003538 ORTHO05D004376 1.4e-70 271.6 540 36.9
vmacro06276 Vaccinium macrocarpon HOM05D003538 ORTHO05D004376 3.9e-70 270.0 543 37.2
ClCG05G017780 Citrullus lanatus HOM05D003538 ORTHO05D004376 1.1e-69 268.5 525 38.5
THA.LOC104814609 Tarenaya hassleriana HOM05D003538 ORTHO05D004376 1.5e-69 268.1 525 37.1
Manes.03G047000 Manihot esculenta HOM05D003538 ORTHO05D004376 2.0e-69 267.7 388 42.3
Nitab4.5_0001584g0040 Nicotiana tabacum HOM05D003538 ORTHO05D004376 2.5e-69 267.3 534 36.5
EL10Ac2g03914 Beta vulgaris HOM05D003538 ORTHO05D004376 7.4e-69 265.8 400 42.5
Peaxi162Scf00136g00059 Petunia axillaris HOM05D003538 ORTHO05D004376 7.4e-69 265.8 520 36.9
Ah.11g044700 Amaranthus hybridus HOM05D003538 ORTHO05D004376 1.8e-67 261.2 527 35.1
Ca_13176_v3 Cicer arietinum L. HOM05D003538 ORTHO05D004376 3.1e-67 260.4 554 34.7
Nitab4.5_0001179g0130 Nicotiana tabacum HOM05D003538 ORTHO05D004376 1.5e-66 258.1 530 36.0
Solyc08g065440.4 Solanum lycopersicum HOM05D003538 ORTHO05D004376 5.9e-66 256.1 516 37.0
ECA236G1610 Erigeron canadensis HOM05D003538 ORTHO05D004376 2.9e-65 253.8 412 40.5
MSTRG.11666 Avicennia marina HOM05D003538 ORTHO05D004376 5.0e-65 253.1 419 40.1
Sopen08g019050 Solanum pennellii HOM05D003538 ORTHO05D004376 1.9e-64 251.1 516 36.8
Zm00001eb357710 Zea mays HOM05D003538 ORTHO05D004376 7.9e-63 245.7 541 34.9
Sed0020375 Sechium edule HOM05D003538 ORTHO05D004376 1.4e-62 245.0 433 40.2
vmacro00153 Vaccinium macrocarpon HOM05D003538 ORTHO05D004376 3.0e-62 243.8 478 35.1
Haze_18202 Corylus avellana HOM05D003538 ORTHO05D004376 1.5e-61 241.5 579 33.7
Migut.A00144 Erythranthe guttata HOM05D003538 ORTHO05D004376 5.7e-61 239.6 532 35.7
arahy.Tifrunner.gnm1.ann1.QX44E6 Arachis hypogaea HOM05D003538 ORTHO05D004376 2.2e-60 237.7 581 31.7
Dinv27976 Davidia involucrata HOM05D003538 ORTHO05D004376 3.5e-58 230.3 279 50.2
PGSC0003DMG400002203 Solanum tuberosum HOM05D003538 ORTHO05D004376 2.2e-57 227.6 438 36.5
CARHR201410 Cardamine hirsuta HOM05D003538 ORTHO05D004376 8.5e-57 225.7 514 34.0
unitig_699.g19305 Utricularia gibba HOM05D003538 ORTHO05D004376 8.5e-57 225.7 527 31.5
Aa31LG3G15420 Aethionema arabicum HOM05D003538 ORTHO05D004376 9.4e-56 222.2 499 33.1
Lsat_1_v5_gn_3_24260 Lactuca sativa HOM05D003538 ORTHO05D004376 2.1e-55 221.1 438 37.0
Thhalv10013348m.g Eutrema salsugineum HOM05D003538 ORTHO05D004376 5.2e-54 216.5 502 33.3
HanXRQChr06g0173831 Helianthus annuus HOM05D003538 ORTHO05D004376 8.8e-54 215.7 436 35.6
Cpa.g.sc7.247 Carica papaya HOM05D003538 ORTHO05D004376 1.1e-53 215.3 282 47.2
Carub.0006s1031 Capsella rubella HOM05D003538 ORTHO05D004376 2.0e-53 214.5 523 32.1
Manes.03G031262 Manihot esculenta HOM05D003538 ORTHO05D004376 1.4e-51 208.4 352 38.9
Manes.03G030833 Manihot esculenta HOM05D003538 ORTHO05D004376 4.1e-51 206.8 290 44.1
Sc18g0001860 Simmondsia chinensis HOM05D003538 ORTHO05D004376 4.1e-51 206.8 266 46.6
AT5G11780 Arabidopsis thaliana HOM05D003538 ORTHO05D004376 9.1e-51 205.7 525 32.0
AL6G22530 Arabidopsis lyrata HOM05D003538 ORTHO05D004376 3.5e-50 203.8 524 31.5
Manes.03G031366 Manihot esculenta HOM05D003538 ORTHO05D004376 4.5e-50 203.4 296 43.6
Os01g0600300 Oryza sativa ssp. japonica HOM05D003538 ORTHO05D004376 9.4e-48 195.7 302 40.7
BcaC04g19195 Brassica carinata HOM05D003538 ORTHO05D004376 2.1e-47 194.5 442 34.4
DCAR_011998 Daucus carota HOM05D003538 ORTHO05D004376 2.7e-47 194.1 290 43.1
SalBow4G1879 Salvia bowleyana HOM05D003538 ORTHO05D004376 4.7e-47 193.4 533 29.1
A10p25960 Brassica napus HOM05D003538 ORTHO05D004376 1.4e-46 191.8 490 33.1
BraA10t44658Z Brassica rapa HOM05D003538 ORTHO05D004376 1.4e-46 191.8 490 33.1
Solyc07g032260.3 Solanum lycopersicum HOM05D003538 ORTHO05D004376 4.0e-46 190.3 267 42.3
Hma1.2p1_0798F.1_g219600 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 1.5e-45 188.3 258 45.0
GSVIVG01035358001 Vitis vinifera HOM05D003538 ORTHO05D004376 2.0e-45 188.0 266 42.9
C09p65040 Brassica napus HOM05D003538 ORTHO05D004376 7.5e-45 186.0 444 32.9
BolC9t59332H Brassica oleracea HOM05D003538 ORTHO05D004376 1.3e-44 185.3 513 31.4
FAN26G2436 Fragaria x ananassa HOM05D003538 ORTHO05D004376 2.9e-41 174.1 247 41.7
Medtr6g092160 Medicago truncatula HOM05D003538 ORTHO05D004376 2.7e-39 167.5 300 36.7
Oeu039611.1 Olea europaea HOM05D003538 ORTHO05D004376 1.2e-37 162.2 246 40.7
ATR0789G162 Amborella trichopoda HOM05D003538 ORTHO05D004376 1.1e-35 155.6 283 36.4
Sopen07g015930 Solanum pennellii HOM05D003538 ORTHO05D004376 2.0e-34 151.4 256 38.3
SEGI_33762 Sequoiadendron giganteum HOM05D003538 ORTHO05D004376 3.8e-33 147.1 481 29.1
Psat6g019320 Pisum sativum HOM05D003538 ORTHO05D004376 9.5e-32 142.5 391 29.2
ATR0789G133 Amborella trichopoda HOM05D003538 ORTHO05D004376 1.0e-30 139.0 255 39.2
ECA246G1935 Erigeron canadensis HOM05D003538 ORTHO05D004376 1.0e-30 139.0 257 37.0
Cpa.g.sc7.246 Carica papaya HOM05D003538 ORTHO05D004376 1.5e-29 135.2 250 36.0
SalBow4G0582 Salvia bowleyana HOM05D003538 ORTHO05D004376 1.5e-29 135.2 262 36.3
SGA_v2.0_scaffold734G53534 Striga asiatica HOM05D003538 ORTHO05D004376 5.4e-27 126.7 266 36.1
Oeu018651.1 Olea europaea HOM05D003538 ORTHO05D004376 6.8e-22 109.8 268 32.5
Medtr6g092190 Medicago truncatula HOM05D003538 ORTHO05D004376 4.4e-21 107.1 258 32.9
RcHm_v2.0_Chr4g0406051 Rosa chinensis HOM05D003538 ORTHO05D004376 1.6e-18 98.6 168 38.1
Eucgr.L03304 Eucalyptus grandis HOM05D003538 ORTHO05D004376 2.0e-18 98.2 237 33.3
DCAR_004434 Daucus carota HOM05D003538 ORTHO05D004376 1.0e-17 95.9 169 36.7
RcHm_v2.0_Chr4g0425381 Rosa chinensis HOM05D003538 ORTHO05D004376 5.0e-17 93.6 168 37.5
Thecc.06G128700 Theobroma cacao HOM05D003538 ORTHO05D004376 1.1e-16 92.4 141 44.7
SEGI_10797 Sequoiadendron giganteum HOM05D003538 ORTHO05D004376 5.6e-16 90.1 280 28.6
Oeu021470.1 Olea europaea HOM05D003538 ORTHO05D004376 1.8e-14 85.1 117 39.3
Pp3c10_12370 Physcomitrium patens HOM05D003538 ORTHO05D004376 2.6e-13 81.3 523 24.5
AagrBONN_evm.TU.Sc2ySwM_344.1097 Anthoceros agrestis HOM05D003538 ORTHO05D004376 4.4e-13 80.5 481 24.9
SGA_v2.0_scaffold187G40255 Striga asiatica HOM05D003538 ORTHO05D004376 7.5e-13 79.7 132 35.6
Lj7A278T10 Lonicera japonica HOM05D003538 ORTHO05D004376 2.4e-11 74.7 140 31.4
Mapoly0075s0033 Marchantia polymorpha HOM05D003538 ORTHO05D004376 1.6e-10 72.0 529 22.7
Sc18g0001870 Simmondsia chinensis HOM05D003538 ORTHO05D004376 1.3e-09 68.9 197 29.9
BcaC06g31881 Brassica carinata HOM05D000161 ORTHO05D000111 1.2e-07 62.4 121 33.9
TPR.G21889 Trifolium pratense HOM05D003538 ORTHO05D004376 8.9e-06 56.2 121 37.2


User provided reference genes

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