Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6272 Papaver somniferum HOM05D004968 ORTHO05D005922 3.2e-153 545.0 277 100.0
PSO210G6102 Papaver somniferum HOM05D004968 ORTHO05D005922 9.1e-140 500.4 277 92.8
Aqoxy2G00971 Aquilegia oxysepala HOM05D004968 ORTHO05D005922 3.4e-70 269.2 248 59.3
Aqoxy214s001 Aquilegia oxysepala HOM05D004968 ORTHO05D005922 1.0e-69 267.7 245 59.6
Aqoxy2G00255 Aquilegia oxysepala HOM05D004968 ORTHO05D005922 2.5e-68 263.1 247 58.7
COL.COLO4_32438 Corchorus olitorius HOM05D004968 ORTHO05D005922 2.5e-65 253.1 244 54.5
Nn5g29559 Nelumbo nucifera HOM05D004968 ORTHO05D005922 4.8e-64 248.8 246 54.9
MD10G1078800 Malus domestica HOM05D004968 ORTHO05D005922 6.3e-64 248.4 241 53.5
TWI31G0993 Tripterygium wilfordii HOM05D004968 ORTHO05D005922 1.8e-63 246.9 244 54.1
FvH4_2g08440 Fragaria vesca HOM05D004968 ORTHO05D005922 3.1e-63 246.1 254 52.0
GSVIVG01031935001 Vitis vinifera HOM05D004968 ORTHO05D005922 4.1e-63 245.7 247 53.0
Gorai.008G018600 Gossypium raimondii HOM05D004968 ORTHO05D005922 5.3e-63 245.4 260 51.9
Gohir.D12G018300 Gossypium hirsutum HOM05D004968 ORTHO05D005922 1.5e-62 243.8 244 53.3
Gohir.A12G017700 Gossypium hirsutum HOM05D004968 ORTHO05D005922 2.0e-62 243.4 244 53.7
TWI79G0651 Tripterygium wilfordii HOM05D004968 ORTHO05D005922 2.6e-62 243.0 241 52.7
CDE08G1236 Ceratophyllum demersum HOM05D004968 ORTHO05D005922 4.5e-62 242.3 248 51.6
RcHm_v2.0_Chr6g0263721 Rosa chinensis HOM05D004968 ORTHO05D005922 7.6e-62 241.5 254 52.0
Prupe.8G100600 Prunus persica HOM05D004968 ORTHO05D005922 1.0e-61 241.1 241 53.1
PGR119G1160 Punica granatum HOM05D004968 ORTHO05D005922 1.3e-61 240.7 244 52.9
Eucgr.F03779 Eucalyptus grandis HOM05D004968 ORTHO05D005922 2.2e-61 240.0 255 51.4
Thecc.02G124000 Theobroma cacao HOM05D004968 ORTHO05D005922 3.8e-61 239.2 247 51.4
QL11p043149 Quercus lobata HOM05D004968 ORTHO05D005922 6.5e-61 238.4 263 50.2
Potri.004G152800 Populus trichocarpa HOM05D004968 ORTHO05D005922 1.1e-60 237.7 244 51.6
Ciclev10028976m.g Citrus clementina HOM05D004968 ORTHO05D005922 1.9e-60 236.9 242 51.7
TWI75G0648 Tripterygium wilfordii HOM05D004968 ORTHO05D005922 1.9e-60 236.9 242 53.3
CANSAT54G1571 Cannabis sativa HOM05D004968 ORTHO05D005922 4.2e-60 235.7 242 51.2
Manes.17G099900 Manihot esculenta HOM05D004968 ORTHO05D005922 5.5e-60 235.3 244 49.6
QL11p042637 Quercus lobata HOM05D004968 ORTHO05D005922 5.5e-60 235.3 263 49.4
Actinidia17822 Actinidia chinensis HOM05D004968 ORTHO05D005922 7.2e-60 235.0 244 51.6
Rhsim05G0075100 Rhododendron simsii HOM05D004968 ORTHO05D005922 9.3e-60 234.6 244 50.8
MBI15_g22768_MAGBIO Magnolia biondii HOM05D004968 ORTHO05D005922 4.6e-59 232.3 255 51.8
Manes.15G164800 Manihot esculenta HOM05D004968 ORTHO05D005922 1.3e-58 230.7 260 46.5
THA.LOC104823527 Tarenaya hassleriana HOM05D004968 ORTHO05D005922 1.3e-58 230.7 268 48.1
Dinv23542 Davidia involucrata HOM05D004968 ORTHO05D005922 1.8e-58 230.3 244 51.2
Rhsim11G0174600 Rhododendron simsii HOM05D004968 ORTHO05D005922 1.8e-58 230.3 244 51.6
THA.LOC104818761 Tarenaya hassleriana HOM05D004968 ORTHO05D005922 3.0e-58 229.6 271 47.2
Hund06225 Selenicereus undatus HOM05D004968 ORTHO05D005922 6.7e-58 228.4 268 47.0
Lj5C198G20 Lonicera japonica HOM05D004968 ORTHO05D005922 1.1e-57 227.6 260 47.7
Gohir.D13G047300 Gossypium hirsutum HOM05D004968 ORTHO05D005922 3.3e-57 226.1 244 50.4
AUR62011341 Chenopodium quinoa HOM05D004968 ORTHO05D005922 7.4e-57 224.9 247 51.4
AUR62032493 Chenopodium quinoa HOM05D004968 ORTHO05D005922 7.4e-57 224.9 247 51.0
ClCG09G016910 Citrullus lanatus HOM05D004968 ORTHO05D005922 1.3e-56 224.2 247 45.7
Gohir.A13G048800 Gossypium hirsutum HOM05D004968 ORTHO05D005922 2.8e-56 223.0 245 50.6
Gorai.013G052900 Gossypium raimondii HOM05D004968 ORTHO05D005922 3.7e-56 222.6 245 50.6
MSTRG.17529 Avicennia marina HOM05D004968 ORTHO05D005922 1.8e-55 220.3 246 46.7
AUR62016719 Chenopodium quinoa HOM05D004968 ORTHO05D005922 2.4e-55 219.9 240 50.8
EL10Ac9g21742 Beta vulgaris HOM05D004968 ORTHO05D005922 5.3e-55 218.8 259 47.5
CsaV3_2G036400 Cucumis sativus L. HOM05D004968 ORTHO05D005922 2.6e-54 216.5 266 45.1
Glyma.01G233700 Glycine max HOM05D004968 ORTHO05D005922 4.5e-54 215.7 244 48.8
Sed0008504 Sechium edule HOM05D004968 ORTHO05D005922 5.9e-54 215.3 248 45.2
Ca_24432_v3 Cicer arietinum L. HOM05D004968 ORTHO05D005922 7.7e-54 214.9 244 48.8
DCAR_022106 Daucus carota HOM05D004968 ORTHO05D005922 1.0e-53 214.5 241 49.0
Lsat_1_v5_gn_5_117961 Lactuca sativa HOM05D004968 ORTHO05D005922 1.7e-53 213.8 245 46.1
HanXRQChr10g0307261 Helianthus annuus HOM05D004968 ORTHO05D005922 6.5e-53 211.8 244 45.1
Sc08g0000410 Simmondsia chinensis HOM05D004968 ORTHO05D005922 8.5e-53 211.5 215 51.6
LjContig00222g0024344 Lotus japonicus HOM05D004968 ORTHO05D005922 1.4e-52 210.7 244 48.0
Sp1g10370 Schrenkiella parvula HOM05D004968 ORTHO05D005922 1.4e-52 210.7 243 46.5
MELO3C021891.2 Cucumis melo HOM05D004968 ORTHO05D005922 2.5e-52 209.9 248 45.2
ECA234G4136 Erigeron canadensis HOM05D004968 ORTHO05D005922 2.5e-52 209.9 246 45.1
Migut.B00251 Erythranthe guttata HOM05D004968 ORTHO05D005922 2.5e-52 209.9 243 44.4
MSTRG.16797 Avicennia marina HOM05D004968 ORTHO05D005922 3.2e-52 209.5 237 45.6
PGSC0003DMG400024156 Solanum tuberosum HOM05D004968 ORTHO05D005922 3.2e-52 209.5 244 45.9
CSS0007217 Camellia sinensis var. sinensis HOM05D004968 ORTHO05D005922 5.5e-52 208.8 248 50.4
Lalb_Chr16g0376541 Lupinus albus HOM05D004968 ORTHO05D005922 7.2e-52 208.4 244 46.7
Aa31LG2G8870 Aethionema arabicum HOM05D004968 ORTHO05D005922 9.4e-52 208.0 270 45.6
Thhalv10008545m.g Eutrema salsugineum HOM05D004968 ORTHO05D005922 1.2e-51 207.6 244 46.3
TAR628G0550 Trochodendron aralioides HOM05D004968 ORTHO05D005922 1.2e-51 207.6 222 52.7
TAR628G1407 Trochodendron aralioides HOM05D004968 ORTHO05D005922 1.2e-51 207.6 222 52.7
unitig_60.g25856 Utricularia gibba HOM05D004968 ORTHO05D005922 1.2e-51 207.6 237 44.3
Sopen06g020960 Solanum pennellii HOM05D004968 ORTHO05D005922 1.6e-51 207.2 250 44.8
Ah.01g019530 Amaranthus hybridus HOM05D004968 ORTHO05D005922 2.1e-51 206.8 237 47.3
Psat2g154960 Pisum sativum HOM05D004968 ORTHO05D005922 2.1e-51 206.8 246 46.7
Duzib248G0873 Durio zibethinus HOM05D004968 ORTHO05D005922 2.7e-51 206.5 249 49.0
Lsat_1_v5_gn_9_109460 Lactuca sativa HOM05D004968 ORTHO05D005922 2.7e-51 206.5 252 44.0
SalBow5G1254 Salvia bowleyana HOM05D004968 ORTHO05D005922 2.7e-51 206.5 247 44.9
Cc02_g17750 Coffea canephora HOM05D004968 ORTHO05D005922 3.6e-51 206.1 244 45.1
Nitab4.5_0000618g0170 Nicotiana tabacum HOM05D004968 ORTHO05D005922 3.6e-51 206.1 244 45.5
CiPaw.05G062800 Carya illinoinensis HOM05D004968 ORTHO05D005922 4.6e-51 205.7 197 54.8
BcaB03g13234 Brassica carinata HOM05D004968 ORTHO05D005922 6.1e-51 205.3 244 45.1
Psat2g189320 Pisum sativum HOM05D004968 ORTHO05D005922 6.1e-51 205.3 244 46.3
FAN24G2241 Fragaria x ananassa HOM05D004968 ORTHO05D005922 7.9e-51 204.9 226 50.4
BcaC05g25044 Brassica carinata HOM05D004968 ORTHO05D005922 1.0e-50 204.5 242 45.0
DCAR_028995 Daucus carota HOM05D004968 ORTHO05D005922 1.0e-50 204.5 245 46.5
SalBow6G2079 Salvia bowleyana HOM05D004968 ORTHO05D005922 1.0e-50 204.5 249 44.6
Zm00001eb008090 Zea mays HOM05D004968 ORTHO05D005922 1.0e-50 204.5 248 46.8
Medtr5g007260 Medicago truncatula HOM05D004968 ORTHO05D005922 1.4e-50 204.1 244 45.1
TPR.G17161 Trifolium pratense HOM05D004968 ORTHO05D005922 1.4e-50 204.1 245 46.9
ATR0733G063 Amborella trichopoda HOM05D004968 ORTHO05D005922 3.9e-50 202.6 264 43.6
Oeu020768.3 Olea europaea HOM05D004968 ORTHO05D005922 3.9e-50 202.6 235 46.0
Carub.0001s1141 Capsella rubella HOM05D004968 ORTHO05D005922 6.7e-50 201.8 244 45.1
ECA240G2790 Erigeron canadensis HOM05D004968 ORTHO05D005922 6.7e-50 201.8 259 41.7
AL1G22930 Arabidopsis lyrata HOM05D004968 ORTHO05D005922 8.8e-50 201.4 243 46.1
Haze_02366 Corylus avellana HOM05D004968 ORTHO05D005922 2.6e-49 199.9 233 49.8
AT1G11755 Arabidopsis thaliana HOM05D004968 ORTHO05D005922 4.3e-49 199.1 243 45.3
CARHR012070 Cardamine hirsuta HOM05D004968 ORTHO05D005922 4.3e-49 199.1 245 44.1
Lj5g0027841 Lotus japonicus HOM05D004968 ORTHO05D005922 4.3e-49 199.1 244 45.9
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 7.4e-49 198.4 239 45.6
BcaB03g13233 Brassica carinata HOM05D004968 ORTHO05D005922 1.3e-48 197.6 243 45.3
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 1.7e-48 197.2 274 42.7
A06p08310 Brassica napus HOM05D004968 ORTHO05D005922 2.2e-48 196.8 240 44.6
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 2.2e-48 196.8 274 42.7
Phvul.002G041200 Phaseolus vulgaris HOM05D004968 ORTHO05D005922 2.2e-48 196.8 244 45.1
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 3.7e-48 196.1 239 45.2
TPR.G37890 Trifolium pratense HOM05D004968 ORTHO05D005922 3.7e-48 196.1 245 44.5
Nitab4.5_0000959g0010 Nicotiana tabacum HOM05D004968 ORTHO05D005922 6.3e-48 195.3 240 44.6
BraA06t24029Z Brassica rapa HOM05D001191 ORTHO05D000979 1.1e-47 194.5 240 44.6
HPP92_024488 Vanilla planifolia HOM05D004968 ORTHO05D005922 1.4e-47 194.1 244 45.1
Glyma.11G009100 Glycine max HOM05D004968 ORTHO05D005922 2.4e-47 193.4 256 45.3
Os03g0197000 Oryza sativa ssp. japonica HOM05D004968 ORTHO05D005922 1.2e-46 191.0 255 43.1
C05p09870 Brassica napus HOM05D001191 ORTHO05D000979 1.5e-46 190.7 240 42.9
BolC5t29726H Brassica oleracea HOM05D001191 ORTHO05D000979 1.5e-46 190.7 240 42.9
CAN.G62.20 Capsicum annuum HOM05D004968 ORTHO05D005922 1.5e-46 190.7 242 42.6
Eucgr.L02365 Eucalyptus grandis HOM05D004968 ORTHO05D005922 3.4e-46 189.5 224 47.8
TAR376G0049 Trochodendron aralioides HOM05D004968 ORTHO05D005922 3.4e-46 189.5 216 52.8
vmacro17504 Vaccinium macrocarpon HOM05D004968 ORTHO05D005922 5.9e-46 188.7 221 47.5
vmacro17503 Vaccinium macrocarpon HOM05D004968 ORTHO05D005922 3.8e-45 186.0 218 47.2
Aa31LG1G3000 Aethionema arabicum HOM05D004968 ORTHO05D005922 1.9e-44 183.7 235 44.7
Cpa.g.sc62.129 Carica papaya HOM05D004968 ORTHO05D005922 3.6e-43 179.5 190 52.1
Medtr5g007330 Medicago truncatula HOM05D004968 ORTHO05D005922 3.6e-43 179.5 244 41.4
HPP92_014277 Vanilla planifolia HOM05D004968 ORTHO05D005922 2.3e-42 176.8 202 47.5
Lalb_Chr05g0211211 Lupinus albus HOM05D004968 ORTHO05D005922 3.0e-42 176.4 244 44.3
arahy.Tifrunner.gnm1.ann1.GI2C3C Arachis hypogaea HOM05D004968 ORTHO05D005922 2.2e-40 170.2 230 43.5
Peaxi162Scf00190g01218 Petunia axillaris HOM05D004968 ORTHO05D005922 1.1e-39 167.9 220 42.7
Os02g0197700 Oryza sativa ssp. japonica HOM05D004968 ORTHO05D005922 1.8e-39 167.2 251 41.4
Atru.chr5.2990 Acer truncatum HOM05D004968 ORTHO05D005922 2.4e-39 166.8 172 54.1
Solyc06g060810.3 Solanum lycopersicum HOM05D004968 ORTHO05D005922 1.2e-38 164.5 244 40.2
SHI05416 Sapria himalayana HOM05D004968 ORTHO05D005922 1.7e-37 160.6 218 42.7
vmacro02126 Vaccinium macrocarpon HOM05D004968 ORTHO05D005922 1.2e-35 154.5 214 44.4
arahy.Tifrunner.gnm1.ann1.UWQD3U Arachis hypogaea HOM05D004968 ORTHO05D005922 2.1e-35 153.7 216 42.6
SEGI_04576 Sequoiadendron giganteum HOM05D004968 ORTHO05D005922 1.4e-34 151.0 262 34.7
Hma1.2p1_1375F.1_g278980 Hydrangea macrophylla HOM05D004968 ORTHO05D005922 4.0e-34 149.4 190 44.7
Hma1.2p1_3179F.1_g333693 Hydrangea macrophylla HOM05D004968 ORTHO05D005922 4.0e-34 149.4 190 44.7
VMungo1309G1500 Vigna mungo HOM05D004968 ORTHO05D005922 8.8e-34 148.3 233 41.2
SGA_v2.0_scaffold68G22950 Striga asiatica HOM05D004968 ORTHO05D005922 6.3e-32 142.1 272 33.5
HanXRQChr14g0443031 Helianthus annuus HOM05D004968 ORTHO05D005922 5.3e-31 139.0 242 36.4
VMungo1309G3063 Vigna mungo HOM05D004968 ORTHO05D005922 9.4e-28 128.3 177 44.1
Prupe.8G100800 Prunus persica HOM05D004968 ORTHO05D005922 1.2e-25 121.3 149 46.3
DCAR_022108 Daucus carota HOM05D004968 ORTHO05D005922 4.1e-23 112.8 92 54.3
SGA_v2.0_scaffold58G20551 Striga asiatica HOM05D004968 ORTHO05D005922 7.7e-22 108.6 174 36.8
FAN20G2519 Fragaria x ananassa HOM05D004968 ORTHO05D005922 8.5e-21 105.1 87 58.6
AagrBONN_evm.TU.Sc2ySwM_117.3108 Anthoceros agrestis HOM05D004968 ORTHO05D005922 2.5e-20 103.6 196 34.7
Actinidia26757 Actinidia chinensis HOM05D004968 ORTHO05D005922 4.0e-18 96.3 117 44.4
Hma1.2p1_1375F.1_g278990 Hydrangea macrophylla HOM05D004968 ORTHO05D005922 3.4e-17 93.2 92 54.3
SMO351G0289 Selaginella moellendorffii HOM05D004968 ORTHO05D005922 1.4e-15 87.8 257 26.8
Cc02_g20810 Coffea canephora HOM05D004968 ORTHO05D005922 5.4e-15 85.9 90 50.0
Mapoly0014s0198 Marchantia polymorpha HOM05D004968 ORTHO05D005922 1.2e-14 84.7 113 37.2
TPR.G17189 Trifolium pratense HOM05D004968 ORTHO05D005922 3.5e-14 83.2 154 36.4
Lsat_1_v5_gn_2_61580 Lactuca sativa HOM05D004968 ORTHO05D005922 2.3e-13 80.5 126 32.5
Lsat_1_v5_gn_0_28960 Lactuca sativa HOM05D004968 ORTHO05D005922 3.8e-13 79.7 84 44.0
Dinv42083 Davidia involucrata HOM05D004968 ORTHO05D005922 6.8e-10 68.9 145 33.8


User provided reference genes

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