Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6259 Papaver somniferum HOM05D002969 ORTHO05D003308 0.0e+00 1882.1 969 100.0
PSO447G0254 Papaver somniferum HOM05D002969 ORTHO05D003308 0.0e+00 1772.3 922 98.8
TAR626G1632 Trochodendron aralioides HOM05D002969 ORTHO05D003308 0.0e+00 1147.1 936 66.0
Nn7g36584 Nelumbo nucifera HOM05D002969 ORTHO05D003308 0.0e+00 1114.0 936 63.5
Aqoxy7G01394 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 0.0e+00 1092.0 927 62.5
Dinv30672 Davidia involucrata HOM05D002969 ORTHO05D003308 1.6e-303 1046.2 939 60.7
Dinv34332 Davidia involucrata HOM05D002969 ORTHO05D003308 1.6e-303 1046.2 939 60.7
Dinv04036 Davidia involucrata HOM05D002969 ORTHO05D003308 5.4e-296 1021.1 931 59.2
CSS0043728 Camellia sinensis var. sinensis HOM05D002969 ORTHO05D003308 2.0e-290 1002.7 926 58.7
Actinidia32183 Actinidia chinensis HOM05D002969 ORTHO05D003308 6.0e-287 991.1 929 58.0
GSVIVG01016771001 Vitis vinifera HOM05D002969 ORTHO05D003308 4.1e-272 941.8 929 56.4
Cfa003537 Carpinus fangiana HOM05D002969 ORTHO05D003308 6.0e-271 937.9 932 55.7
Rhsim08G0238100 Rhododendron simsii HOM05D002969 ORTHO05D003308 6.0e-271 937.9 942 55.6
Haze_16025 Corylus avellana HOM05D002969 ORTHO05D003308 5.8e-266 921.4 930 54.7
Oeu007563.1 Olea europaea HOM05D002969 ORTHO05D003308 1.3e-262 910.2 927 54.7
Lj7C292T8 Lonicera japonica HOM05D002969 ORTHO05D003308 3.6e-260 902.1 938 54.1
QL05p007828 Quercus lobata HOM05D002969 ORTHO05D003308 8.1e-260 901.0 932 53.3
CSS0047313 Camellia sinensis var. sinensis HOM05D002969 ORTHO05D003308 2.9e-257 892.5 831 58.0
Lsat_1_v5_gn_5_75740 Lactuca sativa HOM05D002969 ORTHO05D003308 4.6e-247 858.6 939 51.3
Ciclev10024687m.g Citrus clementina HOM05D002969 ORTHO05D003308 2.0e-242 843.2 933 51.3
PSO017G0852 Papaver somniferum HOM05D002969 ORTHO05D003308 3.4e-242 842.4 541 82.4
MSTRG.10956 Avicennia marina HOM05D002969 ORTHO05D003308 2.9e-241 839.3 928 50.3
PGR102G0955 Punica granatum HOM05D002969 ORTHO05D003308 1.6e-239 833.6 937 50.6
ClCG05G007230 Citrullus lanatus HOM05D002969 ORTHO05D003308 4.6e-239 832.0 960 49.8
Cc02_g14940 Coffea canephora HOM05D002969 ORTHO05D003308 5.1e-238 828.6 936 48.5
Eucgr.J02821 Eucalyptus grandis HOM05D002969 ORTHO05D003308 2.2e-236 823.2 944 49.9
Gorai.012G011500 Gossypium raimondii HOM05D002969 ORTHO05D003308 1.8e-235 820.1 934 50.7
MELO3C006797.2 Cucumis melo HOM05D002969 ORTHO05D003308 1.5e-234 817.0 941 49.0
COL.COLO4_30764 Corchorus olitorius HOM05D002969 ORTHO05D003308 1.3e-233 813.9 988 48.5
DCAR_022697 Daucus carota HOM05D002969 ORTHO05D003308 3.8e-233 812.4 932 49.0
CsaV3_3G015990 Cucumis sativus L. HOM05D002969 ORTHO05D003308 1.2e-231 807.4 940 48.5
Atru.chr1.3951 Acer truncatum HOM05D002969 ORTHO05D003308 1.6e-231 807.0 993 48.9
Gohir.A05G405950 Gossypium hirsutum HOM05D002969 ORTHO05D003308 2.7e-231 806.2 934 50.2
MD09G1184300 Malus domestica HOM05D002969 ORTHO05D003308 1.0e-230 804.3 942 48.1
SEGI_24599 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 6.7e-230 801.6 821 53.8
DCAR_016128 Daucus carota HOM05D002969 ORTHO05D003308 1.1e-229 800.8 934 49.5
RcHm_v2.0_Chr2g0145161 Rosa chinensis HOM05D002969 ORTHO05D003308 3.1e-227 792.7 947 49.2
ECA247G3059 Erigeron canadensis HOM05D002969 ORTHO05D003308 4.1e-227 792.3 934 48.5
TWI31G0668 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 2.0e-226 790.0 932 48.8
HanXRQChr10g0301861 Helianthus annuus HOM05D002969 ORTHO05D003308 2.6e-226 789.6 942 49.0
Sed0027017 Sechium edule HOM05D002969 ORTHO05D003308 6.5e-225 785.0 956 48.1
Thecc.06G119100 Theobroma cacao HOM05D002969 ORTHO05D003308 2.7e-223 779.6 804 53.5
ATR0618G078 Amborella trichopoda HOM05D002969 ORTHO05D003308 4.7e-223 778.9 952 48.9
ECA240G4395 Erigeron canadensis HOM05D002969 ORTHO05D003308 5.1e-222 775.4 934 47.6
Migut.I01069 Erythranthe guttata HOM05D002969 ORTHO05D003308 1.5e-221 773.9 982 45.9
Sc18g0005650 Simmondsia chinensis HOM05D002969 ORTHO05D003308 7.4e-221 771.5 949 46.7
FvH4_6g34630 Fragaria vesca HOM05D002969 ORTHO05D003308 1.7e-220 770.4 940 47.8
Duzib235G1299 Durio zibethinus HOM05D002969 ORTHO05D003308 2.2e-220 770.0 801 52.8
FAN09G2022 Fragaria x ananassa HOM05D002969 ORTHO05D003308 3.7e-220 769.2 940 47.8
FAN14G5519 Fragaria x ananassa HOM05D002969 ORTHO05D003308 4.8e-220 768.8 940 47.7
FAN05G1938 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.4e-219 767.3 944 47.7
Lj5C38T4 Lonicera japonica HOM05D002969 ORTHO05D003308 1.5e-218 763.8 934 48.4
SGA_v2.0_scaffold71G23857 Striga asiatica HOM05D002969 ORTHO05D003308 1.0e-217 761.1 999 44.9
Lsat_1_v5_gn_1_38040 Lactuca sativa HOM05D002969 ORTHO05D003308 1.2e-215 754.2 986 45.5
Nitab4.5_0000794g0160 Nicotiana tabacum HOM05D002969 ORTHO05D003308 3.3e-213 746.1 960 44.6
Peaxi162Scf00068g02519 Petunia axillaris HOM05D002969 ORTHO05D003308 9.1e-211 738.0 952 45.7
THA.LOC104813957 Tarenaya hassleriana HOM05D002969 ORTHO05D003308 5.9e-210 735.3 946 47.4
CANSAT54G2721 Cannabis sativa HOM05D002969 ORTHO05D003308 1.2e-207 727.6 934 46.7
Solyc09g009800.3 Solanum lycopersicum HOM05D002969 ORTHO05D003308 2.1e-207 726.9 939 44.9
Sopen09g004560 Solanum pennellii HOM05D002969 ORTHO05D003308 8.0e-207 724.9 944 45.4
EL10Ac9g22289 Beta vulgaris HOM05D002969 ORTHO05D003308 1.7e-204 717.2 1010 45.4
Potri.003G064000 Populus trichocarpa HOM05D002969 ORTHO05D003308 2.8e-204 716.5 939 46.3
AUR62010285 Chenopodium quinoa HOM05D002969 ORTHO05D003308 3.7e-204 716.1 957 47.0
SalBow6G7155 Salvia bowleyana HOM05D002969 ORTHO05D003308 4.8e-204 715.7 954 43.8
Ah.01g018180 Amaranthus hybridus HOM05D002969 ORTHO05D003308 6.5e-201 705.3 948 46.0
Sabra03G0037600 Salix brachista HOM05D002969 ORTHO05D003308 1.9e-200 703.7 962 45.4
Sp3g22890 Schrenkiella parvula HOM05D002969 ORTHO05D003308 1.6e-199 700.7 953 46.4
Carub.0001s1721 Capsella rubella HOM05D002969 ORTHO05D003308 3.6e-199 699.5 956 45.4
Aa31LG7G2260 Aethionema arabicum HOM05D002969 ORTHO05D003308 6.1e-199 698.7 952 45.2
C07p10660 Brassica napus HOM05D002969 ORTHO05D003308 6.1e-199 698.7 952 46.2
A07p07070 Brassica napus HOM05D002969 ORTHO05D003308 1.4e-198 697.6 952 46.2
BraA07t28494Z Brassica rapa HOM05D002969 ORTHO05D003308 1.4e-198 697.6 952 46.2
BcaC06g35804 Brassica carinata HOM05D002969 ORTHO05D003308 3.0e-198 696.4 952 46.1
BolC7t41532H Brassica oleracea HOM05D002969 ORTHO05D003308 3.0e-198 696.4 952 46.1
CARHR018040 Cardamine hirsuta HOM05D002969 ORTHO05D003308 1.3e-196 691.0 933 45.1
AL1G29730 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 3.7e-196 689.5 958 45.7
BcaB06g26734 Brassica carinata HOM05D002969 ORTHO05D003308 8.3e-196 688.3 957 45.1
Carub.0002s0593 Capsella rubella HOM05D002969 ORTHO05D003308 1.3e-193 681.0 930 45.9
AT1G17450 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 5.0e-193 679.1 955 44.8
Thhalv10017997m.g Eutrema salsugineum HOM05D002969 ORTHO05D003308 4.0e-190 669.5 934 44.3
TWI31G0627 Tripterygium wilfordii HOM05D002969 ORTHO05D003308 1.2e-186 657.9 942 42.5
Lalb_Chr10g0094641 Lupinus albus HOM05D002969 ORTHO05D003308 5.6e-184 649.0 949 43.2
AL2G17610 Arabidopsis lyrata HOM05D002969 ORTHO05D003308 1.7e-180 637.5 935 43.7
arahy.Tifrunner.gnm1.ann1.MA4BJF Arachis hypogaea HOM05D002969 ORTHO05D003308 1.2e-178 631.3 940 42.0
FAN02G4452 Fragaria x ananassa HOM05D002969 ORTHO05D003308 7.8e-178 628.6 931 42.3
Glyma.19G263900 Glycine max HOM05D002969 ORTHO05D003308 1.3e-177 627.9 934 42.8
Glyma.02G000100 Glycine max HOM05D002969 ORTHO05D003308 1.7e-177 627.5 940 43.0
arahy.Tifrunner.gnm1.ann1.8DY1VB Arachis hypogaea HOM05D002969 ORTHO05D003308 1.1e-176 624.8 940 41.7
SMO119G0293 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 2.5e-176 623.6 976 40.7
Ah.01g009920 Amaranthus hybridus HOM05D002969 ORTHO05D003308 4.7e-175 619.4 938 42.9
Ca_13957_v3 Cicer arietinum L. HOM05D002969 ORTHO05D003308 1.5e-173 614.4 932 42.0
Prupe.3G042500 Prunus persica HOM05D002969 ORTHO05D003308 2.6e-173 613.6 671 50.1
Mapoly0002s0195 Marchantia polymorpha HOM05D002969 ORTHO05D003308 6.4e-172 609.0 960 40.0
Peaxi162Scf00006g00210 Petunia axillaris HOM05D002969 ORTHO05D003308 9.2e-171 605.1 803 45.1
HPP92_011313 Vanilla planifolia HOM05D002969 ORTHO05D003308 9.2e-171 605.1 934 41.2
Lj3g0017600 Lotus japonicus HOM05D002969 ORTHO05D003308 1.2e-170 604.7 940 41.1
Gohir.D04G009700 Gossypium hirsutum HOM05D002969 ORTHO05D003308 4.3e-168 596.3 665 50.4
Os02g0633100 Oryza sativa ssp. japonica HOM05D002969 ORTHO05D003308 2.1e-167 594.0 936 39.5
Duzib192G0334 Durio zibethinus HOM05D002969 ORTHO05D003308 4.7e-167 592.8 948 40.8
AUR62039104 Chenopodium quinoa HOM05D002969 ORTHO05D003308 3.1e-166 590.1 936 43.5
Phvul.007G234600 Phaseolus vulgaris HOM05D002969 ORTHO05D003308 1.2e-165 588.2 942 41.6
TPR.G14707 Trifolium pratense HOM05D002969 ORTHO05D003308 1.5e-165 587.8 932 40.3
Psat1g003120 Pisum sativum HOM05D002969 ORTHO05D003308 9.9e-165 585.1 928 39.5
Pp3c4_16500 Physcomitrium patens HOM05D002969 ORTHO05D003308 1.3e-164 584.7 974 39.8
Medtr3g005240 Medicago truncatula HOM05D002969 ORTHO05D003308 2.9e-164 583.6 934 40.5
Manes.11G021000 Manihot esculenta HOM05D002969 ORTHO05D003308 6.4e-164 582.4 682 49.3
Zm00001eb254660 Zea mays HOM05D002969 ORTHO05D003308 3.2e-163 580.1 929 38.9
Thecc.06G115400 Theobroma cacao HOM05D002969 ORTHO05D003308 3.5e-162 576.6 986 40.0
Glyma.16G219900 Glycine max HOM05D002969 ORTHO05D003308 1.3e-161 574.7 937 41.2
Cpa.g.sc34.72 Carica papaya HOM05D002969 ORTHO05D003308 1.9e-160 570.9 651 50.1
TPR.G25535 Trifolium pratense HOM05D002969 ORTHO05D003308 4.0e-158 563.1 933 39.1
AagrBONN_evm.TU.Sc2ySwM_344.4533 Anthoceros agrestis HOM05D002969 ORTHO05D003308 6.0e-154 549.3 948 36.9
MBI06_g44919_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 6.6e-153 545.8 578 54.7
SHI10580 Sapria himalayana HOM05D002969 ORTHO05D000023 9.0e-150 535.4 1018 37.7
MBI06_g12843_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 2.9e-148 530.4 580 52.8
SMO196G0130 Selaginella moellendorffii HOM05D002969 ORTHO05D003308 1.2e-141 508.4 963 36.2
Zm00001eb254750 Zea mays HOM05D002969 ORTHO05D003308 1.9e-139 501.1 781 39.6
Cfa003558 Carpinus fangiana HOM05D002969 ORTHO05D003308 3.9e-137 493.4 696 43.7
CiPaw.01G219300 Carya illinoinensis HOM05D002969 ORTHO05D003308 5.8e-133 479.6 405 61.7
Haze_15990 Corylus avellana HOM05D002969 ORTHO05D003308 4.8e-127 459.9 697 42.5
AT1G59470 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 5.9e-117 426.4 729 39.6
Nitab4.5_0010825g0010 Nicotiana tabacum HOM05D002969 ORTHO05D003308 1.0e-116 425.6 941 32.6
COL.COLO4_30698 Corchorus olitorius HOM05D002969 ORTHO05D003308 7.2e-115 419.5 652 41.6
MBI06_g22353_MAGBIO Magnolia biondii HOM05D002969 ORTHO05D003308 2.1e-114 417.9 383 59.3
Gohir.A06G192400 Gossypium hirsutum HOM05D002969 ORTHO05D003308 1.4e-102 378.6 705 38.3
Gorai.010G233800 Gossypium raimondii HOM05D002969 ORTHO05D003308 3.5e-101 374.0 704 37.4
PSO017G1278 Papaver somniferum HOM05D002969 ORTHO05D003308 1.6e-98 365.2 251 77.7
Gohir.D06G200300 Gossypium hirsutum HOM05D002969 ORTHO05D003308 1.4e-97 362.1 704 36.8
vmacro15028 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 6.3e-87 326.6 286 61.2
vmacro15027 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 1.8e-86 325.1 317 56.5
Os02g0316900 Oryza sativa ssp. japonica HOM05D002969 ORTHO05D003308 1.6e-85 322.0 644 34.2
Zm00001eb254680 Zea mays HOM05D002969 ORTHO05D003308 1.7e-79 302.0 354 46.0
Glyma.12G000400 Glycine max HOM05D002969 ORTHO05D003308 1.7e-76 292.0 476 40.1
MD11G1308600 Malus domestica HOM05D002969 ORTHO05D003308 3.8e-76 290.8 487 41.5
PSO478G1045 Papaver somniferum HOM05D002969 ORTHO05D003308 5.0e-76 290.4 199 81.4
Peaxi162Scf00559g00315 Petunia axillaris HOM05D002969 ORTHO05D003308 3.3e-75 287.7 415 42.7
vmacro15025 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 5.5e-75 287.0 280 57.5
Zm00001eb247960 Zea mays HOM05D002969 ORTHO05D003308 7.5e-72 276.6 322 46.3
Phvul.011G011400 Phaseolus vulgaris HOM05D002969 ORTHO05D003308 9.5e-67 259.6 706 32.0
vmacro15024 Vaccinium macrocarpon HOM05D002969 ORTHO05D003308 6.8e-65 253.4 282 52.8
CiPaw.01G219400 Carya illinoinensis HOM05D002969 ORTHO05D003308 3.5e-61 241.1 270 52.6
Zm00001eb254770 Zea mays HOM05D002969 ORTHO05D003308 2.1e-58 231.9 322 41.3
Cpa.g.sc34.76 Carica papaya HOM05D002969 ORTHO05D003308 9.8e-56 223.0 271 50.9
Zm00001eb247980 Zea mays HOM05D002969 ORTHO05D003308 2.1e-53 215.3 296 41.6
AT1G59460 Arabidopsis thaliana HOM05D002969 ORTHO05D003308 1.5e-48 199.1 207 53.1
Lalb_Chr10g0094391 Lupinus albus HOM05D002969 ORTHO05D003308 4.6e-45 187.6 206 49.5
Aqoxy4G01956 Aquilegia oxysepala HOM05D002969 ORTHO05D003308 4.3e-43 181.0 348 37.4
Os05g0569900 Oryza sativa ssp. japonica HOM05D002969 ORTHO05D003308 6.8e-41 173.7 271 37.6
GSVIVG01001689001 Vitis vinifera HOM05D002969 ORTHO05D003308 2.3e-36 158.7 180 51.7
COL.COLO4_27975 Corchorus olitorius HOM05D002969 ORTHO05D003308 1.7e-31 142.5 181 49.7
FvH4_2g23920 Fragaria vesca HOM05D002969 ORTHO05D003308 1.6e-29 136.0 486 26.7
FAN24G1542 Fragaria x ananassa HOM05D002969 ORTHO05D003308 1.6e-29 136.0 486 26.7
FAN15G1247 Fragaria x ananassa HOM05D002969 ORTHO05D003308 7.9e-29 133.7 483 27.5
FAN27G1917 Fragaria x ananassa HOM05D002969 ORTHO05D003308 3.9e-28 131.3 486 25.7
SEGI_18157 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 4.0e-25 121.3 98 63.3
SEGI_24169 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 1.3e-23 116.3 91 61.5
SEGI_00337 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 1.7e-23 115.9 136 51.5
Cre12.g518107 Chlamydomonas reinhardtii HOM05D002969 ORTHO05D003308 1.4e-22 112.8 461 22.6
Ah.01g009880 Amaranthus hybridus HOM05D002969 ORTHO05D003308 2.7e-21 108.6 101 59.4
Zm00001eb254790 Zea mays HOM05D002969 ORTHO05D003308 1.9e-19 102.4 120 47.5
unitig_26.g8927 Utricularia gibba HOM05D002969 ORTHO05D003308 7.4e-19 100.5 251 32.3
CAN.G397.52 Capsicum annuum HOM05D002969 ORTHO05D003308 1.5e-16 92.8 132 40.9
SEGI_18101 Sequoiadendron giganteum HOM05D002969 ORTHO05D003308 9.3e-14 83.6 104 43.3
Nitab4.5_0010825g0020 Nicotiana tabacum HOM05D002969 ORTHO05D003308 5.1e-12 77.8 145 32.4
RcHm_v2.0_Chr6g0291541 Rosa chinensis HOM05D002969 ORTHO05D003308 1.9e-11 75.9 136 39.0
Peaxi162Scf00006g00211 Petunia axillaris HOM05D002969 ORTHO05D003308 9.6e-11 73.6 126 35.7
CARHR117350 Cardamine hirsuta HOM05D002969 ORTHO05D003308 4.8e-10 71.2 81 48.1
RcHm_v2.0_Chr6g0291551 Rosa chinensis HOM05D002969 ORTHO05D003308 1.0e-07 63.5 103 33.0
COL.COLO4_30699 Corchorus olitorius HOM05D002969 ORTHO05D003308 1.7e-07 62.8 136 35.3


User provided reference genes

Program Settings