Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 2.2e-216 755.4 380 100.0
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-177 626.7 380 85.0
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 5.2e-162 574.7 377 79.0
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-159 566.6 380 77.4
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 3.0e-157 558.9 382 72.5
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-154 550.4 334 81.4
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 5.8e-153 544.7 335 80.9
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 2.8e-147 525.8 380 70.3
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 9.0e-146 520.8 337 76.0
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 2.0e-145 519.6 336 75.3
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 4.9e-144 515.0 335 75.5
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.9e-140 503.1 334 72.2
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 6.9e-138 494.6 335 71.6
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 3.8e-136 488.8 325 75.1
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 6.4e-128 461.5 341 65.4
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 1.9e-127 459.9 329 69.0
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 2.1e-126 456.4 323 68.4
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 1.0e-125 454.1 324 70.1
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 2.0e-113 413.3 337 60.8
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 3.8e-112 409.1 329 61.4
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 9.4e-111 404.4 343 58.9
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 5.5e-103 378.6 265 68.3
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 2.2e-96 356.7 216 84.3
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 7.2e-95 351.7 331 55.3
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 1.0e-93 347.8 329 54.1
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 1.4e-93 347.4 330 54.8
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 1.4e-93 347.4 330 55.2
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 3.9e-93 345.9 330 53.6
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 5.2e-93 345.5 329 54.7
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 6.7e-93 345.1 334 53.6
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 6.7e-93 345.1 330 53.6
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.6e-92 343.2 330 53.6
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 3.3e-92 342.8 330 54.8
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 5.7e-92 342.0 335 54.6
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 7.4e-92 341.7 330 54.2
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 7.4e-92 341.7 326 54.9
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 9.7e-92 341.3 329 53.2
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 1.7e-91 340.5 334 53.3
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 2.2e-91 340.1 326 54.6
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 2.8e-91 339.7 331 55.6
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 3.7e-91 339.3 330 53.9
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 4.8e-91 339.0 334 53.6
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 4.8e-91 339.0 334 53.6
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 4.8e-91 339.0 330 55.2
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 6.3e-91 338.6 337 53.4
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 6.3e-91 338.6 329 53.8
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 8.2e-91 338.2 329 54.4
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 1.1e-90 337.8 330 53.9
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 1.8e-90 337.0 329 53.2
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 2.4e-90 336.7 329 53.5
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 2.4e-90 336.7 331 53.8
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 4.1e-90 335.9 334 53.0
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 4.1e-90 335.9 334 53.3
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 4.1e-90 335.9 330 54.8
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 4.1e-90 335.9 330 52.7
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 7.0e-90 335.1 329 53.2
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 7.0e-90 335.1 328 54.0
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 9.1e-90 334.7 328 53.4
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 9.1e-90 334.7 328 53.4
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 9.1e-90 334.7 330 53.6
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 9.1e-90 334.7 330 51.8
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 1.6e-89 334.0 329 53.8
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 1.6e-89 334.0 330 53.3
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 5.9e-89 332.0 316 54.1
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 5.9e-89 332.0 330 51.8
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 1.0e-88 331.3 330 52.4
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 1.0e-88 331.3 330 53.9
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 2.9e-88 329.7 330 53.6
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 2.9e-88 329.7 330 53.0
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 2.9e-88 329.7 330 52.7
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 3.8e-88 329.3 328 52.7
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 3.8e-88 329.3 330 53.6
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 3.8e-88 329.3 330 52.4
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 5.0e-88 328.9 330 52.1
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 8.5e-88 328.2 329 51.7
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 8.5e-88 328.2 330 52.1
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 1.1e-87 327.8 329 53.5
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 1.1e-87 327.8 329 52.3
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 1.5e-87 327.4 330 52.4
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 1.5e-87 327.4 328 51.5
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 3.2e-87 326.2 330 52.4
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 3.2e-87 326.2 330 52.4
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 3.2e-87 326.2 331 52.6
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 5.5e-87 325.5 334 51.8
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 9.4e-87 324.7 330 50.9
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.2e-86 324.3 330 50.6
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 1.6e-86 323.9 328 52.4
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 4.7e-86 322.4 330 50.9
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 6.1e-86 322.0 329 52.0
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 8.0e-86 321.6 329 50.8
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 8.0e-86 321.6 330 51.2
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 1.0e-85 321.2 334 50.0
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 1.4e-85 320.9 330 51.5
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 1.8e-85 320.5 330 52.4
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 2.3e-85 320.1 330 52.4
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 2.3e-85 320.1 326 53.1
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 2.3e-85 320.1 330 51.8
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 3.0e-85 319.7 328 51.5
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 1.2e-84 317.8 330 50.9
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 2.6e-84 316.6 330 50.9
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 2.6e-84 316.6 349 49.6
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 2.6e-84 316.6 330 51.2
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 5.7e-84 315.5 349 47.3
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 5.7e-84 315.5 330 50.3
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 7.5e-84 315.1 330 50.3
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 9.7e-84 314.7 330 51.8
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 2.8e-83 313.2 331 49.8
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 3.7e-83 312.8 330 50.3
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 4.8e-83 312.4 330 51.2
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 6.3e-83 312.0 320 51.2
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 1.1e-82 311.2 330 50.0
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 1.8e-82 310.5 328 50.0
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 5.3e-82 308.9 349 50.4
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 1.0e-80 304.7 342 46.2
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 1.3e-80 304.3 325 48.6
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 1.3e-80 304.3 324 51.9
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 1.1e-79 301.2 369 46.6
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 1.5e-79 300.8 369 46.9
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.2e-76 291.2 330 47.9
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 1.3e-75 287.7 401 42.9
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 1.2e-73 281.2 330 47.6
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 2.3e-72 276.9 330 48.8
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 3.8e-72 276.2 276 50.4
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 6.8e-69 265.4 271 51.7
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 5.7e-68 262.3 348 43.7
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 2.8e-67 260.0 276 50.7
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 9.2e-66 255.0 227 58.6
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 2.8e-62 243.4 334 45.8
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 3.1e-61 240.0 352 41.2
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 2.6e-60 236.9 227 54.2
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 3.4e-60 236.5 196 59.7
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 4.1e-58 229.6 189 58.7
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 1.3e-51 208.0 214 52.3
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 1.3e-48 198.0 232 46.1
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 5.2e-37 159.5 149 54.4
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-32 144.8 98 71.4
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 2.5e-31 140.6 150 48.7
MBI18_g38521_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 2.8e-30 137.1 171 49.7
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 2.4e-29 134.0 180 43.3
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 7.6e-28 129.0 369 28.5
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 1.7e-27 127.9 143 47.6
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 2.9e-27 127.1 352 31.0
TPR.G9891 Trifolium pratense HOM05D004164 ORTHO05D004891 1.4e-26 124.8 174 48.3
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 5.1e-24 116.3 122 53.3
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 9.6e-23 112.1 359 29.5
FvH4_2g11890 Fragaria vesca HOM05D004164 ORTHO05D004891 8.1e-22 109.0 135 44.4
FAN24G2526 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.5e-20 104.8 105 47.6
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 1.9e-18 97.8 303 29.0
TPR.G19821 Trifolium pratense HOM05D004164 ORTHO05D004891 2.4e-18 97.4 165 39.4
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 3.2e-18 97.1 214 33.2
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 2.1e-14 84.3 365 26.8
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 2.8e-14 84.0 268 29.5
Prupe.8G063900 Prunus persica HOM05D004164 ORTHO05D004891 7.6e-12 75.9 63 52.4
MCO10G397 Micromonas commoda HOM05D004164 ORTHO05D004891 2.2e-11 74.3 225 32.9
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 2.7e-09 67.4 68 38.2
CSS0002492 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 2.3e-08 64.3 68 47.1
MBI02_g02172_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 5.1e-08 63.2 43 65.1
Zm00001eb051650 Zea mays HOM05D004164 ORTHO05D004891 1.9e-07 61.2 65 46.2
Hma1.2p1_0784F.1_g217070 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 3.3e-07 60.5 70 41.4
Nn5g30063 Nelumbo nucifera HOM05D004164 ORTHO05D004891 7.4e-07 59.3 52 53.8
TAR019G0004 Trochodendron aralioides HOM05D004164 ORTHO05D004891 1.6e-06 58.2 49 53.1


User provided reference genes

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