Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 1.3e-117 426.4 222 100.0
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 1.5e-113 412.9 222 97.3
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 3.7e-75 285.4 232 68.5
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 2.0e-73 279.6 224 67.4
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 1.7e-72 276.6 175 77.7
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 2.9e-72 275.8 160 81.9
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 3.2e-71 272.3 185 75.1
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 2.1e-70 269.6 186 70.4
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 3.6e-70 268.9 177 76.3
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 6.1e-70 268.1 178 75.8
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 8.0e-70 267.7 180 75.0
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 8.0e-70 267.7 210 66.2
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 1.4e-69 266.9 170 80.0
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 2.3e-69 266.2 180 73.9
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 2.3e-69 266.2 167 76.6
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 2.3e-69 266.2 180 73.3
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 4.0e-69 265.4 227 63.9
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 4.0e-69 265.4 242 59.9
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 4.0e-69 265.4 226 63.3
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 5.2e-69 265.0 180 73.3
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 5.2e-69 265.0 184 75.0
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 6.8e-69 264.6 167 76.0
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 8.8e-69 264.2 235 62.1
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 1.2e-68 263.8 180 72.2
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 2.0e-68 263.1 179 75.4
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 2.0e-68 263.1 187 68.4
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 3.4e-68 262.3 146 84.9
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 3.4e-68 262.3 235 61.7
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 3.4e-68 262.3 174 73.6
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 4.4e-68 261.9 158 80.4
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 4.4e-68 261.9 165 75.8
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 4.4e-68 261.9 146 84.9
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 4.4e-68 261.9 165 79.4
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 4.4e-68 261.9 170 77.1
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 5.7e-68 261.5 148 81.8
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 7.5e-68 261.2 186 68.8
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 7.5e-68 261.2 174 74.1
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 9.8e-68 260.8 187 70.1
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 2.8e-67 259.2 224 62.1
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 3.7e-67 258.8 170 76.5
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 3.7e-67 258.8 234 59.4
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 4.8e-67 258.5 210 63.8
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 6.3e-67 258.1 174 72.4
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 6.3e-67 258.1 225 63.1
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 8.3e-67 257.7 168 75.0
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 1.8e-66 256.5 160 78.1
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 1.8e-66 256.5 146 81.5
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 3.1e-66 255.8 143 83.2
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 5.4e-66 255.0 148 81.8
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 9.1e-66 254.2 169 75.7
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 2.7e-65 252.7 167 77.8
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 3.5e-65 252.3 218 60.6
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 3.5e-65 252.3 178 69.7
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 3.5e-65 252.3 166 74.1
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 7.7e-65 251.1 154 78.6
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 7.7e-65 251.1 229 61.1
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 1.7e-64 250.0 206 65.0
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 2.2e-64 249.6 224 59.4
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 2.9e-64 249.2 166 73.5
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 2.9e-64 249.2 162 75.9
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 2.9e-64 249.2 166 74.1
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 2.9e-64 249.2 237 58.2
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 3.8e-64 248.8 145 80.7
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 8.5e-64 247.7 165 73.3
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 8.5e-64 247.7 165 75.2
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 8.5e-64 247.7 169 71.0
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 1.5e-63 246.9 213 60.6
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 2.5e-63 246.1 164 73.2
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 4.2e-63 245.4 229 58.5
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 4.2e-63 245.4 148 78.4
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 4.2e-63 245.4 210 61.0
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 7.2e-63 244.6 166 72.9
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 7.2e-63 244.6 166 72.9
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 7.2e-63 244.6 166 73.5
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 9.5e-63 244.2 164 72.0
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 2.7e-62 242.7 181 67.4
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 2.7e-62 242.7 181 67.4
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 6.1e-62 241.5 166 69.9
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 8.0e-62 241.1 144 77.8
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 8.0e-62 241.1 168 72.0
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 4.0e-61 238.8 137 81.8
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 6.8e-61 238.0 212 59.0
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.5e-60 236.9 136 83.1
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 2.0e-60 236.5 216 63.0
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 2.6e-60 236.1 224 61.6
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 1.3e-59 233.8 169 67.5
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 1.1e-58 230.7 135 80.0
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 1.8e-58 229.9 133 81.2
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 4.1e-58 228.8 168 68.5
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 9.2e-58 227.6 173 67.1
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 2.0e-57 226.5 129 82.9
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 3.5e-57 225.7 162 70.4
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 1.7e-56 223.4 161 67.1
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 1.4e-53 213.8 158 63.3
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 1.5e-47 193.7 184 54.3
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 8.9e-45 184.5 98 85.7
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 5.4e-42 175.3 90 85.6
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 2.3e-40 169.9 130 61.5
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 5.0e-40 168.7 181 47.0
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 2.3e-37 159.8 175 55.4
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 1.2e-36 157.5 172 53.5
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 3.2e-34 149.4 135 56.3
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 2.7e-33 146.4 170 54.1
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 3.5e-33 146.0 75 86.7
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 1.0e-32 144.4 120 60.8
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 6.6e-32 141.7 105 70.5
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 1.5e-31 140.6 121 57.0
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 2.5e-31 139.8 92 75.0
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 6.2e-30 135.2 82 76.8
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 6.8e-29 131.7 81 81.5
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 3.2e-26 122.9 80 75.0
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 1.0e-24 117.9 68 79.4
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 2.0e-20 103.6 56 83.9


User provided reference genes

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