Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6104 Papaver somniferum HOM05D002925 ORTHO05D003247 9.0e-136 486.9 238 100.0
PSO829G0001 Papaver somniferum HOM05D002925 ORTHO05D003247 1.3e-102 376.7 242 80.2
PSO447G0391 Papaver somniferum HOM05D002925 ORTHO05D003247 2.0e-98 362.8 243 78.2
TAR625G1540 Trochodendron aralioides HOM05D002925 ORTHO05D003247 3.1e-35 152.9 165 49.7
Nn1g05384 Nelumbo nucifera HOM05D002925 ORTHO05D003247 1.5e-34 150.6 165 49.7
TAR076G0002 Trochodendron aralioides HOM05D002925 ORTHO05D003247 2.1e-31 140.2 165 47.3
Aqoxy6G00762 Aquilegia oxysepala HOM05D002925 ORTHO05D003247 3.5e-31 139.4 165 46.7
GSVIVG01015726001 Vitis vinifera HOM05D002925 ORTHO05D003247 7.8e-31 138.3 193 41.5
QL11p021491 Quercus lobata HOM05D002925 ORTHO05D003247 8.7e-30 134.8 166 42.2
Medtr2g009040 Medicago truncatula HOM05D002925 ORTHO05D003247 1.9e-29 133.7 223 35.9
RcHm_v2.0_Chr6g0271751 Rosa chinensis HOM05D002925 ORTHO05D003247 1.9e-29 133.7 166 42.8
Dinv09022 Davidia involucrata HOM05D002925 ORTHO05D003247 1.6e-28 130.6 164 43.9
Cfa005642 Carpinus fangiana HOM05D002925 ORTHO05D003247 3.6e-28 129.4 164 42.7
Prupe.8G062800 Prunus persica HOM05D002925 ORTHO05D003247 3.6e-28 129.4 168 43.5
MD10G1050700 Malus domestica HOM05D002925 ORTHO05D003247 4.7e-28 129.0 163 41.7
Haze_10615 Corylus avellana HOM05D002925 ORTHO05D003247 8.1e-28 128.3 164 42.7
FAN24G2963 Fragaria x ananassa HOM05D002925 ORTHO05D003247 8.1e-28 128.3 171 42.1
Ca_00141_v3 Cicer arietinum L. HOM05D002925 ORTHO05D003247 1.1e-27 127.9 215 34.9
Psat1g216280 Pisum sativum HOM05D002925 ORTHO05D003247 1.4e-27 127.5 215 35.3
FAN20G1033 Fragaria x ananassa HOM05D002925 ORTHO05D003247 2.4e-27 126.7 172 41.3
MD05G1043400 Malus domestica HOM05D002925 ORTHO05D003247 2.4e-27 126.7 168 42.9
FvH4_2g11920 Fragaria vesca HOM05D002925 ORTHO05D003247 3.1e-27 126.3 171 41.5
Hma1.2p1_0522F.1_g171730 Hydrangea macrophylla HOM05D002925 ORTHO05D003247 4.0e-27 125.9 186 40.3
CiPaw.06G154400 Carya illinoinensis HOM05D002925 ORTHO05D003247 9.0e-27 124.8 164 40.2
MBI02_g35745_MAGBIO Magnolia biondii HOM05D002925 ORTHO05D003247 1.2e-26 124.4 165 44.2
Lalb_Chr18g0060531 Lupinus albus HOM05D002925 ORTHO05D003247 1.5e-26 124.0 171 40.4
FAN15G3696 Fragaria x ananassa HOM05D002925 ORTHO05D003247 2.6e-26 123.2 171 40.4
CSS0032438 Camellia sinensis var. sinensis HOM05D002925 ORTHO05D003247 3.4e-26 122.9 164 43.3
Manes.07G032600 Manihot esculenta HOM05D002925 ORTHO05D003247 3.4e-26 122.9 166 42.2
Ciclev10027826m.g Citrus clementina HOM05D002925 ORTHO05D003247 4.4e-26 122.5 163 41.7
Atru.chr6.1160 Acer truncatum HOM05D002925 ORTHO05D003247 7.6e-26 121.7 164 42.7
Lj6g0016748 Lotus japonicus HOM05D002925 ORTHO05D003247 9.9e-26 121.3 205 34.1
Glyma.15G054200 Glycine max HOM05D002925 ORTHO05D003247 1.3e-25 120.9 164 42.1
CSS0049612 Camellia sinensis var. sinensis HOM05D002925 ORTHO05D003247 2.9e-25 119.8 164 39.6
Phvul.006G205800 Phaseolus vulgaris HOM05D002925 ORTHO05D003247 2.9e-25 119.8 165 39.4
VMungo0540G1175 Vigna mungo HOM05D002925 ORTHO05D003247 3.8e-25 119.4 172 40.1
Lalb_Chr15g0090391 Lupinus albus HOM05D002925 ORTHO05D003247 8.4e-25 118.2 173 40.5
QL12p036977 Quercus lobata HOM05D002925 ORTHO05D003247 8.4e-25 118.2 201 36.3
SalBow7G1697 Salvia bowleyana HOM05D002925 ORTHO05D003247 2.4e-24 116.7 165 41.8
Actinidia00276 Actinidia chinensis HOM05D002925 ORTHO05D003247 3.2e-24 116.3 205 34.6
Eucgr.I02657 Eucalyptus grandis HOM05D002925 ORTHO05D003247 7.1e-24 115.2 164 40.9
Gohir.A03G174900 Gossypium hirsutum HOM05D002925 ORTHO05D003247 9.3e-24 114.8 163 38.0
MBI02_g05741_MAGBIO Magnolia biondii HOM05D002925 ORTHO05D003247 9.3e-24 114.8 165 43.6
Migut.C00133 Erythranthe guttata HOM05D002925 ORTHO05D003247 1.2e-23 114.4 164 39.6
Glyma.08G178400 Glycine max HOM05D002925 ORTHO05D003247 1.2e-23 114.4 163 39.3
arahy.Tifrunner.gnm1.ann1.VGLF4N Arachis hypogaea HOM05D002925 ORTHO05D003247 1.6e-23 114.0 164 38.4
arahy.Tifrunner.gnm1.ann1.M5A3LZ Arachis hypogaea HOM05D002925 ORTHO05D003247 2.1e-23 113.6 164 38.4
Dinv24181 Davidia involucrata HOM05D002925 ORTHO05D003247 2.1e-23 113.6 163 37.4
Thecc.02G136300 Theobroma cacao HOM05D002925 ORTHO05D003247 2.7e-23 113.2 170 39.4
Gorai.005G221500 Gossypium raimondii HOM05D002925 ORTHO05D003247 6.0e-23 112.1 164 39.0
Cc02_g21380 Coffea canephora HOM05D002925 ORTHO05D003247 7.8e-23 111.7 166 36.7
Gohir.D02G198200 Gossypium hirsutum HOM05D002925 ORTHO05D003247 7.8e-23 111.7 164 39.0
Sabra16G0197500 Salix brachista HOM05D002925 ORTHO05D003247 1.0e-22 111.3 166 39.8
MBI02_g36599_MAGBIO Magnolia biondii HOM05D002925 ORTHO05D003247 1.3e-22 110.9 165 42.4
MSTRG.24975 Avicennia marina HOM05D002925 ORTHO05D003247 3.0e-22 109.8 167 41.9
Solyc01g105330.3 Solanum lycopersicum HOM05D002925 ORTHO05D003247 3.9e-22 109.4 179 35.8
MSTRG.20293 Avicennia marina HOM05D002925 ORTHO05D003247 5.1e-22 109.0 169 37.9
Sopen01g047830 Solanum pennellii HOM05D002925 ORTHO05D003247 5.1e-22 109.0 179 35.8
Peaxi162Scf00392g00416 Petunia axillaris HOM05D002925 ORTHO05D003247 6.6e-22 108.6 165 41.8
Peaxi162Scf00001g00002 Petunia axillaris HOM05D002925 ORTHO05D003247 8.7e-22 108.2 176 36.9
Potri.001G312900 Populus trichocarpa HOM05D002925 ORTHO05D003247 8.7e-22 108.2 163 38.7
RcHm_v2.0_Chr6g0271621 Rosa chinensis HOM05D002925 ORTHO05D003247 8.7e-22 108.2 79 60.8
vmacro21264 Vaccinium macrocarpon HOM05D002925 ORTHO05D003247 8.7e-22 108.2 164 37.8
PGSC0003DMG400006417 Solanum tuberosum HOM05D002925 ORTHO05D003247 1.1e-21 107.8 163 41.7
TWI59G1115 Tripterygium wilfordii HOM05D002925 ORTHO05D003247 1.5e-21 107.5 165 40.0
CDE10G0644 Ceratophyllum demersum HOM05D002925 ORTHO05D003247 1.9e-21 107.1 163 38.7
Solyc04g074250.3 Solanum lycopersicum HOM05D002925 ORTHO05D003247 2.5e-21 106.7 163 41.1
Sopen04g029390 Solanum pennellii HOM05D002925 ORTHO05D003247 2.5e-21 106.7 163 41.1
Rhsim11G0137200 Rhododendron simsii HOM05D002925 ORTHO05D003247 3.3e-21 106.3 170 39.4
CAN.G193.33 Capsicum annuum HOM05D002925 ORTHO05D000105 4.3e-21 105.9 158 42.4
Sabra02G0076700 Salix brachista HOM05D002925 ORTHO05D003247 4.3e-21 105.9 171 38.6
SalBow5G0297 Salvia bowleyana HOM05D002925 ORTHO05D003247 4.3e-21 105.9 167 37.7
SalBow5G2582 Salvia bowleyana HOM05D002925 ORTHO05D003247 4.3e-21 105.9 167 37.7
Potri.005G164100 Populus trichocarpa HOM05D002925 ORTHO05D003247 7.3e-21 105.1 166 38.0
Migut.B00599 Erythranthe guttata HOM05D002925 ORTHO05D003247 9.6e-21 104.8 164 37.2
CDE10G0684 Ceratophyllum demersum HOM05D002925 ORTHO05D003247 1.3e-20 104.4 178 36.0
GSVIVG01009040001 Vitis vinifera HOM05D002925 ORTHO05D003247 2.1e-20 103.6 164 38.4
SGA_v2.0_scaffold74G24580 Striga asiatica HOM05D002925 ORTHO05D003247 3.6e-20 102.8 165 37.6
Rhsim06G0081200 Rhododendron simsii HOM05D002925 ORTHO05D003247 8.1e-20 101.7 164 36.6
SGA_v2.0_scaffold83G26306 Striga asiatica HOM05D002925 ORTHO05D003247 1.1e-19 101.3 171 38.0
Cpa.g.sc42.38 Carica papaya HOM05D002925 ORTHO05D003247 1.4e-19 100.9 79 57.0
vmacro01830 Vaccinium macrocarpon HOM05D002925 ORTHO05D003247 1.8e-19 100.5 169 39.1
Oeu036916.1 Olea europaea HOM05D002925 ORTHO05D003247 2.4e-19 100.1 163 34.4
Nitab4.5_0000232g0050 Nicotiana tabacum HOM05D002925 ORTHO05D003247 5.3e-19 99.0 172 37.2
Sc18g0006800 Simmondsia chinensis HOM05D002925 ORTHO05D003247 9.0e-19 98.2 163 33.7
EL10Ac1g01207 Beta vulgaris HOM05D002925 ORTHO05D003247 1.5e-18 97.4 178 34.3
Actinidia29592 Actinidia chinensis HOM05D002925 ORTHO05D003247 2.6e-18 96.7 163 38.0
CiPaw.07G178900 Carya illinoinensis HOM05D002925 ORTHO05D003247 4.5e-18 95.9 194 32.5
Manes.18G066500 Manihot esculenta HOM05D002925 ORTHO05D003247 4.5e-18 95.9 164 37.2
AUR62018927 Chenopodium quinoa HOM05D002925 ORTHO05D003247 5.8e-18 95.5 175 34.9
ATR0782G164 Amborella trichopoda HOM05D002925 ORTHO05D003247 1.3e-17 94.4 169 34.3
Haze_22278 Corylus avellana HOM05D002925 ORTHO05D003247 1.3e-17 94.4 164 34.8
Nitab4.5_0006616g0010 Nicotiana tabacum HOM05D002925 ORTHO05D003247 2.2e-17 93.6 172 36.0
Actinidia33129 Actinidia chinensis HOM05D002925 ORTHO05D003247 2.9e-17 93.2 164 38.4
PGR031G1025 Punica granatum HOM05D002925 ORTHO05D003247 2.9e-17 93.2 166 33.1
Actinidia24000 Actinidia chinensis HOM05D002925 ORTHO05D003247 3.8e-17 92.8 194 32.5
Cc10_g07100 Coffea canephora HOM05D002925 ORTHO05D003247 4.9e-17 92.4 182 32.4
Cfa013644 Carpinus fangiana HOM05D002925 ORTHO05D003247 1.1e-16 91.3 164 33.5
EL10Ac9g21492 Beta vulgaris HOM05D002925 ORTHO05D003247 3.2e-16 89.7 232 30.6
Ah.05g169890 Amaranthus hybridus HOM05D002925 ORTHO05D003247 4.2e-16 89.4 172 33.1
Nitab4.5_0000863g0180 Nicotiana tabacum HOM05D002925 ORTHO05D003247 7.1e-16 88.6 175 33.7
Potri.002G097700 Populus trichocarpa HOM05D002925 ORTHO05D003247 9.3e-16 88.2 74 50.0
AUR62027772 Chenopodium quinoa HOM05D002925 ORTHO05D003247 1.6e-15 87.4 179 33.0
COL.COLO4_29615 Corchorus olitorius HOM05D002925 ORTHO05D003247 1.6e-15 87.4 163 36.8
Duzib116G0838 Durio zibethinus HOM05D002925 ORTHO05D003247 4.6e-15 85.9 163 33.7
TWI56G0820 Tripterygium wilfordii HOM05D002925 ORTHO05D003247 4.6e-15 85.9 165 33.3
Ah.01g022240 Amaranthus hybridus HOM05D002925 ORTHO05D003247 1.8e-14 84.0 183 30.1
PGSC0003DMG400012552 Solanum tuberosum HOM05D002925 ORTHO05D003247 1.8e-14 84.0 179 32.4
Duzib093G1387 Durio zibethinus HOM05D002925 ORTHO05D003247 3.0e-14 83.2 163 33.7
Nitab4.5_0001619g0030 Nicotiana tabacum HOM05D002925 ORTHO05D003247 3.0e-14 83.2 176 31.2
CAN.G523.55 Capsicum annuum HOM05D002925 ORTHO05D003247 8.7e-14 81.6 180 32.2
AUR62013144 Chenopodium quinoa HOM05D002925 ORTHO05D003247 8.7e-14 81.6 243 28.4
SHI39627 Sapria himalayana HOM05D002925 ORTHO05D003247 1.1e-13 81.3 98 41.8
Hund26967 Selenicereus undatus HOM05D002925 ORTHO05D003247 1.9e-13 80.5 171 33.3
COL.COLO4_16382 Corchorus olitorius HOM05D002925 ORTHO05D003247 3.3e-13 79.7 162 29.6
Sc23g0000240 Simmondsia chinensis HOM05D002925 ORTHO05D003247 7.4e-13 78.6 169 34.3
HPP92_011216 Vanilla planifolia HOM05D002925 ORTHO05D003247 1.3e-12 77.8 164 36.0
Gohir.D01G114901 Gossypium hirsutum HOM05D002925 ORTHO05D003247 2.8e-12 76.6 222 27.9
Gorai.002G140700 Gossypium raimondii HOM05D002925 ORTHO05D003247 2.8e-12 76.6 222 27.9
CANSAT25G0699 Cannabis sativa HOM05D002925 ORTHO05D003247 4.8e-12 75.9 171 31.6
SGA_v2.0_scaffold14G07129 Striga asiatica HOM05D002925 ORTHO05D003247 6.2e-12 75.5 209 28.2
Gohir.A01G127000 Gossypium hirsutum HOM05D002925 ORTHO05D003247 8.1e-12 75.1 179 29.6
Thecc.08G105500 Theobroma cacao HOM05D002925 ORTHO05D003247 6.9e-11 72.0 74 44.6
TPR.G25224 Trifolium pratense HOM05D002925 ORTHO05D003247 6.9e-11 72.0 43 69.8
Zm00001eb033590 Zea mays HOM05D036816 ORTHO05D003247 3.4e-10 69.7 75 44.0
AUR62010148 Chenopodium quinoa HOM05D002925 ORTHO05D003247 1.7e-09 67.4 246 26.8
Duzib041G0069 Durio zibethinus HOM05D002925 ORTHO05D003247 1.7e-09 67.4 65 44.6
HanXRQChr05g0145421 Helianthus annuus HOM05D002925 ORTHO05D003247 3.2e-08 63.2 164 28.7
THA.LOC104807164 Tarenaya hassleriana HOM05D002925 ORTHO05D003247 5.1e-06 55.8 144 26.4


User provided reference genes

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