Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5923 Papaver somniferum HOM05D001695 ORTHO05D002735 1.3e-67 259.6 136 100.0
PSO461G0037 Papaver somniferum HOM05D001695 ORTHO05D002735 1.2e-60 236.5 135 91.1
Solyc09g065750.3 Solanum lycopersicum HOM05D001695 ORTHO05D002735 4.1e-16 88.6 120 44.2
GSVIVG01003138001 Vitis vinifera HOM05D001695 ORTHO05D002735 1.5e-15 86.7 75 60.0
Aqoxy2G03493 Aquilegia oxysepala HOM05D001695 ORTHO05D002735 2.0e-15 86.3 130 40.8
CiPaw.04G181000 Carya illinoinensis HOM05D001695 ORTHO05D002735 5.9e-15 84.7 101 49.5
TAR365G0574 Trochodendron aralioides HOM05D001695 ORTHO05D002735 5.9e-15 84.7 121 44.6
Psat6g058200 Pisum sativum HOM05D001695 ORTHO05D002735 7.7e-15 84.3 124 40.3
Peaxi162Scf00165g00212 Petunia axillaris HOM05D001695 ORTHO05D002735 2.9e-14 82.4 71 54.9
MD03G1256200 Malus domestica HOM05D001695 ORTHO05D002735 3.8e-14 82.0 105 46.7
Atru.chr5.1541 Acer truncatum HOM05D001695 ORTHO05D002735 5.0e-14 81.6 68 60.3
FAN27G1986 Fragaria x ananassa HOM05D001695 ORTHO05D002735 5.0e-14 81.6 108 46.3
FAN20G2833 Fragaria x ananassa HOM05D001695 ORTHO05D002735 6.5e-14 81.3 126 42.9
MD11G1277000 Malus domestica HOM05D001695 ORTHO05D002735 6.5e-14 81.3 105 46.7
FAN15G1129 Fragaria x ananassa HOM05D001695 ORTHO05D002735 8.5e-14 80.9 126 42.1
CANSAT25G1261 Cannabis sativa HOM05D001695 ORTHO05D002735 1.4e-13 80.1 71 54.9
Medtr1g471050 Medicago truncatula HOM05D001695 ORTHO05D002735 1.9e-13 79.7 85 47.1
TPR.G39069 Trifolium pratense HOM05D001695 ORTHO05D002735 1.9e-13 79.7 123 43.1
Prupe.8G233300 Prunus persica HOM05D001695 ORTHO05D002735 2.5e-13 79.3 96 46.9
Lj1g0012318 Lotus japonicus HOM05D001695 ORTHO05D002735 3.2e-13 79.0 101 49.5
Actinidia24930 Actinidia chinensis HOM05D001695 ORTHO05D002735 5.5e-13 78.2 72 51.4
Nn3g19467 Nelumbo nucifera HOM05D001695 ORTHO05D002735 5.5e-13 78.2 65 60.0
CiPaw.03G256000 Carya illinoinensis HOM05D001695 ORTHO05D002735 7.2e-13 77.8 71 54.9
CSS0025398 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 9.4e-13 77.4 120 41.7
FvH4_2g22790 Fragaria vesca HOM05D001695 ORTHO05D002735 9.4e-13 77.4 108 45.4
Phvul.001G155600 Phaseolus vulgaris HOM05D001695 ORTHO05D002735 9.4e-13 77.4 97 47.4
Eucgr.K03319 Eucalyptus grandis HOM05D001695 ORTHO05D002735 1.2e-12 77.0 122 42.6
Glyma.03G158000 Glycine max HOM05D001695 ORTHO05D002735 1.2e-12 77.0 104 47.1
MSTRG.18276 Avicennia marina HOM05D001695 ORTHO05D002735 1.6e-12 76.6 85 49.4
Cc01_g18940 Coffea canephora HOM05D001695 ORTHO05D002735 1.6e-12 76.6 104 45.2
FAN24G2593 Fragaria x ananassa HOM05D001695 ORTHO05D002735 1.6e-12 76.6 108 45.4
Actinidia09097 Actinidia chinensis HOM05D001695 ORTHO05D002735 2.1e-12 76.3 72 51.4
Ciclev10023937m.g Citrus clementina HOM05D001695 ORTHO05D002735 2.1e-12 76.3 113 38.9
Glyma.19G160300 Glycine max HOM05D001695 ORTHO05D002735 2.1e-12 76.3 71 57.7
Dinv34556 Davidia involucrata HOM05D001695 ORTHO05D002735 2.7e-12 75.9 89 46.1
PSO121G0001 Papaver somniferum HOM05D001695 ORTHO05D002735 2.7e-12 75.9 124 38.7
PSO210G5739 Papaver somniferum HOM05D001695 ORTHO05D002735 2.7e-12 75.9 124 38.7
PSO210G5800 Papaver somniferum HOM05D001695 ORTHO05D002735 2.7e-12 75.9 124 38.7
DCAR_018439 Daucus carota HOM05D001695 ORTHO05D002735 3.6e-12 75.5 91 47.3
arahy.Tifrunner.gnm1.ann1.S9HU1U Arachis hypogaea HOM05D001695 ORTHO05D002735 4.7e-12 75.1 135 40.0
RcHm_v2.0_Chr6g0289711 Rosa chinensis HOM05D001695 ORTHO05D002735 4.7e-12 75.1 108 43.5
MELO3C014318.2 Cucumis melo HOM05D001695 ORTHO05D002735 6.1e-12 74.7 82 47.6
Medtr7g095920 Medicago truncatula HOM05D001695 ORTHO05D002735 6.1e-12 74.7 72 50.0
TWI12G0096 Tripterygium wilfordii HOM05D001695 ORTHO05D002735 6.1e-12 74.7 108 43.5
Atru.chr3.758 Acer truncatum HOM05D001695 ORTHO05D002735 7.9e-12 74.3 73 52.1
Lalb_Chr21g0306321 Lupinus albus HOM05D001695 ORTHO05D002735 7.9e-12 74.3 114 43.0
VMungo1383G2569 Vigna mungo HOM05D001695 ORTHO05D002735 7.9e-12 74.3 71 54.9
ClCG07G000550 Citrullus lanatus HOM05D001695 ORTHO05D002735 1.0e-11 73.9 103 43.7
Migut.D00346 Erythranthe guttata HOM05D001695 ORTHO05D002735 1.0e-11 73.9 76 52.6
COL.COLO4_06098 Corchorus olitorius HOM05D001695 ORTHO05D002735 1.4e-11 73.6 104 44.2
Manes.05G082900 Manihot esculenta HOM05D001695 ORTHO05D002735 1.4e-11 73.6 72 51.4
arahy.Tifrunner.gnm1.ann1.Z2VWUQ Arachis hypogaea HOM05D001695 ORTHO05D002735 1.8e-11 73.2 135 39.3
Oeu025777.1 Olea europaea HOM05D001695 ORTHO05D002735 1.8e-11 73.2 136 39.0
CsaV3_2G013780 Cucumis sativus L. HOM05D001695 ORTHO05D002735 2.3e-11 72.8 111 40.5
QL12p042507 Quercus lobata HOM05D001695 ORTHO05D002735 3.9e-11 72.0 122 41.8
Thecc.01G269300 Theobroma cacao HOM05D001695 ORTHO05D002735 3.9e-11 72.0 69 55.1
MSTRG.21518 Avicennia marina HOM05D001695 ORTHO05D002735 5.1e-11 71.6 131 38.2
DCAR_012509 Daucus carota HOM05D001695 ORTHO05D002735 5.1e-11 71.6 107 43.9
Gohir.A07G208000 Gossypium hirsutum HOM05D001695 ORTHO05D002735 5.1e-11 71.6 72 52.8
arahy.Tifrunner.gnm1.ann1.Q3JBH6 Arachis hypogaea HOM05D001695 ORTHO05D002735 1.5e-10 70.1 71 50.7
TPR.G19108 Trifolium pratense HOM05D001695 ORTHO05D002735 1.5e-10 70.1 93 41.9
Cpa.g.sc1247.1 Carica papaya HOM05D001695 ORTHO05D002735 2.0e-10 69.7 72 48.6
Gohir.D07G214000 Gossypium hirsutum HOM05D001695 ORTHO05D002735 3.3e-10 68.9 71 50.7
Gorai.001G242000 Gossypium raimondii HOM05D001695 ORTHO05D002735 3.3e-10 68.9 71 50.7
PGR044G2111 Punica granatum HOM05D001695 ORTHO05D002735 3.3e-10 68.9 82 46.3
Lalb_Chr01g0019951 Lupinus albus HOM05D001695 ORTHO05D002735 4.4e-10 68.6 126 39.7
Glyma.02G143300 Glycine max HOM05D001695 ORTHO05D002735 5.7e-10 68.2 83 45.8
Sed0027528 Sechium edule HOM05D001695 ORTHO05D002735 5.7e-10 68.2 72 48.6
Glyma.10G031100 Glycine max HOM05D001695 ORTHO05D002735 3.7e-09 65.5 72 45.8
Sed0003781 Sechium edule HOM05D001695 ORTHO05D002735 6.3e-09 64.7 72 45.8
ECA236G1508 Erigeron canadensis HOM05D001695 ORTHO05D002735 1.1e-08 63.9 103 38.8
HanXRQChr13g0419591 Helianthus annuus HOM05D001695 ORTHO05D002735 1.1e-08 63.9 65 47.7
MBI11_g26137_MAGBIO Magnolia biondii HOM05D001695 ORTHO05D002735 1.1e-08 63.9 67 46.3
SalBow4G0856 Salvia bowleyana HOM05D001695 ORTHO05D002735 1.1e-08 63.9 115 39.1
Zm00001eb114700 Zea mays HOM05D001695 ORTHO05D002735 1.8e-08 63.2 124 35.5
Nitab4.5_0000187g0060 Nicotiana tabacum HOM05D001695 ORTHO05D002735 2.4e-08 62.8 83 43.4
Haze_24517 Corylus avellana HOM05D001695 ORTHO05D002735 4.1e-08 62.0 83 41.0
VMungo0720G1092 Vigna mungo HOM05D001695 ORTHO05D002735 4.1e-08 62.0 106 36.8
Phvul.007G175900 Phaseolus vulgaris HOM05D001695 ORTHO05D002735 5.3e-08 61.6 72 44.4
Zm00001eb114610 Zea mays HOM05D001695 ORTHO05D002735 5.3e-08 61.6 115 33.0
arahy.Tifrunner.gnm1.ann1.PL7EZQ Arachis hypogaea HOM05D001695 ORTHO05D002735 9.1e-08 60.8 87 41.4
CSS0034323 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 9.1e-08 60.8 87 41.4
CSS0037037 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 9.1e-08 60.8 87 41.4
CSS0041504 Camellia sinensis var. sinensis HOM05D001695 ORTHO05D002735 1.2e-07 60.5 102 39.2
Sc05g0001110 Simmondsia chinensis HOM05D001695 ORTHO05D002735 1.5e-07 60.1 129 32.6
ECA247G0338 Erigeron canadensis HOM05D001695 ORTHO05D002735 7.7e-07 57.8 78 38.5
Potri.005G216400 Populus trichocarpa HOM05D001695 ORTHO05D002735 3.8e-06 55.5 112 34.8
THA.LOC104801253 Tarenaya hassleriana HOM05D001695 ORTHO05D002735 3.8e-06 55.5 102 35.3
Aa31LG1G9480 Aethionema arabicum HOM05D001695 ORTHO05D002735 8.5e-06 54.3 92 38.0


User provided reference genes

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