Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 2.2e-233 812.8 731 100.0
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 1.7e-172 610.5 731 85.8
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 4.9e-84 316.6 670 72.8
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 3.4e-53 214.2 699 64.2
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 6.1e-50 203.4 685 65.0
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 6.7e-41 173.3 690 61.7
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 5.7e-40 170.2 654 65.4
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 5.3e-38 163.7 181 45.3
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.0e-37 161.8 314 58.0
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 4.5e-37 160.6 249 39.8
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 5.9e-37 160.2 178 48.3
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 1.3e-36 159.1 685 62.9
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 1.7e-36 158.7 209 44.0
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 2.2e-36 158.3 196 45.4
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 1.5e-35 155.6 209 43.1
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 3.2e-35 154.5 693 58.6
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 4.2e-35 154.1 657 64.4
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 5.5e-35 153.7 670 58.5
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 1.6e-34 152.1 173 44.5
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 6.1e-34 150.2 121 61.2
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 1.0e-33 149.4 651 64.7
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 1.4e-33 149.1 235 39.6
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 9.8e-32 142.9 226 40.3
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.4e-30 139.0 160 41.9
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.5e-29 134.4 150 43.3
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 3.5e-29 134.4 109 57.8
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 2.3e-28 131.7 690 62.0
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 2.3e-28 131.7 261 34.5
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 2.9e-28 131.3 164 43.9
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 2.9e-28 131.3 652 63.3
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 2.9e-28 131.3 153 45.1
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.9e-27 128.6 108 57.4
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 5.5e-27 127.1 155 45.2
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 5.5e-27 127.1 141 46.1
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 9.5e-27 126.3 141 47.5
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 1.2e-26 125.9 686 60.9
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 1.2e-26 125.9 92 62.0
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 1.6e-26 125.6 152 46.1
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 2.1e-26 125.2 162 46.9
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 2.8e-26 124.8 170 44.7
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 2.8e-26 124.8 205 37.6
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 3.6e-26 124.4 92 64.1
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 3.6e-26 124.4 193 42.5
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 4.7e-26 124.0 155 46.5
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 4.7e-26 124.0 666 62.5
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 4.7e-26 124.0 191 42.4
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 6.1e-26 123.6 147 49.7
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.0e-25 122.9 611 66.3
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 1.0e-25 122.9 165 43.0
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 1.8e-25 122.1 186 38.2
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 2.3e-25 121.7 201 40.8
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 5.2e-25 120.6 141 49.6
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 5.2e-25 120.6 92 63.0
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 6.8e-25 120.2 180 41.1
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 6.8e-25 120.2 180 41.1
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 8.9e-25 119.8 156 42.9
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 8.9e-25 119.8 677 60.9
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 3.4e-24 117.9 179 40.2
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 3.4e-24 117.9 179 40.2
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 3.4e-24 117.9 701 59.8
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 4.4e-24 117.5 140 47.9
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 5.7e-24 117.1 177 42.4
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 7.5e-24 116.7 129 46.5
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 9.8e-24 116.3 179 38.5
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 9.8e-24 116.3 180 39.4
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 9.8e-24 116.3 97 56.7
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 1.3e-23 115.9 161 41.6
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 1.7e-23 115.5 96 55.2
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 1.7e-23 115.5 97 58.8
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 2.2e-23 115.2 158 42.4
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 2.2e-23 115.2 172 39.5
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 2.2e-23 115.2 183 42.1
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 2.2e-23 115.2 147 46.3
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 2.2e-23 115.2 172 41.3
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 2.8e-23 114.8 116 50.9
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 3.7e-23 114.4 694 60.1
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 3.7e-23 114.4 141 46.1
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 4.9e-23 114.0 178 38.8
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 4.9e-23 114.0 178 38.8
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 4.9e-23 114.0 144 44.4
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 8.3e-23 113.2 152 42.8
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 8.3e-23 113.2 191 39.8
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 8.3e-23 113.2 191 39.8
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 8.3e-23 113.2 139 43.9
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 1.1e-22 112.8 201 36.3
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 1.4e-22 112.5 111 50.5
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 1.4e-22 112.5 171 39.2
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 1.4e-22 112.5 171 39.2
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 1.8e-22 112.1 109 50.5
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 1.8e-22 112.1 120 50.0
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 2.4e-22 111.7 137 46.0
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 2.4e-22 111.7 168 39.9
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 3.1e-22 111.3 179 37.4
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 4.1e-22 110.9 174 39.1
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 1.6e-21 109.0 109 48.6
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 3.5e-21 107.8 124 46.8
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 3.5e-21 107.8 196 38.8
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 7.8e-21 106.7 134 46.3
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 2.9e-20 104.8 87 57.5
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 3.8e-20 104.4 156 38.5
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 5.0e-20 104.0 142 39.4
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 1.1e-19 102.8 118 49.2
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 3.3e-19 101.3 113 50.4
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 5.6e-19 100.5 134 42.5
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 2.8e-18 98.2 166 34.3
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 3.6e-18 97.8 81 55.6
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 8.9e-17 93.2 78 56.4
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 3.2e-14 84.7 113 46.0
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 7.0e-14 83.6 104 37.5
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 1.6e-13 82.4 73 52.1
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 3.9e-12 77.8 88 47.7
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.6e-10 71.2 61 59.0
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 5.8e-08 63.9 67 46.3
VMungo1215G2034 Vigna mungo HOM05D003210 ORTHO05D000001 1.7e-07 62.4 208 23.1
TAR626G0090 Trochodendron aralioides HOM05D006842 ORTHO05D008908 6.4e-07 60.5 127 26.0
COL.COLO4_21653 Corchorus olitorius HOM05D000162 ORTHO05D000090 8.3e-07 60.1 140 27.1
Cc07_g09260 Coffea canephora HOM05D000891 ORTHO05D000761 1.4e-06 59.3 131 29.8
TWI81G0227 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 1.4e-06 59.3 141 23.4
PGSC0003DMG400040010 Solanum tuberosum HOM05D000891 ORTHO05D000761 2.4e-06 58.5 131 29.0
SGA_v2.0_scaffold223G42824 Striga asiatica HOM05D005337 ORTHO05D006567 3.2e-06 58.2 203 25.1
Nitab4.5_0000256g0090 Nicotiana tabacum HOM05D007893 ORTHO05D010042 4.1e-06 57.8 108 28.7
PGR142G4068 Punica granatum HOM05D005287 ORTHO05D006893 5.4e-06 57.4 238 23.1
Glyma.01G016100 Glycine max HOM05D007893 ORTHO05D010042 7.0e-06 57.0 89 29.2
Lj3C848G3 Lonicera japonica HOM05D007202 ORTHO05D009125 7.0e-06 57.0 189 28.0
Gorai.013G000300 Gossypium raimondii HOM05D007063 ORTHO05D008822 9.2e-06 56.6 147 24.5
Sopen12g014610 Solanum pennellii HOM05D002453 ORTHO05D002107 9.2e-06 56.6 100 27.0


User provided reference genes

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