Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5813 Papaver somniferum HOM05D003538 ORTHO05D004376 1.1e-303 1045.8 543 100.0
PSO210G6318 Papaver somniferum HOM05D003538 ORTHO05D004376 5.2e-288 993.8 544 95.8
TAR626G0286 Trochodendron aralioides HOM05D003538 ORTHO05D004376 1.5e-146 523.9 541 56.6
Nn6g35422 Nelumbo nucifera HOM05D003538 ORTHO05D004376 1.7e-129 467.2 548 50.2
MBI03_g13775_MAGBIO Magnolia biondii HOM05D003538 ORTHO05D004376 8.1e-124 448.4 534 51.1
Aqoxy7G04069 Aquilegia oxysepala HOM05D003538 ORTHO05D004376 1.4e-123 447.6 548 48.4
QL02p063126 Quercus lobata HOM05D003538 ORTHO05D004376 2.4e-115 420.2 533 47.1
Cfa003115 Carpinus fangiana HOM05D003538 ORTHO05D004376 6.4e-113 412.1 543 46.4
Dinv36743 Davidia involucrata HOM05D003538 ORTHO05D004376 5.1e-110 402.5 539 45.5
Prupe.7G213400 Prunus persica HOM05D003538 ORTHO05D004376 8.7e-110 401.7 553 43.6
Hma1.2p1_0798F.1_g219590 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 1.3e-108 397.9 540 45.9
Hma1.2p1_1074F.1_g254274 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 1.3e-108 397.9 540 45.9
GSVIVG01015234001 Vitis vinifera HOM05D003538 ORTHO05D004376 2.6e-106 390.2 530 44.0
Atru.chr7.1545 Acer truncatum HOM05D003538 ORTHO05D004376 1.6e-103 380.9 537 44.7
Actinidia29888 Actinidia chinensis HOM05D003538 ORTHO05D004376 4.6e-103 379.4 538 45.5
CiPaw.04G152000 Carya illinoinensis HOM05D003538 ORTHO05D004376 1.5e-101 374.4 539 43.0
CSS0008213 Camellia sinensis var. sinensis HOM05D003538 ORTHO05D004376 1.9e-101 374.0 546 42.9
Duzib168G2161 Durio zibethinus HOM05D003538 ORTHO05D004376 4.3e-101 372.9 558 44.8
MD02G1074500 Malus domestica HOM05D003538 ORTHO05D004376 7.3e-101 372.1 534 43.3
Atru.chr7.1041 Acer truncatum HOM05D003538 ORTHO05D004376 1.3e-100 371.3 540 43.7
QL02p001408 Quercus lobata HOM05D003538 ORTHO05D004376 8.1e-100 368.6 540 43.5
Ciclev10007935m.g Citrus clementina HOM05D003538 ORTHO05D004376 1.1e-99 368.2 537 40.8
Haze_25885 Corylus avellana HOM05D003538 ORTHO05D004376 3.1e-99 366.7 441 46.9
Rhsim03G0234300 Rhododendron simsii HOM05D003538 ORTHO05D004376 6.9e-99 365.5 534 43.6
Sed0013907 Sechium edule HOM05D003538 ORTHO05D004376 2.0e-98 364.0 539 41.0
Manes.03G031601 Manihot esculenta HOM05D003538 ORTHO05D004376 2.6e-98 363.6 530 40.6
COL.COLO4_21041 Corchorus olitorius HOM05D003538 ORTHO05D004376 4.5e-98 362.8 547 42.4
Actinidia01196 Actinidia chinensis HOM05D003538 ORTHO05D004376 5.5e-96 355.9 528 43.9
TWI34G1305 Tripterygium wilfordii HOM05D003538 ORTHO05D004376 1.6e-95 354.4 536 41.2
Gorai.009G045900 Gossypium raimondii HOM05D003538 ORTHO05D004376 2.1e-95 354.0 551 43.7
Eucgr.C03664 Eucalyptus grandis HOM05D003538 ORTHO05D004376 4.6e-95 352.8 456 42.1
ClCG03G015790 Citrullus lanatus HOM05D003538 ORTHO05D004376 6.0e-95 352.4 534 40.6
Actinidia30305 Actinidia chinensis HOM05D003538 ORTHO05D004376 3.0e-94 350.1 526 43.7
PGSC0003DMG400008432 Solanum tuberosum HOM05D003538 ORTHO05D004376 6.7e-94 349.0 539 41.0
Gohir.A05G043100 Gossypium hirsutum HOM05D003538 ORTHO05D004376 1.1e-93 348.2 550 43.1
TWI32G0386 Tripterygium wilfordii HOM05D003538 ORTHO05D004376 2.5e-93 347.1 507 42.2
CSS0001901 Camellia sinensis var. sinensis HOM05D003538 ORTHO05D004376 3.3e-93 346.7 530 41.9
Ciclev10007991m.g Citrus clementina HOM05D003538 ORTHO05D004376 7.4e-93 345.5 534 42.7
Thecc.09G092900 Theobroma cacao HOM05D003538 ORTHO05D004376 1.3e-92 344.7 535 40.9
Sopen07g015920 Solanum pennellii HOM05D003538 ORTHO05D004376 2.1e-92 344.0 546 40.1
Glyma.07G128300 Glycine max HOM05D003538 ORTHO05D004376 1.4e-91 341.3 532 41.7
Lj7A672T62 Lonicera japonica HOM05D003538 ORTHO05D004376 3.1e-91 340.1 474 44.3
Glyma.01G003600 Glycine max HOM05D003538 ORTHO05D004376 9.0e-91 338.6 529 41.0
HanXRQChr02g0044571 Helianthus annuus HOM05D003538 ORTHO05D004376 9.0e-91 338.6 549 40.6
VMungo0464G1250 Vigna mungo HOM05D003538 ORTHO05D004376 1.5e-90 337.8 529 40.5
CANSAT25G2654 Cannabis sativa HOM05D003538 ORTHO05D004376 2.0e-90 337.4 537 41.7
Rhsim11G0045200 Rhododendron simsii HOM05D003538 ORTHO05D004376 2.0e-90 337.4 517 42.6
Potri.006G230900 Populus trichocarpa HOM05D003538 ORTHO05D004376 1.3e-89 334.7 525 43.4
Manes.03G034901 Manihot esculenta HOM05D003538 ORTHO05D004376 2.9e-89 333.6 538 38.3
Medtr6g091790 Medicago truncatula HOM05D003538 ORTHO05D004376 2.9e-89 333.6 536 41.2
MELO3C015449.2 Cucumis melo HOM05D003538 ORTHO05D004376 8.4e-89 332.0 463 42.3
Phvul.004G172000 Phaseolus vulgaris HOM05D003538 ORTHO05D004376 1.9e-88 330.9 530 41.1
Duzib168G1022 Durio zibethinus HOM05D003538 ORTHO05D004376 1.2e-87 328.2 491 42.6
Lsat_1_v5_gn_8_87540 Lactuca sativa HOM05D003538 ORTHO05D004376 2.7e-87 327.0 509 38.9
RcHm_v2.0_Chr2g0092961 Rosa chinensis HOM05D003538 ORTHO05D004376 3.5e-87 326.6 477 43.8
Gohir.D07G010500 Gossypium hirsutum HOM05D003538 ORTHO05D004376 6.0e-87 325.9 549 39.7
Hma1.2p1_0482F.1_g162640 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 1.0e-86 325.1 528 41.9
CsaV3_1G040220 Cucumis sativus L. HOM05D003538 ORTHO05D004376 3.0e-86 323.6 545 38.5
Lj7C279G1 Lonicera japonica HOM05D003538 ORTHO05D004376 3.9e-86 323.2 496 40.9
HPP92_009156 Vanilla planifolia HOM05D003538 ORTHO05D004376 3.9e-86 323.2 537 39.3
Lj5g0027111 Lotus japonicus HOM05D003538 ORTHO05D004376 5.1e-86 322.8 510 41.2
SalBow1G0256 Salvia bowleyana HOM05D003538 ORTHO05D004376 5.1e-86 322.8 533 40.0
arahy.Tifrunner.gnm1.ann1.60DKDN Arachis hypogaea HOM05D003538 ORTHO05D004376 1.1e-85 321.6 532 38.3
arahy.Tifrunner.gnm1.ann1.X6QCD5 Arachis hypogaea HOM05D003538 ORTHO05D004376 1.5e-85 321.2 532 38.5
Gorai.001G010900 Gossypium raimondii HOM05D003538 ORTHO05D004376 1.9e-85 320.9 548 39.1
CANSAT56G3152 Cannabis sativa HOM05D003538 ORTHO05D004376 7.4e-85 318.9 498 41.0
PGR044G1201 Punica granatum HOM05D003538 ORTHO05D004376 1.3e-84 318.2 499 39.7
Eucgr.C03022 Eucalyptus grandis HOM05D003538 ORTHO05D004376 1.6e-84 317.8 534 39.0
Cc06_g11090 Coffea canephora HOM05D003538 ORTHO05D004376 2.1e-84 317.4 537 38.7
Lj2g0016122 Lotus japonicus HOM05D003538 ORTHO05D004376 4.8e-84 316.2 530 39.2
CDE02G0844 Ceratophyllum demersum HOM05D003538 ORTHO05D004376 1.1e-83 315.1 479 43.6
CsaV3_UNG062480 Cucumis sativus L. HOM05D003538 ORTHO05D004376 6.9e-83 312.4 571 37.0
Sc23g0005570 Simmondsia chinensis HOM05D003538 ORTHO05D004376 5.9e-82 309.3 393 45.3
FvH4_1g07060 Fragaria vesca HOM05D003538 ORTHO05D004376 2.2e-81 307.4 503 39.4
FAN26G3060 Fragaria x ananassa HOM05D003538 ORTHO05D004376 3.8e-81 306.6 489 38.9
MSTRG.26404 Avicennia marina HOM05D003538 ORTHO05D004376 6.5e-81 305.8 534 36.9
Phvul.001G034000 Phaseolus vulgaris HOM05D003538 ORTHO05D004376 6.5e-81 305.8 487 40.7
Glyma.17G230200 Glycine max HOM05D003538 ORTHO05D004376 3.2e-80 303.5 506 40.5
VMungo0647G0716 Vigna mungo HOM05D003538 ORTHO05D004376 4.2e-80 303.1 517 39.7
Lalb_Chr24g0393871 Lupinus albus HOM05D003538 ORTHO05D004376 7.2e-80 302.4 531 37.9
Gohir.D05G044800 Gossypium hirsutum HOM05D003538 ORTHO05D004376 1.2e-79 301.6 409 47.2
CiPaw.16G029300 Carya illinoinensis HOM05D003538 ORTHO05D004376 2.1e-79 300.8 525 39.2
FAN19G1852 Fragaria x ananassa HOM05D003538 ORTHO05D004376 2.7e-79 300.4 503 39.0
Thecc.09G052400 Theobroma cacao HOM05D003538 ORTHO05D004376 3.5e-79 300.1 384 46.9
Lalb_Chr22g0356041 Lupinus albus HOM05D003538 ORTHO05D004376 1.1e-77 295.0 493 38.5
Glyma.14G093500 Glycine max HOM05D003538 ORTHO05D004376 5.7e-77 292.7 504 38.7
Sabra06G0179100 Salix brachista HOM05D003538 ORTHO05D004376 5.7e-77 292.7 558 39.8
TPR.G13110 Trifolium pratense HOM05D003538 ORTHO05D004376 2.8e-76 290.4 520 38.3
FAN23G1479 Fragaria x ananassa HOM05D003538 ORTHO05D004376 8.2e-76 288.9 478 37.9
AUR62009165 Chenopodium quinoa HOM05D003538 ORTHO05D004376 1.8e-75 287.7 523 39.2
Medtr1g016740 Medicago truncatula HOM05D003538 ORTHO05D004376 5.3e-75 286.2 540 36.1
Hund03347 Selenicereus undatus HOM05D003538 ORTHO05D004376 6.9e-75 285.8 523 39.0
AUR62022058 Chenopodium quinoa HOM05D003538 ORTHO05D004376 1.5e-74 284.6 523 39.2
AUR62043933 Chenopodium quinoa HOM05D003538 ORTHO05D004376 1.5e-74 284.6 523 39.2
Cc08_g10420 Coffea canephora HOM05D003538 ORTHO05D004376 2.0e-74 284.3 494 39.9
MELO3C016862.2 Cucumis melo HOM05D003538 ORTHO05D004376 5.9e-74 282.7 508 39.0
CsaV3_4G035550 Cucumis sativus L. HOM05D003538 ORTHO05D004376 7.7e-74 282.3 511 40.1
arahy.Tifrunner.gnm1.ann1.IE7M3R Arachis hypogaea HOM05D003538 ORTHO05D004376 2.2e-73 280.8 512 35.9
Gohir.A07G010200 Gossypium hirsutum HOM05D003538 ORTHO05D004376 8.5e-73 278.9 538 37.5
Sed0023083 Sechium edule HOM05D003538 ORTHO05D004376 1.1e-72 278.5 505 40.0
vmacro06276 Vaccinium macrocarpon HOM05D003538 ORTHO05D004376 1.9e-72 277.7 530 37.7
Manes.03G047000 Manihot esculenta HOM05D003538 ORTHO05D004376 4.2e-72 276.6 387 43.2
Nitab4.5_0001584g0040 Nicotiana tabacum HOM05D003538 ORTHO05D004376 2.1e-71 274.2 533 36.6
THA.LOC104814609 Tarenaya hassleriana HOM05D003538 ORTHO05D004376 2.7e-71 273.9 525 37.1
Aa31LG8G16630 Aethionema arabicum HOM05D003538 ORTHO05D004376 3.6e-71 273.5 536 35.3
Ca_13176_v3 Cicer arietinum L. HOM05D003538 ORTHO05D004376 6.1e-71 272.7 553 35.6
Medtr6g091900 Medicago truncatula HOM05D003538 ORTHO05D004376 7.9e-71 272.3 527 37.2
Peaxi162Scf00136g00059 Petunia axillaris HOM05D003538 ORTHO05D004376 1.8e-70 271.2 517 37.3
Zm00001eb161340 Zea mays HOM05D003538 ORTHO05D004376 1.8e-70 271.2 540 37.2
EL10Ac2g03914 Beta vulgaris HOM05D003538 ORTHO05D004376 6.7e-70 269.2 399 42.6
ECA236G1610 Erigeron canadensis HOM05D003538 ORTHO05D004376 1.5e-69 268.1 411 41.4
Nitab4.5_0001179g0130 Nicotiana tabacum HOM05D003538 ORTHO05D004376 2.5e-69 267.3 529 36.1
ClCG05G017780 Citrullus lanatus HOM05D003538 ORTHO05D004376 3.3e-69 266.9 524 38.2
Solyc08g065440.4 Solanum lycopersicum HOM05D003538 ORTHO05D004376 1.1e-67 261.9 515 36.7
Ah.11g044700 Amaranthus hybridus HOM05D003538 ORTHO05D004376 5.3e-67 259.6 519 34.9
Sopen08g019050 Solanum pennellii HOM05D003538 ORTHO05D004376 2.6e-66 257.3 515 36.5
vmacro00153 Vaccinium macrocarpon HOM05D003538 ORTHO05D004376 3.4e-66 256.9 477 36.1
MSTRG.11666 Avicennia marina HOM05D003538 ORTHO05D004376 1.9e-64 251.1 536 36.0
Migut.A00144 Erythranthe guttata HOM05D003538 ORTHO05D004376 1.6e-63 248.1 531 36.0
Haze_18202 Corylus avellana HOM05D003538 ORTHO05D004376 3.6e-63 246.9 578 34.6
arahy.Tifrunner.gnm1.ann1.QX44E6 Arachis hypogaea HOM05D003538 ORTHO05D004376 2.3e-62 244.2 580 32.4
Zm00001eb357710 Zea mays HOM05D003538 ORTHO05D004376 8.8e-62 242.3 541 34.9
Sed0020375 Sechium edule HOM05D003538 ORTHO05D004376 1.1e-61 241.9 432 40.0
CARHR201410 Cardamine hirsuta HOM05D003538 ORTHO05D004376 7.0e-59 232.6 496 35.3
Dinv27976 Davidia involucrata HOM05D003538 ORTHO05D004376 1.2e-58 231.9 279 49.8
PGSC0003DMG400002203 Solanum tuberosum HOM05D003538 ORTHO05D004376 1.2e-58 231.9 438 36.1
Aa31LG3G15420 Aethionema arabicum HOM05D003538 ORTHO05D004376 1.0e-57 228.8 499 33.3
unitig_699.g19305 Utricularia gibba HOM05D003538 ORTHO05D004376 1.7e-57 228.0 525 31.6
Lsat_1_v5_gn_3_24260 Lactuca sativa HOM05D003538 ORTHO05D004376 5.5e-56 223.0 449 36.1
Carub.0006s1031 Capsella rubella HOM05D003538 ORTHO05D004376 9.4e-56 222.2 524 33.8
Thhalv10013348m.g Eutrema salsugineum HOM05D003538 ORTHO05D004376 9.4e-56 222.2 522 33.7
HanXRQChr06g0173831 Helianthus annuus HOM05D003538 ORTHO05D004376 1.1e-53 215.3 435 35.4
AT5G11780 Arabidopsis thaliana HOM05D003538 ORTHO05D004376 1.5e-53 214.9 526 33.5
AL6G22530 Arabidopsis lyrata HOM05D003538 ORTHO05D004376 2.0e-53 214.5 525 32.8
Cpa.g.sc7.247 Carica papaya HOM05D003538 ORTHO05D004376 2.2e-52 211.1 281 46.6
Manes.03G031262 Manihot esculenta HOM05D003538 ORTHO05D004376 2.4e-51 207.6 350 38.6
SalBow4G1879 Salvia bowleyana HOM05D003538 ORTHO05D004376 3.1e-51 207.2 528 30.5
Sc18g0001860 Simmondsia chinensis HOM05D003538 ORTHO05D004376 7.0e-51 206.1 265 46.8
Manes.03G030833 Manihot esculenta HOM05D003538 ORTHO05D004376 1.2e-50 205.3 278 44.2
Manes.03G031366 Manihot esculenta HOM05D003538 ORTHO05D004376 4.5e-50 203.4 278 43.9
A10p25960 Brassica napus HOM05D003538 ORTHO05D004376 1.3e-49 201.8 504 33.5
BraA10t44658Z Brassica rapa HOM05D003538 ORTHO05D004376 2.2e-49 201.1 504 33.7
DCAR_011998 Daucus carota HOM05D003538 ORTHO05D004376 3.8e-49 200.3 291 41.6
BcaC04g19195 Brassica carinata HOM05D003538 ORTHO05D004376 1.1e-48 198.7 525 33.0
Os01g0600300 Oryza sativa ssp. japonica HOM05D003538 ORTHO05D004376 2.7e-47 194.1 303 39.6
Solyc07g032260.3 Solanum lycopersicum HOM05D003538 ORTHO05D004376 3.6e-47 193.7 268 42.5
BolC9t59332H Brassica oleracea HOM05D003538 ORTHO05D004376 8.0e-47 192.6 529 32.1
Hma1.2p1_0798F.1_g219600 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 1.0e-46 192.2 255 45.1
GSVIVG01035358001 Vitis vinifera HOM05D003538 ORTHO05D004376 6.8e-46 189.5 267 43.8
C09p65040 Brassica napus HOM05D003538 ORTHO05D004376 8.8e-46 189.1 527 32.1
FAN26G2436 Fragaria x ananassa HOM05D003538 ORTHO05D004376 6.5e-41 172.9 246 41.9
Medtr6g092160 Medicago truncatula HOM05D003538 ORTHO05D004376 5.5e-40 169.9 299 37.1
Oeu039611.1 Olea europaea HOM05D003538 ORTHO05D004376 1.8e-38 164.9 247 41.3
ATR0789G162 Amborella trichopoda HOM05D003538 ORTHO05D004376 1.3e-36 158.7 283 36.0
Sopen07g015930 Solanum pennellii HOM05D003538 ORTHO05D004376 3.1e-35 154.1 257 38.9
SEGI_33762 Sequoiadendron giganteum HOM05D003538 ORTHO05D004376 1.6e-34 151.8 591 27.9
Psat6g019320 Pisum sativum HOM05D003538 ORTHO05D004376 2.9e-33 147.5 497 27.8
ATR0789G133 Amborella trichopoda HOM05D003538 ORTHO05D004376 4.7e-31 140.2 257 38.9
ECA246G1935 Erigeron canadensis HOM05D003538 ORTHO05D004376 4.7e-31 140.2 256 36.7
Cpa.g.sc7.246 Carica papaya HOM05D003538 ORTHO05D004376 1.0e-30 139.0 258 36.4
SalBow4G0582 Salvia bowleyana HOM05D003538 ORTHO05D004376 5.2e-30 136.7 261 36.4
SGA_v2.0_scaffold734G53534 Striga asiatica HOM05D003538 ORTHO05D004376 2.4e-27 127.9 265 36.2
Oeu018651.1 Olea europaea HOM05D003538 ORTHO05D004376 1.7e-25 121.7 275 33.8
Eucgr.L03304 Eucalyptus grandis HOM05D003538 ORTHO05D004376 2.0e-21 108.2 237 33.3
Medtr6g092190 Medicago truncatula HOM05D003538 ORTHO05D004376 3.4e-21 107.5 257 32.7
DCAR_004434 Daucus carota HOM05D003538 ORTHO05D004376 1.9e-19 101.7 169 37.9
RcHm_v2.0_Chr4g0406051 Rosa chinensis HOM05D003538 ORTHO05D004376 2.0e-18 98.2 168 38.1
RcHm_v2.0_Chr4g0425381 Rosa chinensis HOM05D003538 ORTHO05D004376 6.6e-17 93.2 168 37.5
Thecc.06G128700 Theobroma cacao HOM05D003538 ORTHO05D004376 8.6e-17 92.8 140 44.3
SEGI_10797 Sequoiadendron giganteum HOM05D003538 ORTHO05D004376 2.5e-16 91.3 280 29.6
Pp3c10_12370 Physcomitrium patens HOM05D003538 ORTHO05D004376 5.6e-16 90.1 524 25.4
Oeu021470.1 Olea europaea HOM05D003538 ORTHO05D004376 4.7e-15 87.0 117 38.5
SGA_v2.0_scaffold187G40255 Striga asiatica HOM05D003538 ORTHO05D004376 3.1e-14 84.3 155 36.1
AagrBONN_evm.TU.Sc2ySwM_344.1097 Anthoceros agrestis HOM05D003538 ORTHO05D004376 1.5e-13 82.0 483 25.5
Lj7A278T10 Lonicera japonica HOM05D003538 ORTHO05D004376 1.3e-12 79.0 142 33.8
Sc18g0001870 Simmondsia chinensis HOM05D003538 ORTHO05D004376 2.2e-12 78.2 118 40.7
Mapoly0075s0033 Marchantia polymorpha HOM05D003538 ORTHO05D004376 2.3e-09 68.2 534 22.8
BcaC06g31881 Brassica carinata HOM05D000161 ORTHO05D000111 3.3e-08 64.3 177 30.5


User provided reference genes

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