Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5758 Papaver somniferum HOM05D005857 ORTHO05D007193 1.8e-33 145.2 68 100.0
PSO447G0367 Papaver somniferum HOM05D005857 ORTHO05D007193 3.1e-33 144.4 68 98.5
TAR628G1233 Trochodendron aralioides HOM05D005857 ORTHO05D007193 5.7e-27 123.6 71 83.1
TWI23G0165 Tripterygium wilfordii HOM05D005857 ORTHO05D007193 2.2e-26 121.7 73 80.8
Potri.004G229900 Populus trichocarpa HOM05D005857 ORTHO05D007193 1.4e-25 119.0 69 82.6
Aqoxy5G01841 Aquilegia oxysepala HOM05D005857 ORTHO05D007193 1.8e-25 118.6 73 78.1
DCAR_001733 Daucus carota HOM05D005857 ORTHO05D007193 3.1e-25 117.9 72 79.2
vmacro01623 Vaccinium macrocarpon HOM05D005857 ORTHO05D007193 7.0e-25 116.7 59 88.1
Migut.B00707 Erythranthe guttata HOM05D005857 ORTHO05D007193 1.2e-24 115.9 66 80.3
Thecc.06G020800 Theobroma cacao HOM05D005857 ORTHO05D007193 1.2e-24 115.9 69 78.3
Manes.14G164233 Manihot esculenta HOM05D005857 ORTHO05D007193 1.6e-24 115.5 72 76.4
SalBow1G1563 Salvia bowleyana HOM05D005857 ORTHO05D007193 2.0e-24 115.2 66 80.3
CSS0043387 Camellia sinensis var. sinensis HOM05D005857 ORTHO05D007193 2.6e-24 114.8 59 86.4
Cpa.g.sc34.126 Carica papaya HOM05D005857 ORTHO05D007193 2.6e-24 114.8 66 78.8
COL.COLO4_31107 Corchorus olitorius HOM05D005857 ORTHO05D007193 2.6e-24 114.8 72 75.0
SGA_v2.0_scaffold100G29556 Striga asiatica HOM05D001195 ORTHO05D001138 3.5e-24 114.4 72 77.8
Manes.06G013700 Manihot esculenta HOM05D005857 ORTHO05D007193 4.5e-24 114.0 72 76.4
TWI59G0768 Tripterygium wilfordii HOM05D005857 ORTHO05D007193 5.9e-24 113.6 73 76.7
CANSAT01G1822 Cannabis sativa HOM05D005857 ORTHO05D007193 1.0e-23 112.8 65 80.0
Oeu000158.1 Olea europaea HOM05D005857 ORTHO05D007193 1.3e-23 112.5 62 80.6
Gohir.A05G160000 Gossypium hirsutum HOM05D005857 ORTHO05D007193 1.7e-23 112.1 74 73.0
Gohir.D05G162700 Gossypium hirsutum HOM05D005857 ORTHO05D007193 1.7e-23 112.1 74 73.0
Gorai.009G167700 Gossypium raimondii HOM05D005857 ORTHO05D007193 1.7e-23 112.1 74 73.0
PGR042G3007 Punica granatum HOM05D005857 ORTHO05D007193 2.2e-23 111.7 73 74.0
CSS0006636 Camellia sinensis var. sinensis HOM05D005857 ORTHO05D007193 2.9e-23 111.3 59 84.7
MBI03_g21081_MAGBIO Magnolia biondii HOM05D005857 ORTHO05D007193 2.9e-23 111.3 53 94.3
Cc08_g11670 Coffea canephora HOM05D005857 ORTHO05D007193 3.8e-23 110.9 76 72.4
HanXRQChr11g0343801 Helianthus annuus HOM05D005857 ORTHO05D007193 3.8e-23 110.9 62 80.6
Lsat_1_v5_gn_9_83180 Lactuca sativa HOM05D005857 ORTHO05D007193 6.5e-23 110.2 64 78.1
CAN.G1379.7 Capsicum annuum HOM05D005857 ORTHO05D007193 8.5e-23 109.8 69 76.8
Duzib133G0295 Durio zibethinus HOM05D005857 ORTHO05D007193 1.5e-22 109.0 75 72.0
Oeu010607.1 Olea europaea HOM05D005857 ORTHO05D007193 1.9e-22 108.6 67 74.6
QL02p103650 Quercus lobata HOM05D005857 ORTHO05D007193 1.9e-22 108.6 63 77.8
RcHm_v2.0_Chr7g0218891 Rosa chinensis HOM05D005857 ORTHO05D007193 2.5e-22 108.2 69 75.4
Nitab4.5_0006159g0060 Nicotiana tabacum HOM05D005857 ORTHO05D007193 3.2e-22 107.8 72 73.6
Sed0006374 Sechium edule HOM05D005857 ORTHO05D007193 4.2e-22 107.5 64 75.0
Solyc01g102830.3 Solanum lycopersicum HOM05D005857 ORTHO05D007193 5.5e-22 107.1 72 72.2
Sopen01g045230 Solanum pennellii HOM05D005857 ORTHO05D007193 5.5e-22 107.1 72 72.2
PGSC0003DMG400018258 Solanum tuberosum HOM05D005857 ORTHO05D007193 5.5e-22 107.1 72 72.2
CiPaw.06G177300 Carya illinoinensis HOM05D005857 ORTHO05D007193 7.2e-22 106.7 64 71.9
Nitab4.5_0000521g0060 Nicotiana tabacum HOM05D005857 ORTHO05D007193 9.4e-22 106.3 72 69.4
CsaV3_5G027560 Cucumis sativus L. HOM05D005857 ORTHO05D007193 1.6e-21 105.5 65 72.3
FvH4_5g27520 Fragaria vesca HOM05D005857 ORTHO05D007193 1.6e-21 105.5 65 76.9
ATR1089G102 Amborella trichopoda HOM05D005857 ORTHO05D007193 2.1e-21 105.1 55 85.5
Sc03g0005520 Simmondsia chinensis HOM05D005857 ORTHO05D007193 2.1e-21 105.1 65 76.9
BcaB03g13096 Brassica carinata HOM05D005857 ORTHO05D007193 2.7e-21 104.8 66 72.7
ECA236G3879 Erigeron canadensis HOM05D005857 ORTHO05D007193 2.7e-21 104.8 68 73.5
Cfa004425 Carpinus fangiana HOM05D005857 ORTHO05D007193 4.7e-21 104.0 58 79.3
Haze_09965 Corylus avellana HOM05D005857 ORTHO05D007193 4.7e-21 104.0 58 79.3
Os02g0564200 Oryza sativa ssp. japonica HOM05D005857 ORTHO05D007193 6.1e-21 103.6 63 73.0
Prupe.1G586500 Prunus persica HOM05D005857 ORTHO05D007193 8.0e-21 103.2 61 77.0
Aa31LG2G7600 Aethionema arabicum HOM05D005857 ORTHO05D007193 1.0e-20 102.8 67 71.6
BcaC05g25348 Brassica carinata HOM05D005857 ORTHO05D007193 1.0e-20 102.8 66 71.2
A06p10470 Brassica napus HOM05D005857 ORTHO05D007193 1.0e-20 102.8 66 71.2
C05p12250 Brassica napus HOM05D005857 ORTHO05D007193 1.0e-20 102.8 66 71.2
BraA06t24227Z Brassica rapa HOM05D005857 ORTHO05D007193 1.0e-20 102.8 66 71.2
HanXRQChr10g0285581 Helianthus annuus HOM05D005857 ORTHO05D007193 1.0e-20 102.8 62 75.8
Zm00001eb244200 Zea mays HOM05D005857 ORTHO05D007193 1.0e-20 102.8 57 80.7
AL1G26340 Arabidopsis lyrata HOM05D005857 ORTHO05D007193 1.4e-20 102.4 65 72.3
AT1G14450 Arabidopsis thaliana HOM05D005857 ORTHO05D007193 1.4e-20 102.4 65 72.3
THA.LOC104801779 Tarenaya hassleriana HOM05D005857 ORTHO05D007193 1.4e-20 102.4 65 69.2
Peaxi162Scf00194g01021 Petunia axillaris HOM05D005857 ORTHO05D007193 1.8e-20 102.1 61 75.4
CiPaw.05G001000 Carya illinoinensis HOM05D005857 ORTHO05D007193 2.3e-20 101.7 64 70.3
C08p16740 Brassica napus HOM05D005857 ORTHO05D007193 3.0e-20 101.3 66 71.2
FAN04G0073 Fragaria x ananassa HOM05D005857 ORTHO05D007193 4.0e-20 100.9 67 70.1
Lalb_Chr12g0195891 Lupinus albus HOM05D005857 ORTHO05D007193 4.0e-20 100.9 59 78.0
Sp1g12820 Schrenkiella parvula HOM05D005857 ORTHO05D007193 5.2e-20 100.5 67 71.6
FAN18G0749 Fragaria x ananassa HOM05D005857 ORTHO05D007193 6.8e-20 100.1 67 70.1
SHI07423 Sapria himalayana HOM05D005857 ORTHO05D007193 6.8e-20 100.1 59 76.3
BcaB07g30330 Brassica carinata HOM05D005857 ORTHO05D007193 8.8e-20 99.8 63 73.0
C02p50660 Brassica napus HOM05D005857 ORTHO05D007193 8.8e-20 99.8 63 73.0
BolC2t11149H Brassica oleracea HOM05D005857 ORTHO05D007193 8.8e-20 99.8 63 73.0
BraA02t08316Z Brassica rapa HOM05D005857 ORTHO05D007193 8.8e-20 99.8 63 73.0
Carub.0005s0154 Capsella rubella HOM05D005857 ORTHO05D007193 8.8e-20 99.8 63 73.0
CARHR145070 Cardamine hirsuta HOM05D005857 ORTHO05D007193 8.8e-20 99.8 63 73.0
AUR62040136 Chenopodium quinoa HOM05D005857 ORTHO05D007193 1.2e-19 99.4 67 70.1
Thhalv10009257m.g Eutrema salsugineum HOM05D005857 ORTHO05D007193 1.2e-19 99.4 65 69.2
AT2G02510 Arabidopsis thaliana HOM05D005857 ORTHO05D007193 1.5e-19 99.0 63 71.4
CARHR014900 Cardamine hirsuta HOM05D005857 ORTHO05D007193 1.5e-19 99.0 67 67.2
THA.LOC104805131 Tarenaya hassleriana HOM05D005857 ORTHO05D007193 1.5e-19 99.0 67 68.7
BolC5t29979H Brassica oleracea HOM05D005857 ORTHO05D007193 2.0e-19 98.6 62 72.6
Glyma.17G002300 Glycine max HOM05D005857 ORTHO05D007193 2.0e-19 98.6 58 75.9
MD08G1249300 Malus domestica HOM05D005857 ORTHO05D007193 2.0e-19 98.6 57 77.2
MD15G1444100 Malus domestica HOM05D005857 ORTHO05D007193 2.0e-19 98.6 57 77.2
Aa31LG1G600 Aethionema arabicum HOM05D005857 ORTHO05D007193 2.6e-19 98.2 67 67.2
BcaC03g17146 Brassica carinata HOM05D005857 ORTHO05D007193 2.6e-19 98.2 62 72.6
AUR62032483 Chenopodium quinoa HOM05D005857 ORTHO05D007193 3.4e-19 97.8 67 70.1
Thhalv10005238m.g Eutrema salsugineum HOM05D005857 ORTHO05D007193 3.4e-19 97.8 62 71.0
FAN08G0400 Fragaria x ananassa HOM05D005857 ORTHO05D007193 7.5e-19 96.7 48 87.5
AL5G11780 Arabidopsis lyrata HOM05D005857 ORTHO05D007193 9.7e-19 96.3 63 68.3
BcaB08g34397 Brassica carinata HOM05D005857 ORTHO05D007193 1.3e-18 95.9 62 69.4
Carub.0001s1416 Capsella rubella HOM05D005857 ORTHO05D007193 1.3e-18 95.9 65 66.2
Medtr4g134550 Medicago truncatula HOM05D005857 ORTHO05D007193 1.3e-18 95.9 60 76.7
Sp2g13760 Schrenkiella parvula HOM05D005857 ORTHO05D007193 1.3e-18 95.9 62 69.4
Psat0s2555g0160 Pisum sativum HOM05D005857 ORTHO05D007193 1.7e-18 95.5 58 77.6
TPR.G6546 Trifolium pratense HOM05D005857 ORTHO05D007193 1.7e-18 95.5 58 79.3
Lj4g0009904 Lotus japonicus HOM05D005857 ORTHO05D007193 6.3e-18 93.6 60 73.3
Lsat_1_v5_gn_9_124880 Lactuca sativa HOM05D005857 ORTHO05D007193 8.3e-18 93.2 47 87.2
Ca_13524_v3 Cicer arietinum L. HOM05D005857 ORTHO05D007193 1.1e-17 92.8 54 77.8
MD11G1276400 Malus domestica HOM05D005857 ORTHO05D007193 1.8e-17 92.0 65 67.7
FAN13G1483 Fragaria x ananassa HOM05D005857 ORTHO05D007193 2.4e-17 91.7 57 75.4
Nitab4.5_0001085g0140 Nicotiana tabacum HOM05D005857 ORTHO05D007193 3.1e-17 91.3 62 66.1
Actinidia11730 Actinidia chinensis HOM05D005857 ORTHO05D007193 7.0e-17 90.1 46 87.0
Ciclev10003044m.g Citrus clementina HOM05D005857 ORTHO05D007193 1.2e-16 89.4 63 66.7
Ciclev10003046m.g Citrus clementina HOM05D005857 ORTHO05D007193 1.2e-16 89.4 63 66.7
Phvul.003G091000 Phaseolus vulgaris HOM05D005857 ORTHO05D007193 1.6e-16 89.0 60 68.3
Atru.chr6.134 Acer truncatum HOM05D005857 ORTHO05D007193 1.0e-15 86.3 61 63.9
Atru.chr6.187 Acer truncatum HOM05D005857 ORTHO05D007193 1.0e-15 86.3 61 63.9
Zm00001eb182520 Zea mays HOM05D005857 ORTHO05D007193 2.2e-15 85.1 66 59.1
Zm00001eb353890 Zea mays HOM05D005857 ORTHO05D007193 2.2e-15 85.1 54 74.1
Nitab4.5_0008987g0050 Nicotiana tabacum HOM05D005857 ORTHO05D007193 3.8e-15 84.3 54 70.4
BcaC07g41575 Brassica carinata HOM05D005857 ORTHO05D007193 8.5e-15 83.2 62 64.5
Psat4g149960 Pisum sativum HOM05D005857 ORTHO05D007193 1.5e-14 82.4 58 69.0
EL10Ac3g06399 Beta vulgaris HOM05D005857 ORTHO05D007193 4.2e-14 80.9 54 64.8
unitig_8.g2962 Utricularia gibba HOM05D005857 ORTHO05D007193 4.2e-14 80.9 47 74.5
Nitab4.5_0004030g0040 Nicotiana tabacum HOM05D005857 ORTHO05D007193 1.4e-12 75.9 54 61.1
A02p32930 Brassica napus HOM05D005857 ORTHO05D007193 3.0e-12 74.7 52 67.3
Zm00001eb203220 Zea mays HOM05D005857 ORTHO05D007193 3.0e-12 74.7 55 63.6
Zm00001eb203730 Zea mays HOM05D005857 ORTHO05D007193 1.2e-11 72.8 54 63.0
BolC8t49293H Brassica oleracea HOM05D005857 ORTHO05D007193 4.4e-11 70.9 37 81.1
Os07g0175750 Oryza sativa ssp. japonica HOM05D005857 ORTHO05D007193 4.8e-10 67.4 47 63.8
Pp3c9_5250 Physcomitrium patens HOM05D005857 ORTHO05D007193 1.1e-09 66.2 51 56.9
GSVIVG01023132001 Vitis vinifera HOM05D005857 ORTHO05D007193 1.2e-08 62.8 30 83.3
Nn3g18517 Nelumbo nucifera HOM05D005857 ORTHO05D007193 3.5e-08 61.2 43 76.7
Mapoly0052s0008 Marchantia polymorpha HOM05D005857 ORTHO05D007193 5.9e-08 60.5 39 69.2
Pp3c15_3960 Physcomitrium patens HOM05D005857 ORTHO05D007193 1.0e-07 59.7 48 54.2
Zm00001eb341140 Zea mays HOM05D005857 ORTHO05D007193 1.5e-06 55.8 54 57.4
Medtr2g036340 Medicago truncatula HOM05D005857 ORTHO05D007193 4.2e-06 54.3 60 48.3
Medtr8g046930 Medicago truncatula HOM05D005857 ORTHO05D007193 4.2e-06 54.3 60 48.3
AagrBONN_evm.TU.Sc2ySwM_369.408 Anthoceros agrestis HOM05D005857 ORTHO05D007193 7.2e-06 53.5 58 44.8


User provided reference genes

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