Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5559 Papaver somniferum HOM05D005048 ORTHO05D006420 7.3e-217 756.9 374 100.0
PSO210G2605 Papaver somniferum HOM05D005048 ORTHO05D006420 4.9e-205 717.6 399 91.0
Aqoxy5G01302 Aquilegia oxysepala HOM05D005048 ORTHO05D006420 1.7e-160 569.7 377 75.6
TAR383G0565 Trochodendron aralioides HOM05D005048 ORTHO05D006420 2.2e-160 569.3 376 74.7
Aqoxy1G00313 Aquilegia oxysepala HOM05D005048 ORTHO05D006420 2.2e-157 559.3 377 74.5
Nn2g11663 Nelumbo nucifera HOM05D005048 ORTHO05D006420 2.5e-156 555.8 376 72.9
Hma1.2p1_1151F.1_g261870 Hydrangea macrophylla HOM05D005048 ORTHO05D006420 3.7e-152 542.0 377 71.9
Actinidia32670 Actinidia chinensis HOM05D005048 ORTHO05D006420 3.1e-151 538.9 375 72.0
Ciclev10008139m.g Citrus clementina HOM05D005048 ORTHO05D006420 4.5e-150 535.0 377 71.6
CiPaw.04G161700 Carya illinoinensis HOM05D005048 ORTHO05D006420 1.3e-149 533.5 377 70.6
GSVIVG01015352001 Vitis vinifera HOM05D005048 ORTHO05D006420 1.7e-149 533.1 375 72.0
CSS0046369 Camellia sinensis var. sinensis HOM05D005048 ORTHO05D006420 1.5e-148 530.0 376 71.3
QL10p015858 Quercus lobata HOM05D005048 ORTHO05D006420 1.5e-148 530.0 376 71.0
Rhsim03G0239600 Rhododendron simsii HOM05D005048 ORTHO05D006420 1.9e-148 529.6 375 70.7
Haze_25781 Corylus avellana HOM05D005048 ORTHO05D006420 4.2e-148 528.5 376 70.7
ClCG05G003020 Citrullus lanatus HOM05D005048 ORTHO05D006420 1.6e-147 526.6 378 70.4
MBI01_g38807_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 4.7e-147 525.0 365 72.6
Thecc.09G106000 Theobroma cacao HOM05D005048 ORTHO05D006420 1.0e-146 523.9 377 69.5
Peaxi162Scf00231g00512 Petunia axillaris HOM05D005048 ORTHO05D006420 3.0e-146 522.3 376 69.4
PGSC0003DMG400018273 Solanum tuberosum HOM05D005048 ORTHO05D006420 6.7e-146 521.2 376 69.4
Cc01_g04910 Coffea canephora HOM05D005048 ORTHO05D006420 2.6e-145 519.2 380 68.7
Potri.017G118801 Populus trichocarpa HOM05D005048 ORTHO05D006420 7.5e-145 517.7 377 68.7
CsaV3_3G010630 Cucumis sativus L. HOM05D005048 ORTHO05D006420 2.8e-144 515.8 377 69.2
Sopen01g044930 Solanum pennellii HOM05D005048 ORTHO05D006420 2.8e-144 515.8 376 68.6
arahy.Tifrunner.gnm1.ann1.T6QICJ Arachis hypogaea HOM05D005048 ORTHO05D006420 4.8e-144 515.0 376 68.4
CAN.G1379.35 Capsicum annuum HOM05D005048 ORTHO05D006420 1.4e-143 513.5 376 68.4
MELO3C006282.2 Cucumis melo HOM05D005048 ORTHO05D006420 1.4e-143 513.5 378 69.0
arahy.Tifrunner.gnm1.ann1.TTP0Q7 Arachis hypogaea HOM05D005048 ORTHO05D006420 1.8e-143 513.1 376 68.1
Gorai.001G007100 Gossypium raimondii HOM05D005048 ORTHO05D006420 3.1e-143 512.3 377 68.2
Hund09223 Selenicereus undatus HOM05D005048 ORTHO05D006420 4.1e-143 511.9 376 68.9
Ca_17323_v3 Cicer arietinum L. HOM05D005048 ORTHO05D006420 5.3e-143 511.5 372 69.6
PGR102G2767 Punica granatum HOM05D005048 ORTHO05D006420 7.0e-143 511.1 374 69.0
Gohir.A07G004800 Gossypium hirsutum HOM05D005048 ORTHO05D006420 9.1e-143 510.8 377 67.9
Eucgr.C03804 Eucalyptus grandis HOM05D005048 ORTHO05D006420 1.6e-142 510.0 372 69.1
Lj4g0020985 Lotus japonicus HOM05D005048 ORTHO05D006420 1.6e-142 510.0 374 69.5
Glyma.05G229400 Glycine max HOM05D005048 ORTHO05D006420 2.0e-142 509.6 372 68.5
Glyma.14G218300 Glycine max HOM05D005048 ORTHO05D006420 2.0e-142 509.6 372 68.5
TPR.G23489 Trifolium pratense HOM05D005048 ORTHO05D006420 2.7e-142 509.2 373 68.6
Lalb_Chr05g0223041 Lupinus albus HOM05D005048 ORTHO05D006420 3.5e-142 508.8 375 68.3
ECA240G4205 Erigeron canadensis HOM05D005048 ORTHO05D006420 4.5e-142 508.4 373 67.8
Medtr8g103060 Medicago truncatula HOM05D005048 ORTHO05D006420 4.5e-142 508.4 373 70.0
Sabra17G0098100 Salix brachista HOM05D005048 ORTHO05D006420 4.5e-142 508.4 402 65.4
Gohir.D07G007400 Gossypium hirsutum HOM05D005048 ORTHO05D006420 1.7e-141 506.5 377 67.9
Prupe.7G225700 Prunus persica HOM05D005048 ORTHO05D006420 6.5e-141 504.6 376 66.5
HPP92_003926 Vanilla planifolia HOM05D005048 ORTHO05D006420 1.9e-140 503.1 380 66.3
VMungo0251G3001 Vigna mungo HOM05D005048 ORTHO05D006420 1.9e-140 503.1 372 68.5
Cfa003227 Carpinus fangiana HOM05D005048 ORTHO05D006420 2.5e-140 502.7 377 68.2
TWI81G0001 Tripterygium wilfordii HOM05D005048 ORTHO05D006420 5.5e-140 501.5 377 67.9
HanXRQChr03g0061391 Helianthus annuus HOM05D005048 ORTHO05D006420 7.2e-140 501.1 371 67.9
RcHm_v2.0_Chr2g0091251 Rosa chinensis HOM05D005048 ORTHO05D006420 7.2e-140 501.1 372 68.0
MD02G1057100 Malus domestica HOM05D005048 ORTHO05D006420 9.4e-140 500.7 376 66.5
TWI60G0019 Tripterygium wilfordii HOM05D005048 ORTHO05D006420 1.2e-139 500.4 377 67.6
Atru.chr7.1383 Acer truncatum HOM05D005048 ORTHO05D006420 3.6e-139 498.8 366 69.1
ATR0315G096 Amborella trichopoda HOM05D005048 ORTHO05D006420 4.7e-139 498.4 377 67.9
Lsat_1_v5_gn_7_41421 Lactuca sativa HOM05D005048 ORTHO05D006420 6.1e-139 498.0 372 66.7
COL.COLO4_37106 Corchorus olitorius HOM05D005048 ORTHO05D006420 8.0e-139 497.7 383 66.1
FvH4_1g05550 Fragaria vesca HOM05D005048 ORTHO05D006420 8.0e-139 497.7 372 67.2
FAN23G2083 Fragaria x ananassa HOM05D005048 ORTHO05D006420 1.4e-138 496.9 372 66.9
Cpa.g.sc23.64 Carica papaya HOM05D005048 ORTHO05D006420 3.0e-138 495.7 400 63.0
Migut.D01920 Erythranthe guttata HOM05D005048 ORTHO05D006420 2.6e-137 492.7 375 65.1
THA.LOC104799066 Tarenaya hassleriana HOM05D005048 ORTHO05D006420 3.4e-137 492.3 378 63.8
AL7G19480 Arabidopsis lyrata HOM05D005048 ORTHO05D006420 5.7e-137 491.5 378 64.8
FAN28G0981 Fragaria x ananassa HOM05D005048 ORTHO05D006420 1.7e-136 490.0 385 64.9
EL10Ac8g18435 Beta vulgaris HOM05D005048 ORTHO05D006420 2.8e-136 489.2 413 61.7
BcaB08g35458 Brassica carinata HOM05D005048 ORTHO05D006420 2.8e-136 489.2 375 65.3
Os02g0277600 Oryza sativa ssp. japonica HOM05D005048 ORTHO05D006420 4.8e-136 488.4 372 65.6
A10p08040 Brassica napus HOM05D005048 ORTHO05D006420 6.3e-136 488.0 378 65.1
Oeu026966.2 Olea europaea HOM05D005048 ORTHO05D006420 1.4e-135 486.9 376 64.4
C09p39250 Brassica napus HOM05D005048 ORTHO05D006420 3.1e-135 485.7 375 64.3
BolC9t56804H Brassica oleracea HOM05D005048 ORTHO05D006420 3.1e-135 485.7 375 64.3
Carub.0007s0821 Capsella rubella HOM05D005048 ORTHO05D006420 3.5e-134 482.3 379 63.1
BraSC35t45995Z Brassica rapa HOM05D005048 ORTHO05D006420 5.9e-134 481.5 378 64.0
Sp7g30130 Schrenkiella parvula HOM05D005048 ORTHO05D006420 1.1e-132 477.2 379 63.1
SalBow2G2764 Salvia bowleyana HOM05D005048 ORTHO05D006420 3.3e-132 475.7 380 65.0
Aa31LG2G18290 Aethionema arabicum HOM05D005048 ORTHO05D006420 4.2e-132 475.3 385 62.6
SGA_v2.0_scaffold58G20419 Striga asiatica HOM05D005048 ORTHO05D006420 4.2e-132 475.3 375 64.5
Duzib168G1040 Durio zibethinus HOM05D005048 ORTHO05D006420 1.6e-131 473.4 377 64.2
vmacro06232 Vaccinium macrocarpon HOM05D005048 ORTHO05D006420 1.6e-131 473.4 374 66.3
FAN19G2567 Fragaria x ananassa HOM05D005048 ORTHO05D006420 4.7e-131 471.9 372 65.1
Thhalv10013379m.g Eutrema salsugineum HOM05D005048 ORTHO05D006420 2.0e-129 466.5 382 61.8
AUR62021458 Chenopodium quinoa HOM05D005048 ORTHO05D006420 5.9e-126 454.9 376 62.2
unitig_0.g799 Utricularia gibba HOM05D005048 ORTHO05D006420 1.9e-124 449.9 379 61.2
Mapoly0125s0046 Marchantia polymorpha HOM05D005048 ORTHO05D006420 4.4e-121 438.7 376 58.8
Ah.14g082380 Amaranthus hybridus HOM05D005048 ORTHO05D006420 5.8e-121 438.3 377 61.0
BcaC04g20784 Brassica carinata HOM05D005048 ORTHO05D006420 1.7e-120 436.8 373 59.8
Nitab4.5_0004090g0040 Nicotiana tabacum HOM05D005048 ORTHO05D006420 1.4e-119 433.7 301 70.8
Nitab4.5_0000399g0090 Nicotiana tabacum HOM05D005048 ORTHO05D006420 1.3e-117 427.2 301 69.8
MD15G1191600 Malus domestica HOM05D005048 ORTHO05D006420 8.6e-117 424.5 330 64.8
Pp3c9_14820 Physcomitrium patens HOM05D005048 ORTHO05D006420 6.2e-115 418.3 378 60.6
FAN26G2936 Fragaria x ananassa HOM05D005048 ORTHO05D006420 1.9e-108 396.7 311 65.9
Dinv36669 Davidia involucrata HOM05D005048 ORTHO05D006420 4.3e-108 395.6 260 74.6
Zm00001eb203400 Zea mays HOM05D005048 ORTHO05D006420 9.5e-108 394.4 302 64.9
Zm00001eb203380 Zea mays HOM05D005048 ORTHO05D006420 1.2e-107 394.0 300 65.3
CBR_g50003 Chara braunii HOM05D005048 ORTHO05D006420 1.4e-106 390.6 377 52.8
SMO361G0652 Selaginella moellendorffii HOM05D005048 ORTHO05D006420 1.3e-104 384.0 374 54.0
CARHR240280 Cardamine hirsuta HOM05D005048 ORTHO05D006420 8.3e-104 381.3 317 61.8
Psat7g014800 Pisum sativum HOM05D005048 ORTHO05D006420 1.8e-98 363.6 254 72.0
MBI01_g29840_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 2.4e-98 363.2 357 59.1
AT4G32360 Arabidopsis thaliana HOM05D005048 ORTHO05D006420 1.9e-95 353.6 255 67.1
Solyc01g102490.3 Solanum lycopersicum HOM05D005048 ORTHO05D006420 5.4e-95 352.1 255 68.2
Sed0003567 Sechium edule HOM05D005048 ORTHO05D006420 1.8e-90 337.0 230 73.0
Sc08g0007680 Simmondsia chinensis HOM05D005048 ORTHO05D006420 3.8e-88 329.3 233 72.1
DCAR_009632 Daucus carota HOM05D005048 ORTHO05D006420 3.2e-87 326.2 231 71.0
Manes.14G158111 Manihot esculenta HOM05D005048 ORTHO05D006420 7.1e-87 325.1 231 71.4
Phvul.002G311600 Phaseolus vulgaris HOM05D005048 ORTHO05D006420 8.7e-85 318.2 231 70.1
Oeu035980.2 Olea europaea HOM05D005048 ORTHO05D006420 3.1e-82 309.7 403 47.6
Cre13.g562550 Chlamydomonas reinhardtii HOM05D005048 ORTHO05D006420 3.8e-80 302.8 400 45.0
MCO04G387 Micromonas commoda HOM05D005048 ORTHO05D006420 3.5e-78 296.2 393 44.3
CDE05G1289 Ceratophyllum demersum HOM05D005048 ORTHO05D006420 1.1e-76 291.2 257 58.0
Zm00001eb203390 Zea mays HOM05D005048 ORTHO05D006420 1.5e-76 290.8 233 63.5
SEGI_35536 Sequoiadendron giganteum HOM05D005048 ORTHO05D006420 3.4e-73 279.6 249 59.8
AagrBONN_evm.TU.Sc2ySwM_344.4229 Anthoceros agrestis HOM05D005048 ORTHO05D006420 1.7e-72 277.3 233 62.2
SHI02718 Sapria himalayana HOM05D005048 ORTHO05D006420 4.6e-70 269.2 209 64.1
Dinv41630 Davidia involucrata HOM05D005048 ORTHO05D006420 7.9e-62 241.9 143 82.5
FvH4_1g05561 Fragaria vesca HOM05D005048 ORTHO05D006420 4.1e-58 229.6 284 45.8
PRCOL_00004495 Prasinoderma coloniale HOM05D005048 ORTHO05D006420 4.1e-58 229.6 429 36.8
Haze_26375 Corylus avellana HOM05D005048 ORTHO05D006420 2.9e-56 223.4 383 38.4
Cfa027289 Carpinus fangiana HOM05D005048 ORTHO05D006420 4.2e-55 219.5 387 36.7
Lj7C657T3 Lonicera japonica HOM05D005048 ORTHO05D006420 5.1e-53 212.6 123 83.7
MBI01_g28841_MAGBIO Magnolia biondii HOM05D005048 ORTHO05D006420 1.4e-42 177.9 139 68.3
CDE05G1414 Ceratophyllum demersum HOM05D005048 ORTHO05D006420 7.2e-31 139.0 298 34.9
SGA_v2.0_scaffold29G12330 Striga asiatica HOM05D005048 ORTHO05D019217 1.2e-28 131.7 127 56.7
SHI02717 Sapria himalayana HOM05D005048 ORTHO05D012697 3.5e-25 120.2 152 43.4
Oeu035977.1 Olea europaea HOM05D005048 ORTHO05D006420 2.9e-24 117.1 140 50.0
CARHR240270 Cardamine hirsuta HOM05D005048 ORTHO05D006420 1.2e-22 111.7 61 75.4
AUR62010945 Chenopodium quinoa HOM05D005048 ORTHO05D006420 2.6e-20 104.0 61 75.4
FAN26G3268 Fragaria x ananassa HOM05D005048 ORTHO05D006420 5.7e-20 102.8 61 72.1
SEGI_20206 Sequoiadendron giganteum HOM05D005048 ORTHO05D006420 2.2e-19 100.9 109 50.5
FvH4_1g05600 Fragaria vesca HOM05D005048 ORTHO05D006420 4.1e-18 96.7 152 43.4
AUR62007677 Chenopodium quinoa HOM05D000716 ORTHO05D008300 1.2e-17 95.1 57 73.7
SEGI_37811 Sequoiadendron giganteum HOM05D005048 ORTHO05D012697 5.9e-17 92.8 125 41.6
Lj7C657T4 Lonicera japonica HOM05D005048 ORTHO05D006420 1.1e-15 88.6 75 60.0
SEGI_24932 Sequoiadendron giganteum HOM05D005048 ORTHO05D006420 7.2e-15 85.9 60 70.0
FAN28G0458 Fragaria x ananassa HOM05D005048 ORTHO05D006420 1.0e-13 82.0 78 51.3
SGA_v2.0_scaffold7G04123 Striga asiatica HOM05D005048 ORTHO05D006420 1.2e-12 78.6 77 57.1
FvH4_1g05551 Fragaria vesca HOM05D005048 ORTHO05D006420 8.3e-11 72.4 74 48.6
BraA03t10937Z Brassica rapa HOM05D005048 ORTHO05D028090 9.2e-10 68.9 100 40.0
Rhsim02G0216900 Rhododendron simsii HOM05D005048 ORTHO05D006420 9.2e-10 68.9 51 56.9
Cpa.g.sc12.33 Carica papaya HOM05D005048 ORTHO05D006420 1.9e-07 61.2 67 43.3
A03p16480 Brassica napus HOM05D005048 ORTHO05D028090 9.5e-07 58.9 104 38.5
C03p19370 Brassica napus HOM05D005048 ORTHO05D028090 4.7e-06 56.6 111 35.1
BolC3t14323H Brassica oleracea HOM05D005048 ORTHO05D028090 4.7e-06 56.6 111 35.1


User provided reference genes

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