Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5528 Papaver somniferum HOM05D010879 ORTHO05D010294 6.5e-103 377.5 201 100.0
PSO528G0157 Papaver somniferum HOM05D010879 ORTHO05D010294 1.4e-76 290.0 261 66.3
PSO782G4622 Papaver somniferum HOM05D010879 ORTHO05D010294 5.7e-59 231.5 269 54.3
PSO063G2271 Papaver somniferum HOM05D010879 ORTHO05D010294 1.6e-56 223.4 170 70.6
PSO210G4529 Papaver somniferum HOM05D010879 ORTHO05D010294 2.0e-56 223.0 169 71.0
PSO223G0075 Papaver somniferum HOM05D010879 ORTHO05D010294 2.0e-56 223.0 169 71.0
PSO339G0939 Papaver somniferum HOM05D010879 ORTHO05D010294 2.0e-56 223.0 169 71.0
PSO339G6517 Papaver somniferum HOM05D010879 ORTHO05D010294 2.0e-56 223.0 170 70.6
PSO384G2643 Papaver somniferum HOM05D010879 ORTHO05D010294 2.0e-56 223.0 169 71.0
PSO423G0281 Papaver somniferum HOM05D010879 ORTHO05D010294 2.0e-56 223.0 169 71.0
PSO675G4514 Papaver somniferum HOM05D010879 ORTHO05D010294 2.0e-56 223.0 170 70.6
PSO675G8923 Papaver somniferum HOM05D010879 ORTHO05D010294 2.0e-56 223.0 169 71.0
PSO724G0648 Papaver somniferum HOM05D010879 ORTHO05D010294 2.0e-56 223.0 169 71.0
PSO761G0148 Papaver somniferum HOM05D010879 ORTHO05D010294 2.0e-56 223.0 169 71.0
PSO781G0306 Papaver somniferum HOM05D010879 ORTHO05D010294 2.0e-56 223.0 169 71.0
PSO832G0405 Papaver somniferum HOM05D010879 ORTHO05D010294 2.0e-56 223.0 169 71.0
PSO832G1619 Papaver somniferum HOM05D010879 ORTHO05D010294 2.0e-56 223.0 169 71.0
PSO017G7209 Papaver somniferum HOM05D010879 ORTHO05D010294 3.5e-56 222.2 183 67.2
PSO675G7919 Papaver somniferum HOM05D010879 ORTHO05D010294 6.6e-39 164.9 125 64.8
HanXRQChr04g0119771 Helianthus annuus HOM05D008452 ORTHO05D010294 8.1e-13 78.2 106 40.6
Lsat_1_v5_gn_1_8180 Lactuca sativa HOM05D008452 ORTHO05D010294 1.1e-12 77.8 100 43.0
Lsat_1_v5_gn_3_84721 Lactuca sativa HOM05D008452 ORTHO05D010294 2.4e-12 76.6 140 35.0
Lsat_1_v5_gn_5_25601 Lactuca sativa HOM05D008452 ORTHO05D010294 4.0e-12 75.9 102 39.2
HanXRQChr01g0011531 Helianthus annuus HOM05D008452 ORTHO05D010294 1.5e-11 73.9 155 33.5
HanXRQChr05g0158771 Helianthus annuus HOM05D008452 ORTHO05D010294 1.5e-11 73.9 155 34.8
HanXRQChr13g0403321 Helianthus annuus HOM05D008452 ORTHO05D010294 1.5e-11 73.9 155 34.8
HanXRQChr11g0349201 Helianthus annuus HOM05D008452 ORTHO05D010294 4.5e-11 72.4 155 34.8
HanXRQChr17g0547341 Helianthus annuus HOM05D008452 ORTHO05D010294 4.5e-11 72.4 155 34.8
Lsat_1_v5_gn_8_10480 Lactuca sativa HOM05D008452 ORTHO05D010294 4.5e-11 72.4 207 32.4
HanXRQChr03g0077561 Helianthus annuus HOM05D008452 ORTHO05D010294 5.8e-11 72.0 155 34.8
Lsat_1_v5_gn_8_116720 Lactuca sativa HOM05D008452 ORTHO05D010294 1.3e-10 70.9 143 34.3
HanXRQChr10g0300491 Helianthus annuus HOM05D008452 ORTHO05D010294 1.9e-09 67.0 97 39.2
Lsat_1_v5_gn_9_89720 Lactuca sativa HOM05D008452 ORTHO05D010294 5.4e-09 65.5 69 49.3
HanXRQChr13g0402781 Helianthus annuus HOM05D008452 ORTHO05D010294 7.1e-09 65.1 117 36.8
RcHm_v2.0_Chr2g0160781 Rosa chinensis HOM05D000539 ORTHO05D010294 7.1e-09 65.1 80 42.5
RcHm_v2.0_Chr1g0316591 Rosa chinensis HOM05D000539 ORTHO05D000592 9.3e-09 64.7 86 41.9
HanXRQChr09g0243031 Helianthus annuus HOM05D008452 ORTHO05D010294 2.1e-08 63.5 117 36.8
HanXRQChr09g0253301 Helianthus annuus HOM05D008452 ORTHO05D010294 2.1e-08 63.5 117 36.8
RcHm_v2.0_Chr7g0227321 Rosa chinensis HOM05D000539 ORTHO05D000233 2.1e-08 63.5 183 29.5
Lsat_1_v5_gn_9_54600 Lactuca sativa HOM05D008452 ORTHO05D010294 2.7e-08 63.2 119 34.5
RcHm_v2.0_Chr7g0211271 Rosa chinensis HOM05D000539 ORTHO05D000233 3.5e-08 62.8 159 32.1
FvH4_1g20121 Fragaria vesca HOM05D000539 ORTHO05D000233 7.9e-08 61.6 104 37.5
RcHm_v2.0_Chr2g0145261 Rosa chinensis HOM05D000539 ORTHO05D000233 7.9e-08 61.6 171 30.4
RcHm_v2.0_Chr3g0495531 Rosa chinensis HOM05D000539 ORTHO05D000592 7.9e-08 61.6 120 34.2
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.0e-07 61.2 78 42.3
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.3e-07 60.8 78 42.3
Hma1.2p1_0013F.1_g008410 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 3.9e-07 59.3 107 35.5
RcHm_v2.0_Chr7g0191841 Rosa chinensis HOM05D000539 ORTHO05D000233 3.9e-07 59.3 183 30.1
RcHm_v2.0_Chr3g0494841 Rosa chinensis HOM05D000539 ORTHO05D000592 5.1e-07 58.9 88 37.5
FvH4_3g18051 Fragaria vesca HOM05D000539 ORTHO05D000592 6.7e-07 58.5 82 40.2
FvH4_3g19213 Fragaria vesca HOM05D000539 ORTHO05D000233 6.7e-07 58.5 82 40.2
FvH4_3g31712 Fragaria vesca HOM05D000539 ORTHO05D000592 6.7e-07 58.5 82 40.2
FvH4_4g10091 Fragaria vesca HOM05D000539 ORTHO05D000592 8.7e-07 58.2 82 39.0
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 8.7e-07 58.2 88 34.1
RcHm_v2.0_Chr3g0485221 Rosa chinensis HOM05D000539 ORTHO05D000233 8.7e-07 58.2 88 34.1
FvH4_7g02993 Fragaria vesca HOM05D000539 ORTHO05D000233 1.1e-06 57.8 82 40.2
FAN28G2002 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.1e-06 57.8 89 38.2
PSO700G0133 Papaver somniferum HOM05D010375 ORTHO05D015177 1.1e-06 57.8 69 37.7
RcHm_v2.0_Chr3g0460901 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-06 57.8 91 34.1
RcHm_v2.0_Chr4g0390571 Rosa chinensis HOM05D000539 ORTHO05D000592 1.1e-06 57.8 88 36.4
RcHm_v2.0_Chr4g0417051 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-06 57.8 182 29.7
RcHm_v2.0_Chr7g0201281 Rosa chinensis HOM05D000539 ORTHO05D000233 1.1e-06 57.8 98 34.7
FvH4_3g30441 Fragaria vesca HOM05D000539 ORTHO05D000592 1.5e-06 57.4 83 41.0
FAN14G2497 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.5e-06 57.4 82 39.0
FAN17G2822 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.5e-06 57.4 120 35.8
RcHm_v2.0_Chr7g0196691 Rosa chinensis HOM05D000539 ORTHO05D000233 1.5e-06 57.4 187 29.4
Ciclev10002181m.g Citrus clementina HOM05D000539 ORTHO05D000592 2.5e-06 56.6 78 46.2
Aqoxy6G01916 Aquilegia oxysepala HOM05D000539 ORTHO05D000233 3.3e-06 56.2 112 33.9
FvH4_6g23351 Fragaria vesca HOM05D000539 ORTHO05D000233 4.3e-06 55.8 82 37.8
FAN22G0150 Fragaria x ananassa HOM05D000539 ORTHO05D000592 4.3e-06 55.8 82 37.8
PSO717G0128 Papaver somniferum HOM05D010375 ORTHO05D015177 4.3e-06 55.8 69 37.7
PSO832G0348 Papaver somniferum HOM05D010375 ORTHO05D015177 4.3e-06 55.8 69 36.2
VMungo0251G2025 Vigna mungo HOM05D007793 ORTHO05D010104 4.3e-06 55.8 63 44.4
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 5.6e-06 55.5 77 40.3
FvH4_2g07146 Fragaria vesca HOM05D000539 ORTHO05D000233 7.4e-06 55.1 79 40.5
FvH4_5g20921 Fragaria vesca HOM05D000539 ORTHO05D000233 7.4e-06 55.1 105 37.1
FvH4_6g32742 Fragaria vesca HOM05D000539 ORTHO05D000233 7.4e-06 55.1 104 33.7
FAN02G3231 Fragaria x ananassa HOM05D000539 ORTHO05D000233 7.4e-06 55.1 76 42.1
FvH4_2g18191 Fragaria vesca HOM05D000539 ORTHO05D000233 9.6e-06 54.7 76 42.1
FvH4_6g23071 Fragaria vesca HOM05D000539 ORTHO05D000233 9.6e-06 54.7 87 39.1
FAN11G1109 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.6e-06 54.7 93 38.7
Hma1.2p1_0043F.1_g025950 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 9.6e-06 54.7 94 36.2
RcHm_v2.0_Chr5g0045831 Rosa chinensis HOM05D000539 ORTHO05D000592 9.6e-06 54.7 147 32.7


User provided reference genes

Program Settings