Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5515 Papaver somniferum HOM05D004016 ORTHO05D004732 1.1e-113 413.3 217 100.0
PSO761G0274 Papaver somniferum HOM05D004016 ORTHO05D004732 5.0e-109 397.9 217 92.2
Hma1.2p1_0667F.1_g199710 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 5.8e-33 145.2 223 49.3
Haze_04687 Corylus avellana HOM05D004016 ORTHO05D004732 6.5e-32 141.7 222 50.0
Dinv32914 Davidia involucrata HOM05D004016 ORTHO05D004732 6.5e-32 141.7 225 52.4
FAN15G1959 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.9e-31 140.2 224 46.0
FAN27G2694 Fragaria x ananassa HOM05D004016 ORTHO05D004732 5.5e-31 138.7 224 46.0
Lsat_1_v5_gn_8_56660 Lactuca sativa HOM05D004016 ORTHO05D004732 4.6e-30 135.6 233 45.9
FAN24G3262 Fragaria x ananassa HOM05D004016 ORTHO05D004732 6.0e-30 135.2 230 44.8
Cfa006163 Carpinus fangiana HOM05D004016 ORTHO05D004732 7.9e-30 134.8 224 47.8
FvH4_2g23281 Fragaria vesca HOM05D004016 ORTHO05D004732 1.3e-29 134.0 229 45.0
Lj2E1169T0 Lonicera japonica HOM05D004016 ORTHO05D004732 1.3e-29 134.0 223 48.9
TAR636G0684 Trochodendron aralioides HOM05D004016 ORTHO05D004732 3.0e-29 132.9 217 46.1
FAN20G3152 Fragaria x ananassa HOM05D004016 ORTHO05D004732 5.1e-29 132.1 228 43.9
RcHm_v2.0_Chr6g0290651 Rosa chinensis HOM05D004016 ORTHO05D004732 5.1e-29 132.1 237 42.6
MD03G1262100 Malus domestica HOM05D004016 ORTHO05D004732 1.5e-28 130.6 225 43.6
Psat3g063280 Pisum sativum HOM05D004016 ORTHO05D004732 1.5e-28 130.6 230 47.4
Phvul.007G173300 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 1.9e-28 130.2 218 44.5
Ciclev10022155m.g Citrus clementina HOM05D004016 ORTHO05D004732 3.3e-28 129.4 233 46.4
Eucgr.H01463 Eucalyptus grandis HOM05D004016 ORTHO05D004732 4.3e-28 129.0 217 44.2
MD11G1282800 Malus domestica HOM05D004016 ORTHO05D004732 4.3e-28 129.0 225 44.9
Ca_09744_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 9.6e-28 127.9 222 46.4
Actinidia21126 Actinidia chinensis HOM05D004016 ORTHO05D004732 6.3e-27 125.2 223 44.4
Hma1.2p1_0822F.1_g224340 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 6.3e-27 125.2 223 44.8
TWI18G0383 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 1.4e-26 124.0 226 43.8
Atru.chr5.1471 Acer truncatum HOM05D004016 ORTHO05D004732 4.1e-26 122.5 238 44.5
HanXRQChr04g0118991 Helianthus annuus HOM05D004016 ORTHO05D004732 5.3e-26 122.1 231 43.7
Ca_08613_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 9.0e-26 121.3 228 43.0
Manes.01G206100 Manihot esculenta HOM05D004016 ORTHO05D004732 9.0e-26 121.3 232 44.4
Sc05g0001440 Simmondsia chinensis HOM05D004016 ORTHO05D004732 1.2e-25 120.9 219 43.4
Cc01_g19290 Coffea canephora HOM05D004016 ORTHO05D004732 1.5e-25 120.6 231 42.4
Manes.05G079900 Manihot esculenta HOM05D004016 ORTHO05D004732 1.5e-25 120.6 231 42.0
Cpa.g.sc487.4 Carica papaya HOM05D004016 ORTHO05D004732 2.0e-25 120.2 227 43.6
Peaxi162Scf01248g00010 Petunia axillaris HOM05D004016 ORTHO05D004732 2.6e-25 119.8 219 45.2
MSTRG.18246 Avicennia marina HOM05D004016 ORTHO05D004732 3.4e-25 119.4 219 44.3
Glyma.02G146200 Glycine max HOM05D004016 ORTHO05D004732 4.5e-25 119.0 223 44.4
Migut.D00318 Erythranthe guttata HOM05D004016 ORTHO05D004732 7.6e-25 118.2 221 44.3
Sabra05G0161500 Salix brachista HOM05D004016 ORTHO05D004732 7.6e-25 118.2 230 42.2
Ah.02g110900 Amaranthus hybridus HOM05D004016 ORTHO05D004732 1.0e-24 117.9 222 41.0
Prupe.8G238400 Prunus persica HOM05D004016 ORTHO05D004732 1.0e-24 117.9 223 42.6
Glyma.10G027800 Glycine max HOM05D004016 ORTHO05D004732 1.7e-24 117.1 223 43.9
Gorai.004G078400 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.7e-24 117.1 226 44.7
Gohir.D08G074000 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.2e-24 116.7 226 44.7
Lj1g0004863 Lotus japonicus HOM05D004016 ORTHO05D004732 2.9e-24 116.3 225 42.7
LjContig00056g0010505 Lotus japonicus HOM05D004016 ORTHO05D004732 2.9e-24 116.3 225 42.7
Medtr7g095160 Medicago truncatula HOM05D004016 ORTHO05D004732 2.9e-24 116.3 218 44.0
Oeu028065.1 Olea europaea HOM05D004016 ORTHO05D004732 2.9e-24 116.3 238 40.3
COL.COLO4_09066 Corchorus olitorius HOM05D004016 ORTHO05D004732 3.8e-24 115.9 228 44.3
TAR633G2817 Trochodendron aralioides HOM05D004016 ORTHO05D004732 3.8e-24 115.9 219 46.6
VMungo0720G0880 Vigna mungo HOM05D004016 ORTHO05D004732 3.8e-24 115.9 198 43.4
ECA236G1435 Erigeron canadensis HOM05D004016 ORTHO05D004732 5.0e-24 115.5 227 41.0
Gohir.A08G065500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 5.0e-24 115.5 226 44.2
arahy.Tifrunner.gnm1.ann1.256EAD Arachis hypogaea HOM05D004016 ORTHO05D004732 6.5e-24 115.2 224 42.0
Lalb_Chr21g0306401 Lupinus albus HOM05D004016 ORTHO05D004732 8.5e-24 114.8 218 40.8
QL12p021105 Quercus lobata HOM05D004016 ORTHO05D004732 8.5e-24 114.8 239 40.2
Migut.N02038 Erythranthe guttata HOM05D004016 ORTHO05D004732 1.9e-23 113.6 220 42.3
Lj1C48T4 Lonicera japonica HOM05D004016 ORTHO05D004732 4.2e-23 112.5 226 43.8
Nitab4.5_0002928g0010 Nicotiana tabacum HOM05D004016 ORTHO05D004732 4.2e-23 112.5 217 42.9
EL10Ac5g10544 Beta vulgaris HOM05D004016 ORTHO05D004732 5.5e-23 112.1 225 42.2
MELO3C014394.2 Cucumis melo HOM05D004016 ORTHO05D004732 5.5e-23 112.1 217 41.9
CsaV3_6G037200 Cucumis sativus L. HOM05D004016 ORTHO05D004732 5.5e-23 112.1 216 41.7
Thecc.01G275600 Theobroma cacao HOM05D004016 ORTHO05D004732 5.5e-23 112.1 230 42.6
Duzib138G0182 Durio zibethinus HOM05D004016 ORTHO05D004732 7.2e-23 111.7 227 42.7
CAN.G1549.22 Capsicum annuum HOM05D004016 ORTHO05D004732 9.3e-23 111.3 220 40.5
Glyma.03G155700 Glycine max HOM05D004016 ORTHO05D004732 1.2e-22 110.9 219 44.3
Lalb_Chr02g0142631 Lupinus albus HOM05D004016 ORTHO05D004732 1.2e-22 110.9 217 41.5
Potri.005G211400 Populus trichocarpa HOM05D004016 ORTHO05D004732 1.2e-22 110.9 234 42.3
AUR62028601 Chenopodium quinoa HOM05D004016 ORTHO05D004732 1.6e-22 110.5 222 41.9
Lj5g0005099 Lotus japonicus HOM05D004016 ORTHO05D004732 1.6e-22 110.5 225 41.3
Rhsim01G0273500 Rhododendron simsii HOM05D004016 ORTHO05D004732 2.1e-22 110.2 218 43.6
vmacro14911 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 2.1e-22 110.2 219 42.0
CAN.G1549.11 Capsicum annuum HOM05D004016 ORTHO05D004732 2.7e-22 109.8 222 40.1
Phvul.001G153100 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 2.7e-22 109.8 216 43.5
Sc17g0001350 Simmondsia chinensis HOM05D004016 ORTHO05D004732 3.6e-22 109.4 215 40.0
TWI12G1445 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 3.6e-22 109.4 219 40.2
Lalb_Chr06g0162891 Lupinus albus HOM05D004016 ORTHO05D004732 4.6e-22 109.0 220 41.4
Aqoxy5G00450 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 6.1e-22 108.6 223 43.5
Duzib133G1129 Durio zibethinus HOM05D004016 ORTHO05D004732 6.1e-22 108.6 225 42.7
MSTRG.21548 Avicennia marina HOM05D004016 ORTHO05D004732 7.9e-22 108.2 227 42.3
Gohir.A08G186500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 7.9e-22 108.2 214 41.6
VMungo1383G1854 Vigna mungo HOM05D004016 ORTHO05D004732 7.9e-22 108.2 218 43.1
CiPaw.08G107200 Carya illinoinensis HOM05D004016 ORTHO05D004732 1.0e-21 107.8 196 44.4
Potri.002G050900 Populus trichocarpa HOM05D004016 ORTHO05D004732 1.0e-21 107.8 234 40.6
Hund02825 Selenicereus undatus HOM05D004016 ORTHO05D004732 2.3e-21 106.7 233 41.6
Sp6g02620 Schrenkiella parvula HOM05D004016 ORTHO05D004732 3.9e-21 105.9 222 40.1
CAN.G1549.21 Capsicum annuum HOM05D004016 ORTHO05D004732 5.1e-21 105.5 220 39.5
DCAR_002723 Daucus carota HOM05D004016 ORTHO05D004732 5.1e-21 105.5 232 40.1
Oeu040656.1 Olea europaea HOM05D004016 ORTHO05D004732 5.1e-21 105.5 218 41.7
Sed0007164 Sechium edule HOM05D004016 ORTHO05D004732 5.1e-21 105.5 223 39.9
Rhsim13G0026600 Rhododendron simsii HOM05D004016 ORTHO05D004732 6.7e-21 105.1 139 49.6
Glyma.19G157800 Glycine max HOM05D004016 ORTHO05D004732 8.7e-21 104.8 218 41.3
Oeu025739.1 Olea europaea HOM05D004016 ORTHO05D004732 8.7e-21 104.8 220 40.9
Solyc09g065380.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 1.1e-20 104.4 221 38.5
DCAR_018429 Daucus carota HOM05D004016 ORTHO05D004732 1.5e-20 104.0 259 36.7
Hund27940 Selenicereus undatus HOM05D004016 ORTHO05D004732 1.5e-20 104.0 229 40.2
vmacro02591 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 1.5e-20 104.0 177 45.8
TPR.G27140 Trifolium pratense HOM05D004016 ORTHO05D004732 1.9e-20 103.6 221 41.6
ClCG07G000350 Citrullus lanatus HOM05D004016 ORTHO05D004732 2.5e-20 103.2 221 41.2
Sopen09g027150 Solanum pennellii HOM05D004016 ORTHO05D004732 2.5e-20 103.2 221 37.6
THA.LOC104825992 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 2.5e-20 103.2 191 44.5
Nitab4.5_0009529g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 5.7e-20 102.1 194 42.3
Aqoxy2G03410 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 7.4e-20 101.7 217 44.2
CARHR251020 Cardamine hirsuta HOM05D004016 ORTHO05D004732 9.7e-20 101.3 227 38.8
Gohir.A11G124100 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.3e-19 100.9 231 38.1
THA.LOC104801244 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 1.3e-19 100.9 233 38.6
BcaB01g02015 Brassica carinata HOM05D004016 ORTHO05D004732 1.6e-19 100.5 211 37.9
PGSC0003DMG400019358 Solanum tuberosum HOM05D004016 ORTHO05D004732 1.6e-19 100.5 226 39.4
AT4G02715 Arabidopsis thaliana HOM05D004016 ORTHO05D004732 2.8e-19 99.8 226 38.9
Psat6g059840 Pisum sativum HOM05D004016 ORTHO05D004732 2.8e-19 99.8 205 39.5
MSTRG.17454 Avicennia marina HOM05D004016 ORTHO05D004732 3.7e-19 99.4 215 38.6
Sabra02G0041700 Salix brachista HOM05D004016 ORTHO05D004732 4.8e-19 99.0 233 40.8
Gohir.D08G204600 Gossypium hirsutum HOM05D004016 ORTHO05D004732 8.2e-19 98.2 218 41.7
Os03g0160200 Oryza sativa ssp. japonica HOM05D004016 ORTHO05D004732 8.2e-19 98.2 220 40.9
Gorai.004G216600 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.1e-18 97.8 227 41.0
SGA_v2.0_scaffold138G35322 Striga asiatica HOM05D004016 ORTHO05D004732 1.4e-18 97.4 151 46.4
Gorai.007G138300 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.8e-18 97.1 230 37.0
PGR044G0005 Punica granatum HOM05D004016 ORTHO05D004732 1.8e-18 97.1 221 38.9
SGA_v2.0_scaffold1G00497 Striga asiatica HOM05D004016 ORTHO05D004732 1.8e-18 97.1 186 41.4
Thhalv10028968m.g Eutrema salsugineum HOM05D004016 ORTHO05D004732 3.1e-18 96.3 222 38.7
BcaC04g24008 Brassica carinata HOM05D004016 ORTHO05D004732 5.3e-18 95.5 174 42.0
BolC9t53149H Brassica oleracea HOM05D004016 ORTHO05D004732 5.3e-18 95.5 174 42.0
C09p02200 Brassica napus HOM05D004016 ORTHO05D004732 9.1e-18 94.7 174 40.8
Gohir.D11G129300 Gossypium hirsutum HOM05D004016 ORTHO05D004732 9.1e-18 94.7 219 37.9
Carub.0006s3440 Capsella rubella HOM05D004016 ORTHO05D004732 1.5e-17 94.0 227 38.8
Aa31LG5G2350 Aethionema arabicum HOM05D004016 ORTHO05D004732 2.0e-17 93.6 220 39.1
Nitab4.5_0005172g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 3.4e-17 92.8 216 40.7
ClCG09G007200 Citrullus lanatus HOM05D004016 ORTHO05D004732 5.9e-17 92.0 218 36.7
Medtr1g071810 Medicago truncatula HOM05D004016 ORTHO05D004732 5.9e-17 92.0 87 58.6
AL6G50300 Arabidopsis lyrata HOM05D004016 ORTHO05D004732 7.7e-17 91.7 226 37.6
Peaxi162Scf00783g00017 Petunia axillaris HOM05D004016 ORTHO05D004732 7.7e-17 91.7 234 40.6
Solyc06g084200.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 7.7e-17 91.7 220 37.3
Sopen06g035580 Solanum pennellii HOM05D004016 ORTHO05D004732 1.0e-16 91.3 219 35.6
Actinidia24906 Actinidia chinensis HOM05D004016 ORTHO05D004732 1.3e-16 90.9 177 44.6
MELO3C015815.2 Cucumis melo HOM05D004016 ORTHO05D004732 1.3e-16 90.9 154 40.9
Nitab4.5_0008064g0020 Nicotiana tabacum HOM05D004016 ORTHO05D004732 2.2e-16 90.1 212 39.2
TPR.G24294 Trifolium pratense HOM05D004016 ORTHO05D004732 2.9e-16 89.7 227 37.4
CsaV3_7G027970 Cucumis sativus L. HOM05D004016 ORTHO05D004732 3.8e-16 89.4 149 43.0
BcaB05g23659 Brassica carinata HOM05D004016 ORTHO05D004732 6.5e-16 88.6 226 37.6
Zm00001eb403300 Zea mays HOM05D004016 ORTHO05D004732 8.5e-16 88.2 220 36.8
PGSC0003DMG400020056 Solanum tuberosum HOM05D004016 ORTHO05D004732 1.9e-15 87.0 225 33.8
BcaC03g16166 Brassica carinata HOM05D004016 ORTHO05D004732 1.2e-14 84.3 211 35.1
Psat1g067520 Pisum sativum HOM05D004016 ORTHO05D004732 1.2e-14 84.3 93 53.8
HPP92_013967 Vanilla planifolia HOM05D004016 ORTHO05D004732 1.2e-14 84.3 213 36.6
ATR0697G155 Amborella trichopoda HOM05D004016 ORTHO05D004732 6.1e-14 82.0 163 39.9
C02p39140 Brassica napus HOM05D004016 ORTHO05D004732 7.9e-14 81.6 211 35.1
ECA247G1708 Erigeron canadensis HOM05D004016 ORTHO05D004732 7.9e-14 81.6 192 36.5
A09p02110 Brassica napus HOM05D004016 ORTHO05D004732 1.4e-13 80.9 177 40.1
BraA09t35860Z Brassica rapa HOM05D004016 ORTHO05D004732 2.3e-13 80.1 177 39.5
Zm00001eb047890 Zea mays HOM05D004016 ORTHO05D004732 1.5e-12 77.4 170 37.1
BolC2t09924H Brassica oleracea HOM05D004016 ORTHO05D004732 2.6e-12 76.6 185 35.1
A03p30890 Brassica napus HOM05D004016 ORTHO05D004732 7.4e-12 75.1 84 51.2
unitig_0.g129 Utricularia gibba HOM05D004016 ORTHO05D004732 1.7e-11 73.9 160 40.6
A02p24930 Brassica napus HOM05D004016 ORTHO05D004732 2.8e-11 73.2 185 35.7
Sed0001131 Sechium edule HOM05D004016 ORTHO05D004732 4.8e-11 72.4 116 41.4
BraA02t07483Z Brassica rapa HOM05D004016 ORTHO05D004732 6.3e-11 72.0 185 35.7
SEGI_39625 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 6.9e-10 68.6 163 35.6
Oeu013891.1 Olea europaea HOM05D004016 ORTHO05D004732 1.0e-08 64.7 170 37.1
Oeu034146.1 Olea europaea HOM05D004016 ORTHO05D004732 2.9e-08 63.2 186 34.9
SMO134G0037 Selaginella moellendorffii HOM05D004016 ORTHO05D004732 1.1e-07 61.2 91 49.5
SEGI_04941 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 1.4e-07 60.8 85 40.0
BcaC01g06738 Brassica carinata HOM05D004016 ORTHO05D004732 1.9e-07 60.5 45 60.0
BcaC01g06736 Brassica carinata HOM05D002144 ORTHO05D002170 2.5e-07 60.1 83 49.4
Mapoly0128s0012 Marchantia polymorpha HOM05D004016 ORTHO05D004732 2.5e-07 60.1 140 38.6


User provided reference genes

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