Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5425 Papaver somniferum HOM05D005204 ORTHO05D006037 0.0e+00 1252.3 698 100.0
PSO832G0069 Papaver somniferum HOM05D005204 ORTHO05D006037 0.0e+00 1134.8 701 88.4
Nn1g01973 Nelumbo nucifera HOM05D005204 ORTHO05D006037 1.2e-180 637.5 713 52.7
TAR633G1027 Trochodendron aralioides HOM05D005204 ORTHO05D006037 1.3e-179 634.0 705 54.3
CSS0048761 Camellia sinensis var. sinensis HOM05D005204 ORTHO05D006037 4.2e-165 585.9 706 50.7
Thecc.04G288800 Theobroma cacao HOM05D005204 ORTHO05D006037 2.7e-164 583.2 700 50.4
MBI18_g25094_MAGBIO Magnolia biondii HOM05D005204 ORTHO05D006037 1.3e-163 580.9 712 51.5
Aqoxy5G00784 Aquilegia oxysepala HOM05D005204 ORTHO05D006037 6.9e-160 568.5 620 53.4
QL06p010355 Quercus lobata HOM05D005204 ORTHO05D006037 6.9e-160 568.5 697 50.4
Cfa015426 Carpinus fangiana HOM05D005204 ORTHO05D006037 3.4e-159 566.2 715 48.0
Rhsim02G0007000 Rhododendron simsii HOM05D005204 ORTHO05D006037 9.3e-157 558.1 709 48.9
COL.COLO4_13824 Corchorus olitorius HOM05D005204 ORTHO05D006037 2.7e-156 556.6 700 48.7
Hma1.2p1_0078F.1_g040360 Hydrangea macrophylla HOM05D005204 ORTHO05D006037 2.7e-156 556.6 706 48.7
Prupe.1G123900 Prunus persica HOM05D005204 ORTHO05D006037 6.0e-156 555.4 691 49.1
CiPaw.02G079900 Carya illinoinensis HOM05D005204 ORTHO05D006037 3.0e-155 553.1 706 49.3
MD16G1164600 Malus domestica HOM05D005204 ORTHO05D006037 5.6e-154 548.9 688 48.4
Duzib052G0651 Durio zibethinus HOM05D005204 ORTHO05D006037 1.4e-152 544.3 698 48.1
TWI73G0558 Tripterygium wilfordii HOM05D005204 ORTHO05D006037 1.8e-152 543.9 699 47.5
vmacro15212 Vaccinium macrocarpon HOM05D005204 ORTHO05D006037 6.9e-152 542.0 721 48.7
Actinidia14280 Actinidia chinensis HOM05D005204 ORTHO05D006037 7.6e-151 538.5 661 49.5
PGR004G0276 Punica granatum HOM05D005204 ORTHO05D006037 4.9e-150 535.8 694 48.3
arahy.Tifrunner.gnm1.ann1.J2HRGN Arachis hypogaea HOM05D005204 ORTHO05D006037 1.2e-148 531.2 698 47.3
Ciclev10004466m.g Citrus clementina HOM05D005204 ORTHO05D006037 1.2e-148 531.2 703 46.8
arahy.Tifrunner.gnm1.ann1.02VXE5 Arachis hypogaea HOM05D005204 ORTHO05D006037 2.1e-148 530.4 698 47.7
Gohir.A02G050800 Gossypium hirsutum HOM05D005204 ORTHO05D006037 2.1e-148 530.4 703 47.9
HanXRQChr06g0173751 Helianthus annuus HOM05D005204 ORTHO05D006037 4.6e-148 529.3 714 46.1
ECA246G1739 Erigeron canadensis HOM05D005204 ORTHO05D006037 1.3e-147 527.7 703 47.2
SalBow5G0318 Salvia bowleyana HOM05D005204 ORTHO05D006037 5.1e-147 525.8 709 47.0
Glyma.15G150700 Glycine max HOM05D005204 ORTHO05D006037 8.7e-147 525.0 697 47.3
RcHm_v2.0_Chr4g0423341 Rosa chinensis HOM05D005204 ORTHO05D006037 1.5e-146 524.2 697 47.5
Glyma.09G042300 Glycine max HOM05D005204 ORTHO05D006037 1.9e-146 523.9 696 47.4
Oeu016254.2 Olea europaea HOM05D005204 ORTHO05D006037 1.3e-145 521.2 750 45.3
Gohir.D02G055700 Gossypium hirsutum HOM05D005204 ORTHO05D006037 2.1e-145 520.4 703 47.5
MD13G1164900 Malus domestica HOM05D005204 ORTHO05D006037 2.8e-145 520.0 689 47.2
Potri.008G219100 Populus trichocarpa HOM05D005204 ORTHO05D006037 3.7e-145 519.6 693 46.9
Cpa.g.sc50.164 Carica papaya HOM05D005204 ORTHO05D006037 1.4e-144 517.7 698 47.4
Gorai.005G061700 Gossypium raimondii HOM05D005204 ORTHO05D006037 5.3e-144 515.8 703 47.4
FvH4_4g18640 Fragaria vesca HOM05D005204 ORTHO05D006037 6.9e-144 515.4 688 46.4
FAN17G1530 Fragaria x ananassa HOM05D005204 ORTHO05D006037 2.0e-143 513.8 696 46.3
Atru.chr4.2898 Acer truncatum HOM05D005204 ORTHO05D006037 4.5e-143 512.7 708 48.4
Psat1g155920 Pisum sativum HOM05D005204 ORTHO05D006037 5.8e-143 512.3 699 46.2
CAN.G484.49 Capsicum annuum HOM05D005204 ORTHO05D006037 1.0e-142 511.5 717 46.6
Ca_01912_v3 Cicer arietinum L. HOM05D005204 ORTHO05D006037 1.7e-142 510.8 701 46.2
VMungo1309G0885 Vigna mungo HOM05D005204 ORTHO05D006037 2.2e-142 510.4 710 46.3
FAN12G0364 Fragaria x ananassa HOM05D005204 ORTHO05D006037 1.1e-141 508.1 705 45.7
Lj6g0026338 Lotus japonicus HOM05D005204 ORTHO05D006037 1.1e-141 508.1 708 47.2
Lsat_1_v5_gn_3_21680 Lactuca sativa HOM05D005204 ORTHO05D006037 2.5e-141 506.9 698 49.0
Haze_01167 Corylus avellana HOM05D005204 ORTHO05D006037 4.2e-141 506.1 858 40.3
Oeu031982.1 Olea europaea HOM05D005204 ORTHO05D006037 1.2e-140 504.6 749 44.6
Sabra08G0151500 Salix brachista HOM05D005204 ORTHO05D006037 3.5e-140 503.1 693 45.6
Solyc12g099420.2 Solanum lycopersicum HOM05D005204 ORTHO05D006037 3.5e-140 503.1 714 45.7
Migut.N00079 Erythranthe guttata HOM05D005204 ORTHO05D006037 7.9e-140 501.9 707 46.4
Phvul.009G250500 Phaseolus vulgaris HOM05D005204 ORTHO05D006037 7.9e-140 501.9 727 45.1
Lalb_Chr18g0054391 Lupinus albus HOM05D005204 ORTHO05D006037 1.8e-139 500.7 678 45.6
Lalb_Chr20g0117381 Lupinus albus HOM05D005204 ORTHO05D006037 3.0e-139 500.0 693 45.0
FAN07G2681 Fragaria x ananassa HOM05D005204 ORTHO05D006037 3.9e-139 499.6 693 45.7
Manes.03G200100 Manihot esculenta HOM05D005204 ORTHO05D006037 5.1e-139 499.2 691 47.0
Peaxi162Scf00646g00324 Petunia axillaris HOM05D005204 ORTHO05D006037 6.7e-139 498.8 702 46.7
Sopen12g034090 Solanum pennellii HOM05D005204 ORTHO05D006037 8.7e-139 498.4 712 45.2
FAN12G3005 Fragaria x ananassa HOM05D005204 ORTHO05D006037 2.5e-138 496.9 629 48.3
Potri.010G010480 Populus trichocarpa HOM05D005204 ORTHO05D006037 3.3e-138 496.5 707 46.0
THA.LOC104820287 Tarenaya hassleriana HOM05D005204 ORTHO05D006037 3.3e-138 496.5 698 47.7
PGSC0003DMG400004628 Solanum tuberosum HOM05D005204 ORTHO05D006037 7.4e-138 495.4 715 45.5
Sc13g0003240 Simmondsia chinensis HOM05D005204 ORTHO05D006037 1.6e-137 494.2 701 45.5
MSTRG.24802 Avicennia marina HOM05D005204 ORTHO05D006037 6.3e-137 492.3 700 46.4
Hund20528 Selenicereus undatus HOM05D005204 ORTHO05D006037 8.2e-137 491.9 702 45.0
Cc03_g01540 Coffea canephora HOM05D005204 ORTHO05D006037 1.8e-136 490.7 755 45.0
Sabra10G0006400 Salix brachista HOM05D005204 ORTHO05D006037 1.5e-135 487.6 695 44.7
GSVIVG01035108001 Vitis vinifera HOM05D005204 ORTHO05D006037 4.5e-135 486.1 765 43.0
SGA_v2.0_scaffold428G51532 Striga asiatica HOM05D005204 ORTHO05D006037 2.2e-134 483.8 719 44.9
Nitab4.5_0003767g0030 Nicotiana tabacum HOM05D005204 ORTHO05D006037 6.5e-134 482.3 705 46.1
TPR.G28067 Trifolium pratense HOM05D005204 ORTHO05D006037 8.5e-134 481.9 635 46.8
Medtr2g436080 Medicago truncatula HOM05D005204 ORTHO05D006037 1.4e-133 481.1 634 47.3
ATR0693G386 Amborella trichopoda HOM05D005204 ORTHO05D006037 2.5e-133 480.3 697 44.9
Peaxi162Scf00065g01219 Petunia axillaris HOM05D005204 ORTHO05D006037 1.2e-132 478.0 708 45.2
EL10Ac3g06651 Beta vulgaris HOM05D005204 ORTHO05D006037 2.1e-132 477.2 717 44.6
Eucgr.H03961 Eucalyptus grandis HOM05D005204 ORTHO05D006037 4.6e-132 476.1 709 44.6
Nitab4.5_0000695g0090 Nicotiana tabacum HOM05D005204 ORTHO05D006037 2.5e-130 470.3 705 45.1
AT3G16730 Arabidopsis thaliana HOM05D005204 ORTHO05D006037 1.3e-129 468.0 690 43.9
Carub.0003s1646 Capsella rubella HOM05D005204 ORTHO05D006037 4.8e-129 466.1 693 43.6
BolC5t33716H Brassica oleracea HOM05D005204 ORTHO05D006037 8.2e-129 465.3 628 46.5
BcaC05g28856 Brassica carinata HOM05D005204 ORTHO05D006037 1.8e-128 464.2 628 46.7
C05p49580 Brassica napus HOM05D005204 ORTHO05D006037 5.3e-128 462.6 628 46.3
AL3G29660 Arabidopsis lyrata HOM05D005204 ORTHO05D006037 1.2e-127 461.5 697 44.5
Sp3g15000 Schrenkiella parvula HOM05D005204 ORTHO05D006037 3.4e-127 459.9 698 43.4
A05p32870 Brassica napus HOM05D005204 ORTHO05D006037 4.5e-127 459.5 630 44.9
Ah.04g153660 Amaranthus hybridus HOM05D005204 ORTHO05D006037 1.0e-126 458.4 699 44.2
HPP92_012404 Vanilla planifolia HOM05D005204 ORTHO05D006037 1.7e-126 457.6 696 44.3
BraA05t22110Z Brassica rapa HOM05D005204 ORTHO05D006037 1.9e-125 454.1 694 42.7
Sed0015514 Sechium edule HOM05D005204 ORTHO05D006037 1.9e-125 454.1 697 42.5
Nitab4.5_0003484g0040 Nicotiana tabacum HOM05D005204 ORTHO05D006037 2.5e-125 453.8 705 44.3
BcaB06g25769 Brassica carinata HOM05D005204 ORTHO05D006037 2.7e-124 450.3 688 43.3
Thhalv10020220m.g Eutrema salsugineum HOM05D005204 ORTHO05D006037 2.7e-124 450.3 696 43.8
AUR62015273 Chenopodium quinoa HOM05D005204 ORTHO05D006037 3.0e-123 446.8 687 44.1
BraA01t03817Z Brassica rapa HOM05D005204 ORTHO05D006037 6.7e-123 445.7 689 43.0
AUR62018070 Chenopodium quinoa HOM05D005204 ORTHO05D006037 6.7e-123 445.7 741 42.2
A01p37560 Brassica napus HOM05D005204 ORTHO05D006037 1.1e-122 444.9 689 43.1
Dinv29726 Davidia involucrata HOM05D005204 ORTHO05D006037 1.5e-122 444.5 583 46.8
BolC1t04731H Brassica oleracea HOM05D005204 ORTHO05D006037 2.6e-122 443.7 687 43.2
C01p47610 Brassica napus HOM05D005204 ORTHO05D006037 1.7e-121 441.0 693 43.0
Nitab4.5_0000570g0320 Nicotiana tabacum HOM05D005204 ORTHO05D006037 8.2e-121 438.7 737 42.2
Aa31LG8G3820 Aethionema arabicum HOM05D005204 ORTHO05D006037 2.4e-120 437.2 705 43.1
BcaC09g48627 Brassica carinata HOM05D005204 ORTHO05D006037 2.2e-118 430.6 626 45.0
MELO3C010685.2 Cucumis melo HOM05D005204 ORTHO05D006037 3.8e-118 429.9 603 45.9
Lj6A680G91 Lonicera japonica HOM05D005204 ORTHO05D006037 8.5e-118 428.7 621 45.4
Zm00001eb322750 Zea mays HOM05D005204 ORTHO05D006037 8.8e-115 418.7 715 41.0
DCAR_030505 Daucus carota HOM05D005204 ORTHO05D006037 2.6e-114 417.2 656 41.6
Manes.03G198500 Manihot esculenta HOM05D005204 ORTHO05D006037 1.3e-113 414.8 612 45.3
ClCG08G017750 Citrullus lanatus HOM05D005204 ORTHO05D006037 5.3e-112 409.5 631 43.4
CsaV3_7G000690 Cucumis sativus L. HOM05D005204 ORTHO05D006037 1.1e-104 385.2 597 42.5
CsaV3_2G024870 Cucumis sativus L. HOM05D005204 ORTHO05D006037 5.4e-104 382.9 623 42.9
CDE05G2961 Ceratophyllum demersum HOM05D005204 ORTHO05D006037 2.7e-103 380.6 712 38.5
SHI00244 Sapria himalayana HOM05D005204 ORTHO05D006037 1.6e-100 371.3 802 36.3
Os07g0517300 Oryza sativa ssp. japonica HOM05D005204 ORTHO05D006037 1.8e-99 367.9 690 38.8
Nn3g19294 Nelumbo nucifera HOM05D005204 ORTHO05D006037 6.8e-99 365.9 625 39.7
DCAR_023300 Daucus carota HOM05D005204 ORTHO05D006037 3.1e-96 357.1 641 39.6
TAR362G0889 Trochodendron aralioides HOM05D005204 ORTHO05D006037 1.2e-90 338.6 435 49.0
SEGI_08509 Sequoiadendron giganteum HOM05D005204 ORTHO05D006037 1.7e-89 334.7 630 37.0
CARHR091990 Cardamine hirsuta HOM05D005204 ORTHO05D006037 1.4e-80 305.1 457 42.9
Mapoly0137s0008 Marchantia polymorpha HOM05D005204 ORTHO05D006037 1.5e-77 295.0 671 34.9
SMO367G0335 Selaginella moellendorffii HOM05D005204 ORTHO05D006037 4.3e-77 293.5 609 35.5
Zm00001eb106060 Zea mays HOM05D005204 ORTHO05D006037 9.5e-77 292.4 618 35.6
Dinv44351 Davidia involucrata HOM05D005204 ORTHO05D006037 1.7e-62 245.0 697 32.4
TAR624G0737 Trochodendron aralioides HOM05D005204 ORTHO05D006037 3.8e-49 200.7 181 60.8
unitig_749.g14080 Utricularia gibba HOM05D005204 ORTHO05D006037 1.0e-46 192.6 671 28.2
Actinidia13388 Actinidia chinensis HOM05D005204 ORTHO05D006037 3.0e-46 191.0 174 62.1
AagrBONN_evm.TU.Sc2ySwM_340.303 Anthoceros agrestis HOM05D005204 ORTHO05D006037 7.4e-45 186.4 456 34.0
ATR0693G078 Amborella trichopoda HOM05D005204 ORTHO05D006037 1.1e-43 182.6 227 51.1
CARHR091980 Cardamine hirsuta HOM05D005204 ORTHO05D006037 7.1e-40 169.9 219 48.9
TAR624G0487 Trochodendron aralioides HOM05D005204 ORTHO05D006037 4.8e-36 157.1 315 37.5
CBR_g38039 Chara braunii HOM05D005204 ORTHO05D006037 1.1e-35 156.0 687 26.2
Dinv29725 Davidia involucrata HOM05D005204 ORTHO05D006037 1.7e-33 148.7 99 77.8
PGR004G0772 Punica granatum HOM05D005204 ORTHO05D006037 1.1e-27 129.4 128 54.7
PRCOL_00000998 Prasinoderma coloniale HOM05D005204 ORTHO05D006037 2.4e-27 128.3 691 25.9
DCAR_031703 Daucus carota HOM05D005204 ORTHO05D006037 2.1e-23 115.2 107 53.3
Manes.17G118669 Manihot esculenta HOM05D005204 ORTHO05D006037 2.9e-17 94.7 137 48.2
Cre09.g408900 Chlamydomonas reinhardtii HOM05D005204 ORTHO05D006037 2.2e-12 78.6 115 42.6
TAR362G0435 Trochodendron aralioides HOM05D005204 ORTHO05D006037 5.5e-08 63.9 96 46.9
Zm00001eb009560 Zea mays HOM05D005204 ORTHO05D006037 7.2e-08 63.5 168 31.0
Zm00001eb046380 Zea mays HOM05D005204 ORTHO05D006037 7.2e-08 63.5 168 31.0
Zm00001eb219840 Zea mays HOM05D005204 ORTHO05D006037 7.2e-08 63.5 168 31.0
Zm00001eb139240 Zea mays HOM05D001287 ORTHO05D006037 1.2e-07 62.8 64 48.4
ATR0296G001 Amborella trichopoda HOM05D005204 ORTHO05D006037 6.1e-07 60.5 93 47.3


User provided reference genes

Program Settings