Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 7.1e-132 474.2 279 100.0
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 7.8e-131 470.7 279 98.9
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 6.7e-98 361.3 243 78.2
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 6.9e-95 351.3 288 75.3
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 2.0e-94 349.7 243 78.6
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 2.2e-93 346.3 242 76.9
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 8.4e-93 344.4 242 76.4
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 1.1e-92 344.0 242 76.0
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 5.5e-92 341.7 242 75.2
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 1.2e-91 340.5 244 76.6
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 1.6e-91 340.1 242 74.8
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 6.0e-91 338.2 249 76.7
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 6.0e-91 338.2 242 76.0
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 3.0e-90 335.9 250 74.0
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 3.9e-90 335.5 244 73.4
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 6.7e-90 334.7 248 73.4
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 6.7e-90 334.7 248 73.4
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 6.7e-90 334.7 249 73.9
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 1.3e-88 330.5 288 72.2
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 1.3e-88 330.5 249 72.7
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 1.3e-88 330.5 249 73.1
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 2.8e-88 329.3 248 71.8
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 2.8e-88 329.3 249 72.7
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 3.7e-88 328.9 246 76.0
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 4.8e-88 328.6 276 66.3
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 3.1e-87 325.9 243 73.3
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 3.1e-87 325.9 246 74.4
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 4.1e-87 325.5 251 72.9
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 6.9e-87 324.7 265 68.7
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 9.0e-87 324.3 251 71.7
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 1.2e-86 323.9 252 73.0
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 2.0e-86 323.2 242 73.1
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 2.6e-86 322.8 249 73.9
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 2.6e-86 322.8 249 71.9
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 4.5e-86 322.0 242 71.5
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 5.9e-86 321.6 285 65.6
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 1.7e-85 320.1 244 72.5
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 1.7e-85 320.1 244 72.5
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 1.7e-85 320.1 250 70.8
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 5.0e-85 318.5 244 72.1
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 6.5e-85 318.2 244 72.1
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 6.5e-85 318.2 248 71.0
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 6.5e-85 318.2 250 70.0
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 6.5e-85 318.2 245 71.4
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 1.1e-84 317.4 269 65.8
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 2.5e-84 316.2 246 72.8
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 4.2e-84 315.5 303 60.7
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 4.2e-84 315.5 275 65.8
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 7.2e-84 314.7 246 72.0
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 1.2e-83 313.9 271 66.1
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 2.1e-83 313.2 313 62.3
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 2.7e-83 312.8 244 72.1
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 2.7e-83 312.8 243 70.0
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 4.6e-83 312.0 255 67.8
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 4.6e-83 312.0 255 67.8
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 6.1e-83 311.6 280 66.4
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 6.1e-83 311.6 273 65.9
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 7.9e-83 311.2 252 68.3
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 7.9e-83 311.2 246 72.0
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 7.9e-83 311.2 246 72.0
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 7.9e-83 311.2 257 66.9
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.0e-82 310.8 246 72.0
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 1.3e-82 310.5 246 71.5
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 1.8e-82 310.1 243 71.2
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 2.3e-82 309.7 247 70.0
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 2.3e-82 309.7 264 65.9
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 3.0e-82 309.3 303 58.1
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 6.7e-82 308.1 284 63.7
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 6.7e-82 308.1 303 59.4
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 6.7e-82 308.1 258 67.1
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 1.9e-81 306.6 242 69.0
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.6e-80 303.5 250 70.4
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.6e-80 303.5 250 70.4
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 6.3e-80 301.6 297 61.3
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 8.2e-80 301.2 265 65.7
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 4.1e-79 298.9 242 66.5
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 5.3e-79 298.5 295 60.7
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.5e-78 297.0 275 64.4
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 1.0e-77 294.3 258 64.0
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 1.0e-77 294.3 291 59.5
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 1.3e-77 293.9 260 64.6
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 2.2e-77 293.1 242 66.5
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 5.0e-77 292.0 213 74.2
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 1.1e-76 290.8 210 72.4
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 3.0e-74 282.7 249 64.7
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 1.1e-73 280.8 243 66.3
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 1.8e-71 273.5 256 62.1
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 6.9e-71 271.6 245 64.5
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 7.7e-70 268.1 256 60.9
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 1.1e-68 264.2 179 76.5
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 3.2e-68 262.7 252 61.9
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 7.2e-68 261.5 279 56.6
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.6e-67 260.4 246 62.6
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 1.0e-66 257.7 249 61.8
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 2.3e-66 256.5 227 60.8
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 1.7e-64 250.4 251 59.8
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 4.1e-63 245.7 174 73.6
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 2.6e-62 243.0 247 57.5
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 4.5e-62 242.3 247 59.1
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 2.9e-61 239.6 174 73.0
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 4.2e-60 235.7 367 44.7
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 1.5e-52 210.7 256 53.5
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 4.4e-49 199.1 188 60.1
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 7.5e-49 198.4 134 78.4
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 5.5e-44 182.2 141 70.9
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.2e-38 164.5 134 64.2
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 2.9e-37 159.8 182 56.6
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 3.8e-37 159.5 127 69.3
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 1.5e-33 147.5 134 63.4
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 8.6e-29 131.7 77 85.7
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 9.5e-28 128.3 133 56.4
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 1.8e-26 124.0 109 62.4
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 7.0e-23 112.1 115 59.1
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 9.2e-15 85.1 102 50.0
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 6.0e-14 82.4 113 43.4
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 2.3e-13 80.5 79 62.0
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 1.1e-12 78.2 115 42.6
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 7.1e-07 58.9 42 64.3
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 1.6e-06 57.8 106 45.3


User provided reference genes

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