Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5250 Papaver somniferum HOM05D005721 ORTHO05D006758 0.0e+00 1291.2 648 100.0
PSO210G3246 Papaver somniferum HOM05D005721 ORTHO05D006758 0.0e+00 1255.4 664 95.6
TAR383G0756 Trochodendron aralioides HOM05D005721 ORTHO05D006758 3.6e-296 1021.1 655 78.0
Aqoxy7G03983 Aquilegia oxysepala HOM05D005721 ORTHO05D006758 7.0e-292 1006.9 655 77.1
GSVIVG01016897001 Vitis vinifera HOM05D005721 ORTHO05D006758 7.0e-284 980.3 653 74.7
Hma1.2p1_0388F.1_g142110 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 5.8e-278 960.7 655 72.8
Nn6g35400 Nelumbo nucifera HOM05D005721 ORTHO05D006758 7.5e-278 960.3 652 73.6
Haze_15914 Corylus avellana HOM05D005721 ORTHO05D006758 5.4e-276 954.1 653 73.0
CSS0018154 Camellia sinensis var. sinensis HOM05D005721 ORTHO05D006758 1.6e-275 952.6 654 73.1
MBI01_g16575_MAGBIO Magnolia biondii HOM05D005721 ORTHO05D006758 5.1e-274 947.6 658 72.6
MD09G1196700 Malus domestica HOM05D005721 ORTHO05D006758 5.1e-274 947.6 649 72.6
Dinv37937 Davidia involucrata HOM05D005721 ORTHO05D006758 4.3e-273 944.5 654 73.2
MD17G1178100 Malus domestica HOM05D005721 ORTHO05D006758 4.3e-273 944.5 649 72.1
Gohir.A10G062400 Gossypium hirsutum HOM05D005721 ORTHO05D006758 3.1e-271 938.3 653 71.8
Duzib235G0012 Durio zibethinus HOM05D005721 ORTHO05D006758 4.0e-271 937.9 653 73.2
Prupe.3G053200 Prunus persica HOM05D005721 ORTHO05D006758 6.8e-271 937.2 655 71.6
Gorai.011G068100 Gossypium raimondii HOM05D005721 ORTHO05D006758 1.5e-270 936.0 653 71.8
Thecc.06G106800 Theobroma cacao HOM05D005721 ORTHO05D006758 1.5e-270 936.0 651 73.1
Actinidia21738 Actinidia chinensis HOM05D005721 ORTHO05D006758 2.0e-270 935.6 657 71.4
QL05p015721 Quercus lobata HOM05D005721 ORTHO05D006758 2.2e-269 932.2 653 71.7
Ciclev10025098m.g Citrus clementina HOM05D005721 ORTHO05D006758 2.9e-269 931.8 653 71.4
CiPaw.01G227700 Carya illinoinensis HOM05D005721 ORTHO05D006758 6.4e-269 930.6 653 70.6
QL05p015579 Quercus lobata HOM05D005721 ORTHO05D006758 1.4e-268 929.5 653 71.7
CANSAT56G2950 Cannabis sativa HOM05D005721 ORTHO05D006758 3.2e-268 928.3 647 71.1
Eucgr.F03100 Eucalyptus grandis HOM05D005721 ORTHO05D006758 5.4e-268 927.5 657 72.0
Nn8g38942 Nelumbo nucifera HOM05D005721 ORTHO05D006758 7.1e-268 927.2 653 70.9
PGR102G0208 Punica granatum HOM05D005721 ORTHO05D006758 6.0e-267 924.1 660 70.8
Manes.11G029200 Manihot esculenta HOM05D005721 ORTHO05D006758 1.3e-266 922.9 654 69.1
RcHm_v2.0_Chr2g0142311 Rosa chinensis HOM05D005721 ORTHO05D006758 8.6e-266 920.2 651 70.2
vmacro18826 Vaccinium macrocarpon HOM05D005721 ORTHO05D006758 8.6e-266 920.2 654 71.7
Duzib192G0301 Durio zibethinus HOM05D005721 ORTHO05D006758 1.6e-264 916.0 650 71.8
Dinv30404 Davidia involucrata HOM05D005721 ORTHO05D006758 8.1e-264 913.7 621 74.4
Lj3g0007444 Lotus japonicus HOM05D005721 ORTHO05D006758 8.1e-264 913.7 652 69.5
FvH4_6g32880 Fragaria vesca HOM05D005721 ORTHO05D006758 1.1e-263 913.3 649 70.3
Sed0006169 Sechium edule HOM05D005721 ORTHO05D006758 8.9e-263 910.2 654 69.4
FAN02G2457 Fragaria x ananassa HOM05D005721 ORTHO05D006758 1.2e-262 909.8 649 70.1
FAN05G3306 Fragaria x ananassa HOM05D005721 ORTHO05D006758 1.2e-262 909.8 649 70.4
Atru.chr1.3621 Acer truncatum HOM05D005721 ORTHO05D006758 1.5e-262 909.4 651 69.4
Medtr8g015550 Medicago truncatula HOM05D005721 ORTHO05D006758 1.6e-259 899.4 652 68.3
Glyma.08G196700 Glycine max HOM05D005721 ORTHO05D006758 2.7e-259 898.7 661 68.8
CsaV3_7G034930 Cucumis sativus L. HOM05D005721 ORTHO05D006758 3.5e-259 898.3 652 68.9
Psat4g194600 Pisum sativum HOM05D005721 ORTHO05D006758 1.0e-258 896.7 652 68.7
Glyma.07G013000 Glycine max HOM05D005721 ORTHO05D006758 1.7e-258 896.0 651 69.3
Lalb_Chr01g0013341 Lupinus albus HOM05D005721 ORTHO05D006758 6.6e-258 894.0 656 68.9
Lsat_1_v5_gn_4_96061 Lactuca sativa HOM05D005721 ORTHO05D006758 3.3e-257 891.7 648 68.2
Ca_23291_v3 Cicer arietinum L. HOM05D005721 ORTHO05D006758 7.3e-257 890.6 647 68.0
Solyc03g121350.3 Solanum lycopersicum HOM05D005721 ORTHO05D006758 4.8e-256 887.9 651 67.6
Cc04_g02230 Coffea canephora HOM05D005721 ORTHO05D006758 1.8e-255 885.9 648 70.1
Sopen03g040160 Solanum pennellii HOM05D005721 ORTHO05D006758 2.4e-255 885.6 651 67.4
Nitab4.5_0004848g0040 Nicotiana tabacum HOM05D005721 ORTHO05D006758 9.0e-255 883.6 658 67.0
ECA232G2751 Erigeron canadensis HOM05D005721 ORTHO05D006758 4.5e-254 881.3 644 67.5
Phvul.010G142500 Phaseolus vulgaris HOM05D005721 ORTHO05D006758 1.1e-252 876.7 651 67.6
CAN.G1668.6 Capsicum annuum HOM05D005721 ORTHO05D006758 2.4e-252 875.5 656 66.8
VMungo0331G1465 Vigna mungo HOM05D005721 ORTHO05D006758 7.1e-252 874.0 651 67.4
Os01g0706700 Oryza sativa ssp. japonica HOM05D005721 ORTHO05D006758 6.0e-251 870.9 644 69.1
Migut.I00999 Erythranthe guttata HOM05D005721 ORTHO05D006758 7.9e-251 870.5 650 67.7
C06p47250 Brassica napus HOM05D005721 ORTHO05D006758 6.2e-248 860.9 647 67.4
BolC6t39764H Brassica oleracea HOM05D005721 ORTHO05D006758 6.2e-248 860.9 647 67.4
SGA_v2.0_scaffold71G23752 Striga asiatica HOM05D005721 ORTHO05D006758 1.4e-247 859.8 652 66.6
A07p39040 Brassica napus HOM05D005721 ORTHO05D006758 3.1e-247 858.6 647 67.2
ATR0789G086 Amborella trichopoda HOM05D005721 ORTHO05D006758 9.0e-247 857.1 664 69.0
Hund07658 Selenicereus undatus HOM05D005721 ORTHO05D006758 9.0e-247 857.1 649 67.3
AL2G32770 Arabidopsis lyrata HOM05D005721 ORTHO05D006758 1.5e-246 856.3 651 66.8
Gohir.D10G064100 Gossypium hirsutum HOM05D005721 ORTHO05D006758 1.5e-246 856.3 579 73.1
Nitab4.5_0006071g0030 Nicotiana tabacum HOM05D005721 ORTHO05D006758 2.6e-246 855.5 657 66.7
Carub.0002s1978 Capsella rubella HOM05D005721 ORTHO05D006758 7.6e-246 854.0 651 66.7
BraA07t31454Z Brassica rapa HOM05D005721 ORTHO05D006758 2.2e-245 852.4 658 66.3
AT1G73020 Arabidopsis thaliana HOM05D005721 ORTHO05D006758 3.8e-245 851.7 651 66.4
Thhalv10018233m.g Eutrema salsugineum HOM05D005721 ORTHO05D006758 1.4e-244 849.7 651 66.4
Sp5g27980 Schrenkiella parvula HOM05D005721 ORTHO05D006758 2.4e-244 849.0 647 66.6
THA.LOC104813944 Tarenaya hassleriana HOM05D005721 ORTHO05D006758 2.1e-243 845.9 652 66.6
CARHR065990 Cardamine hirsuta HOM05D005721 ORTHO05D006758 1.9e-241 839.3 650 65.1
Aa31LG4G3310 Aethionema arabicum HOM05D005721 ORTHO05D006758 4.8e-240 834.7 651 65.4
Peaxi162Scf00038g01247 Petunia axillaris HOM05D005721 ORTHO05D006758 3.8e-237 825.1 648 64.0
Lj9A516G96 Lonicera japonica HOM05D005721 ORTHO05D006758 1.4e-236 823.2 662 65.0
TPR.G8754 Trifolium pratense HOM05D005721 ORTHO05D006758 1.9e-236 822.8 616 66.1
ClCG09G000510 Citrullus lanatus HOM05D005721 ORTHO05D006758 3.2e-236 822.0 652 64.6
BraA07t30638Z Brassica rapa HOM05D005721 ORTHO05D006758 1.5e-233 813.1 647 64.0
BolC6t38551H Brassica oleracea HOM05D005721 ORTHO05D006758 5.3e-231 804.7 647 63.4
BcaC08g45678 Brassica carinata HOM05D005721 ORTHO05D006758 4.5e-230 801.6 647 63.2
arahy.Tifrunner.gnm1.ann1.HT12QJ Arachis hypogaea HOM05D005721 ORTHO05D006758 1.7e-229 799.7 648 62.3
arahy.Tifrunner.gnm1.ann1.NQY1Y2 Arachis hypogaea HOM05D005721 ORTHO05D006758 1.7e-229 799.7 646 62.4
A07p30000 Brassica napus HOM05D005721 ORTHO05D006758 4.2e-228 795.0 647 63.1
Rhsim08G0230700 Rhododendron simsii HOM05D005721 ORTHO05D006758 2.7e-227 792.3 653 63.7
C06p34410 Brassica napus HOM05D005721 ORTHO05D006758 6.1e-227 791.2 647 62.4
EL10Ac9g21136 Beta vulgaris HOM05D005721 ORTHO05D006758 3.2e-220 768.8 678 61.1
Oeu001923.1 Olea europaea HOM05D005721 ORTHO05D006758 2.3e-218 762.7 649 62.7
Zm00001eb361150 Zea mays HOM05D005721 ORTHO05D006758 3.4e-214 748.8 552 69.4
Hma1.2p1_0388F.1_g142120 Hydrangea macrophylla HOM05D005721 ORTHO05D006758 2.9e-213 745.7 526 70.3
DCAR_031423 Daucus carota HOM05D005721 ORTHO05D006758 1.7e-208 729.9 647 60.1
Sc12g0009950 Simmondsia chinensis HOM05D005721 ORTHO05D006758 6.5e-205 718.0 557 64.6
unitig_26.g8931 Utricularia gibba HOM05D005721 ORTHO05D006758 2.2e-197 693.0 628 58.4
Cpa.g.sc131.22 Carica papaya HOM05D005721 ORTHO05D006758 8.5e-197 691.0 654 58.9
AUR62023905 Chenopodium quinoa HOM05D005721 ORTHO05D006758 2.4e-191 672.9 621 58.0
AUR62038341 Chenopodium quinoa HOM05D005721 ORTHO05D006758 9.1e-191 671.0 685 54.0
Ah.01g004440 Amaranthus hybridus HOM05D005721 ORTHO05D006758 2.9e-189 666.0 652 57.7
Zm00001eb155350 Zea mays HOM05D005721 ORTHO05D006758 5.2e-178 628.6 499 65.7
AagrBONN_evm.TU.Sc2ySwM_344.674 Anthoceros agrestis HOM05D005721 ORTHO05D006758 2.1e-171 606.7 659 48.9
Mapoly0004s0214 Marchantia polymorpha HOM05D005721 ORTHO05D006758 7.0e-167 591.7 650 50.0
SMO147G0374 Selaginella moellendorffii HOM05D005721 ORTHO05D006758 5.0e-165 585.5 663 46.9
Actinidia32127 Actinidia chinensis HOM05D005721 ORTHO05D006758 5.6e-164 582.0 652 50.9
Oeu026535.1 Olea europaea HOM05D005721 ORTHO05D006758 1.2e-163 580.9 441 65.5
MELO3C024406.2 Cucumis melo HOM05D005721 ORTHO05D006758 3.1e-162 576.2 593 54.1
Pp3c7_22640 Physcomitrium patens HOM05D005721 ORTHO05D006758 6.0e-158 562.0 647 46.7
CBR_g57226 Chara braunii HOM05D005721 ORTHO05D006758 1.0e-125 454.9 621 40.6
FAN14G1222 Fragaria x ananassa HOM05D005721 ORTHO05D006758 2.7e-86 323.9 233 65.2
arahy.Tifrunner.gnm1.ann1.NL3M0M Arachis hypogaea HOM05D005721 ORTHO05D006758 2.0e-84 317.8 336 53.6
Zm00001eb344360 Zea mays HOM05D005721 ORTHO05D006758 7.3e-55 219.5 138 79.0
Oeu023783.1 Olea europaea HOM05D005721 ORTHO05D006758 6.2e-54 216.5 278 46.8
FvH4_6g32370 Fragaria vesca HOM05D005721 ORTHO05D006758 3.3e-47 194.1 149 62.4
Zm00001eb192810 Zea mays HOM05D005721 ORTHO05D006758 6.8e-45 186.4 110 84.5
Glyma.16G086100 Glycine max HOM05D005721 ORTHO05D006758 6.4e-43 179.9 107 80.4
arahy.Tifrunner.gnm1.ann1.P3QXG2 Arachis hypogaea HOM05D005721 ORTHO05D006758 1.1e-42 179.1 173 54.3
Gorai.010G178600 Gossypium raimondii HOM05D005721 ORTHO05D006758 4.1e-42 177.2 156 59.6
Glyma.16G136400 Glycine max HOM05D005721 ORTHO05D006758 5.4e-42 176.8 107 79.4
Zm00001eb419420 Zea mays HOM05D005721 ORTHO05D006758 1.1e-39 169.1 97 84.5
arahy.Tifrunner.gnm1.ann1.402B9T Arachis hypogaea HOM05D005721 ORTHO05D006758 5.2e-37 160.2 260 37.3
SEGI_20658 Sequoiadendron giganteum HOM05D005721 ORTHO05D006758 6.4e-35 153.3 235 36.6
QL05p015216 Quercus lobata HOM05D005721 ORTHO05D006758 8.4e-35 152.9 166 53.0
Gohir.A06G146950 Gossypium hirsutum HOM05D005721 ORTHO05D006758 7.1e-34 149.8 153 53.6
Glyma.12G149950 Glycine max HOM05D005721 ORTHO05D006758 1.7e-32 145.2 85 81.2
VMungo0251G0043 Vigna mungo HOM05D005721 ORTHO05D006758 2.3e-32 144.8 131 56.5
Gohir.D06G152751 Gossypium hirsutum HOM05D005721 ORTHO05D006758 8.7e-32 142.9 155 51.6
HanXRQChr05g0162621 Helianthus annuus HOM05D005721 ORTHO05D006758 1.2e-28 132.5 83 78.3
arahy.Tifrunner.gnm1.ann1.F8M988 Arachis hypogaea HOM05D005721 ORTHO05D006758 2.2e-27 128.3 90 65.6
HanXRQChr04g0123091 Helianthus annuus HOM05D005721 ORTHO05D006758 3.2e-26 124.4 80 75.0
arahy.Tifrunner.gnm1.ann1.SY3941 Arachis hypogaea HOM05D005721 ORTHO05D006758 4.3e-23 114.0 82 64.6
Glyma.09G112900 Glycine max HOM05D005721 ORTHO05D006758 2.9e-19 101.3 99 57.6
Cfa026500 Carpinus fangiana HOM05D005721 ORTHO05D006758 3.8e-19 100.9 502 23.9
COL.COLO4_30597 Corchorus olitorius HOM05D005721 ORTHO05D006758 2.7e-17 94.7 84 58.3
arahy.Tifrunner.gnm1.ann1.EXE9LQ Arachis hypogaea HOM05D005721 ORTHO05D006758 1.1e-15 89.4 56 71.4
Glyma.19G071451 Glycine max HOM05D005721 ORTHO05D006758 1.3e-14 85.9 54 75.9
HanXRQChr05g0131511 Helianthus annuus HOM05D005721 ORTHO05D006758 1.6e-14 85.5 101 48.5
HanXRQChr09g0276291 Helianthus annuus HOM05D005721 ORTHO05D006758 2.1e-14 85.1 48 81.2
MCO06G118 Micromonas commoda HOM05D005721 ORTHO05D006758 2.0e-12 78.6 204 27.9


User provided reference genes

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