Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5188 Papaver somniferum HOM05D004381 ORTHO05D005200 7.2e-137 490.7 277 100.0
PSO210G6888 Papaver somniferum HOM05D004381 ORTHO05D005200 1.7e-133 479.6 277 98.2
TAR623G1292 Trochodendron aralioides HOM05D004381 ORTHO05D005200 1.2e-123 446.8 277 88.8
FAN16G2672 Fragaria x ananassa HOM05D004381 ORTHO05D005200 7.8e-123 444.1 277 89.5
Aqoxy7G00799 Aquilegia oxysepala HOM05D004381 ORTHO05D005200 1.7e-122 443.0 277 89.9
FvH4_3g43050 Fragaria vesca HOM05D004381 ORTHO05D005200 1.7e-122 443.0 277 89.2
FAN11G3745 Fragaria x ananassa HOM05D004381 ORTHO05D005200 1.7e-122 443.0 277 89.2
FAN21G3999 Fragaria x ananassa HOM05D004381 ORTHO05D005200 3.9e-122 441.8 277 89.2
RcHm_v2.0_Chr5g0077111 Rosa chinensis HOM05D004381 ORTHO05D005200 3.9e-122 441.8 277 88.8
Rhsim13G0223600 Rhododendron simsii HOM05D004381 ORTHO05D005200 6.6e-122 441.0 277 88.1
Prupe.6G023700 Prunus persica HOM05D004381 ORTHO05D005200 2.5e-121 439.1 277 88.1
Migut.D00582 Erythranthe guttata HOM05D004381 ORTHO05D005200 5.6e-121 438.0 277 87.4
Lsat_1_v5_gn_6_48200 Lactuca sativa HOM05D004381 ORTHO05D005200 5.6e-121 438.0 277 87.7
Atru.chr3.2598 Acer truncatum HOM05D004381 ORTHO05D005200 7.3e-121 437.6 277 88.1
CSS0020783 Camellia sinensis var. sinensis HOM05D004381 ORTHO05D005200 7.3e-121 437.6 277 87.7
Cfa009743 Carpinus fangiana HOM05D004381 ORTHO05D005200 7.3e-121 437.6 277 87.7
CANSAT35G1357 Cannabis sativa HOM05D004381 ORTHO05D005200 2.8e-120 435.6 277 86.3
Manes.06G166500 Manihot esculenta HOM05D004381 ORTHO05D005200 4.7e-120 434.9 277 86.6
Phvul.L011443 Phaseolus vulgaris HOM05D004381 ORTHO05D005200 4.7e-120 434.9 277 87.4
Cc06_g22560 Coffea canephora HOM05D004381 ORTHO05D005200 1.0e-119 433.7 277 86.3
Gorai.004G018900 Gossypium raimondii HOM05D004381 ORTHO05D005200 1.0e-119 433.7 277 87.0
HanXRQChr02g0056281 Helianthus annuus HOM05D004381 ORTHO05D005200 1.4e-119 433.3 277 86.3
Gohir.A08G013200 Gossypium hirsutum HOM05D004381 ORTHO05D005200 2.3e-119 432.6 277 87.0
GSVIVG01025302001 Vitis vinifera HOM05D004381 ORTHO05D005200 3.1e-119 432.2 277 86.3
ECA233G0542 Erigeron canadensis HOM05D004381 ORTHO05D005200 4.0e-119 431.8 277 85.6
COL.COLO4_24848 Corchorus olitorius HOM05D004381 ORTHO05D005200 5.2e-119 431.4 277 85.9
Gohir.D08G023600 Gossypium hirsutum HOM05D004381 ORTHO05D005200 5.2e-119 431.4 277 86.6
Ca_01288_v3 Cicer arietinum L. HOM05D004381 ORTHO05D005200 1.2e-118 430.3 277 85.6
Potri.001G018800 Populus trichocarpa HOM05D004381 ORTHO05D005200 1.2e-118 430.3 277 85.2
CiPaw.14G121000 Carya illinoinensis HOM05D004381 ORTHO05D005200 2.0e-118 429.5 277 85.9
Solyc11g062020.2 Solanum lycopersicum HOM05D004381 ORTHO05D005200 2.0e-118 429.5 277 86.6
Sopen11g023990 Solanum pennellii HOM05D004381 ORTHO05D005200 2.0e-118 429.5 277 86.6
Ciclev10016213m.g Citrus clementina HOM05D004381 ORTHO05D005200 2.6e-118 429.1 277 86.3
Thecc.09G228300 Theobroma cacao HOM05D004381 ORTHO05D005200 2.6e-118 429.1 277 85.9
TPR.G6819 Trifolium pratense HOM05D004381 ORTHO05D005200 2.6e-118 429.1 277 86.3
QL01p005255 Quercus lobata HOM05D004381 ORTHO05D005200 3.4e-118 428.7 276 86.2
DCAR_031567 Daucus carota HOM05D004381 ORTHO05D005200 5.8e-118 427.9 277 85.9
MD11G1029400 Malus domestica HOM05D004381 ORTHO05D005200 5.8e-118 427.9 277 86.6
MSTRG.21391 Avicennia marina HOM05D004381 ORTHO05D005200 7.5e-118 427.6 277 85.9
Eucgr.J00789 Eucalyptus grandis HOM05D004381 ORTHO05D005200 7.5e-118 427.6 277 85.6
Sp3g18900 Schrenkiella parvula HOM05D004381 ORTHO05D005200 7.5e-118 427.6 277 84.1
Medtr2g098150 Medicago truncatula HOM05D004381 ORTHO05D005200 9.8e-118 427.2 277 85.9
Glyma.13G340900 Glycine max HOM05D004381 ORTHO05D005200 1.3e-117 426.8 277 84.8
Migut.O00580 Erythranthe guttata HOM05D004381 ORTHO05D005200 2.2e-117 426.0 276 85.9
Duzib150G0594 Durio zibethinus HOM05D004381 ORTHO05D005200 2.9e-117 425.6 277 84.5
Potri.003G205100 Populus trichocarpa HOM05D004381 ORTHO05D005200 2.9e-117 425.6 277 85.6
Hund22064 Selenicereus undatus HOM05D004381 ORTHO05D005200 2.9e-117 425.6 277 85.2
CiPaw.13G163200 Carya illinoinensis HOM05D004381 ORTHO05D005200 3.7e-117 425.2 277 84.1
Lalb_Chr22g0352331 Lupinus albus HOM05D004381 ORTHO05D005200 3.7e-117 425.2 277 84.8
Thhalv10021300m.g Eutrema salsugineum HOM05D004381 ORTHO05D005200 6.4e-117 424.5 277 83.0
Peaxi162Scf00029g02914 Petunia axillaris HOM05D004381 ORTHO05D005200 6.4e-117 424.5 277 85.6
THA.LOC104817902 Tarenaya hassleriana HOM05D004381 ORTHO05D005200 1.9e-116 422.9 277 84.1
A05p27840 Brassica napus HOM05D004381 ORTHO05D005200 4.1e-116 421.8 274 83.2
Glyma.15G033500 Glycine max HOM05D004381 ORTHO05D005200 4.1e-116 421.8 277 83.4
Os02g0196000 Oryza sativa ssp. japonica HOM05D004381 ORTHO05D005200 9.2e-116 420.6 277 83.4
AT3G20870 Arabidopsis thaliana HOM05D004381 ORTHO05D005200 1.2e-115 420.2 277 81.9
BraA05t21671Z Brassica rapa HOM05D004381 ORTHO05D005200 1.6e-115 419.9 274 82.8
MSTRG.18417 Avicennia marina HOM05D004381 ORTHO05D005200 3.5e-115 418.7 277 84.1
Sed0000340 Sechium edule HOM05D004381 ORTHO05D005200 3.5e-115 418.7 277 84.8
MD03G1024300 Malus domestica HOM05D004381 ORTHO05D005200 6.0e-115 417.9 277 86.3
AL3G34820 Arabidopsis lyrata HOM05D004381 ORTHO05D005200 7.8e-115 417.5 277 81.9
Ah.06g193660 Amaranthus hybridus HOM05D004381 ORTHO05D005200 1.0e-114 417.2 278 82.7
MELO3C014607.2 Cucumis melo HOM05D004381 ORTHO05D005200 1.7e-114 416.4 277 84.8
Lj3g0004330 Lotus japonicus HOM05D004381 ORTHO05D005200 3.0e-114 415.6 277 82.3
CAN.G71.8 Capsicum annuum HOM05D004381 ORTHO05D005200 3.9e-114 415.2 283 83.0
Nn2g15439 Nelumbo nucifera HOM05D004381 ORTHO05D005200 8.6e-114 414.1 277 83.0
TWI60G0262 Tripterygium wilfordii HOM05D004381 ORTHO05D005200 1.1e-113 413.7 277 83.4
Oeu035739.1 Olea europaea HOM05D004381 ORTHO05D005200 1.9e-113 412.9 261 88.1
VMungo1080G0554 Vigna mungo HOM05D004381 ORTHO05D005200 2.5e-113 412.5 301 78.7
CARHR096750 Cardamine hirsuta HOM05D004381 ORTHO05D005200 9.5e-113 410.6 275 82.2
Aa31LG8G7690 Aethionema arabicum HOM05D004381 ORTHO05D005200 4.7e-112 408.3 280 82.5
C05p43180 Brassica napus HOM05D004381 ORTHO05D005200 4.7e-112 408.3 275 81.8
BolC5t33048H Brassica oleracea HOM05D004381 ORTHO05D005200 4.7e-112 408.3 275 81.8
HPP92_020510 Vanilla planifolia HOM05D004381 ORTHO05D005200 1.4e-111 406.8 277 82.7
Nitab4.5_0000492g0060 Nicotiana tabacum HOM05D004381 ORTHO05D005200 4.0e-111 405.2 261 86.6
Nitab4.5_0002026g0030 Nicotiana tabacum HOM05D004381 ORTHO05D005200 4.0e-111 405.2 261 86.6
Haze_23102 Corylus avellana HOM05D004381 ORTHO05D005200 1.5e-110 403.3 277 78.0
Sabra01G0013400 Salix brachista HOM05D004381 ORTHO05D005200 1.5e-110 403.3 321 72.9
SEGI_07837 Sequoiadendron giganteum HOM05D004381 ORTHO05D005200 1.3e-109 400.2 278 80.9
arahy.Tifrunner.gnm1.ann1.E88S00 Arachis hypogaea HOM05D004381 ORTHO05D005200 2.2e-109 399.4 319 72.1
EL10Ac4g10297 Beta vulgaris HOM05D004381 ORTHO05D005200 8.3e-109 397.5 270 83.7
Sabra03G0151600 Salix brachista HOM05D004381 ORTHO05D005200 5.4e-108 394.8 318 72.3
AUR62000098 Chenopodium quinoa HOM05D004381 ORTHO05D005200 1.2e-107 393.7 274 81.8
Carub.0003s2085 Capsella rubella HOM05D004381 ORTHO05D005200 3.5e-107 392.1 277 79.1
Lalb_Chr19g0138141 Lupinus albus HOM05D004381 ORTHO05D005200 3.5e-107 392.1 278 78.4
SGA_v2.0_scaffold247G44855 Striga asiatica HOM05D004381 ORTHO05D005200 3.9e-106 388.7 299 70.9
MSTRG.21390 Avicennia marina HOM05D004381 ORTHO05D005200 1.1e-105 387.1 277 79.1
Phvul.011G058500 Phaseolus vulgaris HOM05D004381 ORTHO05D005200 3.3e-105 385.6 275 77.8
MBI04_g13625_MAGBIO Magnolia biondii HOM05D004381 ORTHO05D005200 5.6e-105 384.8 278 77.3
Actinidia16315 Actinidia chinensis HOM05D004381 ORTHO05D005200 1.2e-104 383.6 318 67.0
Psat7g213080 Pisum sativum HOM05D004381 ORTHO05D005200 2.8e-104 382.5 273 78.4
ClCG02G023360 Citrullus lanatus HOM05D004381 ORTHO05D005200 4.7e-104 381.7 255 85.1
BcaC05g28200 Brassica carinata HOM05D004381 ORTHO05D005200 6.2e-104 381.3 274 72.6
ATR0605G196 Amborella trichopoda HOM05D004381 ORTHO05D005200 3.1e-103 379.0 264 80.7
AUR62019272 Chenopodium quinoa HOM05D004381 ORTHO05D005200 5.2e-103 378.3 269 75.5
Lj3g0009499 Lotus japonicus HOM05D004381 ORTHO05D005200 9.9e-102 374.0 278 75.9
Nn7g36163 Nelumbo nucifera HOM05D004381 ORTHO05D005200 9.9e-102 374.0 277 77.3
CDE10G0019 Ceratophyllum demersum HOM05D004381 ORTHO05D005200 1.3e-101 373.6 256 81.2
Zm00001eb205960 Zea mays HOM05D004381 ORTHO05D005200 1.7e-101 373.2 281 76.2
vmacro04193 Vaccinium macrocarpon HOM05D004381 ORTHO05D005200 8.4e-101 370.9 256 82.0
MBI01_g27615_MAGBIO Magnolia biondii HOM05D004381 ORTHO05D005200 2.7e-99 365.9 353 59.5
VMungo1127G1882 Vigna mungo HOM05D004381 ORTHO05D005200 2.7e-99 365.9 262 77.9
Medtr4g065640 Medicago truncatula HOM05D004381 ORTHO05D005200 3.5e-99 365.5 275 77.5
arahy.Tifrunner.gnm1.ann1.LPI13M Arachis hypogaea HOM05D004381 ORTHO05D005200 5.1e-98 361.7 259 78.0
arahy.Tifrunner.gnm1.ann1.T21L4I Arachis hypogaea HOM05D004381 ORTHO05D005200 1.2e-96 357.1 330 66.7
Duzib168G0673 Durio zibethinus HOM05D004381 ORTHO05D005200 1.1e-95 354.0 230 84.8
CsaV3_4G024140 Cucumis sativus L. HOM05D004381 ORTHO05D005200 1.5e-94 350.1 230 85.2
Dinv08032 Davidia involucrata HOM05D004381 ORTHO05D005200 2.2e-93 346.3 221 88.2
SMO347G0569 Selaginella moellendorffii HOM05D004381 ORTHO05D005200 7.8e-91 337.8 267 72.3
Sc06g0004510 Simmondsia chinensis HOM05D004381 ORTHO05D005200 2.3e-90 336.3 221 86.0
Zm00001eb213530 Zea mays HOM05D004381 ORTHO05D005200 6.6e-90 334.7 277 64.3
Mapoly0039s0091 Marchantia polymorpha HOM05D004381 ORTHO05D005200 3.3e-89 332.4 277 66.8
Ca_20572_v3 Cicer arietinum L. HOM05D004381 ORTHO05D005200 7.3e-89 331.3 250 76.8
Ca_30507_v3 Cicer arietinum L. HOM05D004381 ORTHO05D005200 7.3e-89 331.3 250 76.8
Lj1A348T17 Lonicera japonica HOM05D004381 ORTHO05D005200 4.0e-87 325.5 224 83.9
FAN25G0848 Fragaria x ananassa HOM05D004381 ORTHO05D005200 9.9e-86 320.9 315 64.4
Pp3c16_16530 Physcomitrium patens HOM05D004381 ORTHO05D005200 9.9e-86 320.9 282 66.7
AagrBONN_evm.TU.Sc2ySwM_362.691 Anthoceros agrestis HOM05D004381 ORTHO05D005200 8.4e-85 317.8 280 65.4
Glyma.11G132500 Glycine max HOM05D004381 ORTHO05D005200 6.6e-82 308.1 274 62.4
arahy.Tifrunner.gnm1.ann1.BUZ3KN Arachis hypogaea HOM05D004381 ORTHO05D005200 1.1e-81 307.4 274 66.4
arahy.Tifrunner.gnm1.ann1.N626J4 Arachis hypogaea HOM05D004381 ORTHO05D005200 1.3e-80 303.9 274 66.1
HanXRQChr17g0534131 Helianthus annuus HOM05D004381 ORTHO05D005200 3.4e-70 269.2 258 59.7
Glyma.12G056900 Glycine max HOM05D004381 ORTHO05D005200 6.0e-67 258.5 186 77.4
Os08g0100200 Oryza sativa ssp. japonica HOM05D004381 ORTHO05D005200 9.6e-65 251.1 274 53.3
arahy.Tifrunner.gnm1.ann1.H592TP Arachis hypogaea HOM05D004381 ORTHO05D005200 7.6e-62 241.5 279 52.3
TPR.G39903 Trifolium pratense HOM05D004381 ORTHO05D005200 1.3e-56 224.2 181 76.8
Psat1g173960 Pisum sativum HOM05D004381 ORTHO05D005200 3.1e-55 219.5 145 85.5
unitig_26.g10133 Utricularia gibba HOM05D004381 ORTHO05D005200 3.1e-55 219.5 155 72.3
Dinv36273 Davidia involucrata HOM05D004381 ORTHO05D005200 8.5e-53 211.5 138 80.4
Dinv36275 Davidia involucrata HOM05D004381 ORTHO05D005200 3.6e-51 206.1 129 81.4
Cpa.g.sc84.75 Carica papaya HOM05D004381 ORTHO05D005200 9.7e-49 198.0 132 78.0
Cre03.g189550 Chlamydomonas reinhardtii HOM05D004381 ORTHO05D005200 2.2e-48 196.8 301 46.8
TPR.G35036 Trifolium pratense HOM05D004381 ORTHO05D005200 6.7e-42 175.3 106 85.8
Psat5g287120 Pisum sativum HOM05D004381 ORTHO05D005200 1.7e-40 170.6 97 90.7
Oeu052046.2 Olea europaea HOM05D004381 ORTHO05D005200 9.1e-39 164.9 90 93.3
Hma1.2p1_0118F.1_g056480 Hydrangea macrophylla HOM05D004381 ORTHO05D005200 1.2e-33 147.9 84 89.3
TWI34G1572 Tripterygium wilfordii HOM05D004381 ORTHO05D005200 9.7e-33 144.8 152 55.3
Rhsim13G0223400 Rhododendron simsii HOM05D004381 ORTHO05D005200 2.9e-29 133.3 90 75.6
Gohir.D11G292000 Gossypium hirsutum HOM05D004381 ORTHO05D005200 7.2e-28 128.6 74 87.8
Gorai.007G316100 Gossypium raimondii HOM05D004381 ORTHO05D005200 7.2e-28 128.6 74 87.8
unitig_26.g10132 Utricularia gibba HOM05D004381 ORTHO05D005200 8.0e-27 125.2 80 78.8
MCO07G525 Micromonas commoda HOM05D004381 ORTHO05D005200 2.4e-23 113.6 258 37.2
CBR_g19660 Chara braunii HOM05D004381 ORTHO05D005200 1.5e-20 104.4 154 46.1
CBR_g37790 Chara braunii HOM05D004381 ORTHO05D005200 1.8e-18 97.4 149 47.0
PRCOL_00002167 Prasinoderma coloniale HOM05D004381 ORTHO05D005200 2.3e-18 97.1 154 41.6
CBR_g35021 Chara braunii HOM05D004381 ORTHO05D005200 8.8e-18 95.1 147 39.5
arahy.Tifrunner.gnm1.ann1.XL2GL1 Arachis hypogaea HOM05D004381 ORTHO05D005200 7.5e-17 92.0 71 83.1
Glyma.08G063100 Glycine max HOM05D004381 ORTHO05D005200 2.2e-16 90.5 57 77.2
arahy.Tifrunner.gnm1.ann1.9W75VL Arachis hypogaea HOM05D004381 ORTHO05D005200 2.8e-16 90.1 123 49.6
CBR_g37792 Chara braunii HOM05D004381 ORTHO05D005200 2.8e-16 90.1 179 37.4
MCO07G169 Micromonas commoda HOM05D004381 ORTHO05D005200 8.3e-16 88.6 156 41.0
arahy.Tifrunner.gnm1.ann1.0JWP28 Arachis hypogaea HOM05D004381 ORTHO05D005200 2.4e-15 87.0 71 76.1
Psat5g287160 Pisum sativum HOM05D004381 ORTHO05D005200 2.4e-15 87.0 73 69.9
Cre01.g066187 Chlamydomonas reinhardtii HOM05D004381 ORTHO05D005200 5.9e-14 82.4 155 34.8
Cre12.g530350 Chlamydomonas reinhardtii HOM05D004381 ORTHO05D005200 1.5e-12 77.8 157 41.4
MBI09_g41969_MAGBIO Magnolia biondii HOM05D004381 ORTHO05D005200 2.5e-12 77.0 45 86.7
arahy.Tifrunner.gnm1.ann1.W9WT0A Arachis hypogaea HOM05D000602 ORTHO05D011536 3.3e-12 76.6 46 76.1
Cre12.g530400 Chlamydomonas reinhardtii HOM05D004381 ORTHO05D005200 7.3e-12 75.5 159 39.0
PRCOL_00005627 Prasinoderma coloniale HOM05D004381 ORTHO05D005200 1.2e-11 74.7 268 31.7
arahy.Tifrunner.gnm1.ann1.T6H5I3 Arachis hypogaea HOM05D004381 ORTHO05D005200 4.7e-11 72.8 46 80.4
TPR.G33171 Trifolium pratense HOM05D004381 ORTHO05D005200 8.9e-10 68.6 40 85.0
Cre09.g392060 Chlamydomonas reinhardtii HOM05D004381 ORTHO05D005200 3.7e-08 63.2 140 42.1


User provided reference genes

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