Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5187 Papaver somniferum HOM05D005019 ORTHO05D006625 0.0e+00 1082.4 548 100.0
PSO210G0391 Papaver somniferum HOM05D005019 ORTHO05D006625 4.2e-306 1053.9 548 96.9
TAR633G0331 Trochodendron aralioides HOM05D005019 ORTHO05D006625 3.3e-210 735.3 558 69.0
GSVIVG01000726001 Vitis vinifera HOM05D005019 ORTHO05D006625 9.7e-210 733.8 555 68.8
Prupe.8G231800 Prunus persica HOM05D005019 ORTHO05D006625 4.1e-208 728.4 569 67.1
Dinv22477 Davidia involucrata HOM05D005019 ORTHO05D006625 1.7e-206 723.0 571 66.5
Actinidia21157 Actinidia chinensis HOM05D005019 ORTHO05D006625 3.2e-205 718.8 569 65.6
Cfa002330 Carpinus fangiana HOM05D005019 ORTHO05D006625 3.2e-205 718.8 569 66.4
CiPaw.03G257900 Carya illinoinensis HOM05D005019 ORTHO05D006625 3.6e-204 715.3 570 65.4
Cc02_g22310 Coffea canephora HOM05D005019 ORTHO05D006625 3.0e-203 712.2 558 65.6
TWI31G0602 Tripterygium wilfordii HOM05D005019 ORTHO05D006625 3.0e-203 712.2 566 66.8
FAN20G1740 Fragaria x ananassa HOM05D005019 ORTHO05D006625 6.7e-203 711.1 567 67.4
Dinv34572 Davidia involucrata HOM05D005019 ORTHO05D006625 4.4e-202 708.4 568 65.7
Prupe.5G054300 Prunus persica HOM05D005019 ORTHO05D006625 5.7e-202 708.0 569 65.7
RcHm_v2.0_Chr6g0289431 Rosa chinensis HOM05D005019 ORTHO05D006625 9.7e-202 707.2 569 66.4
FAN27G0650 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.7e-201 706.4 567 66.8
Lj1C59T1 Lonicera japonica HOM05D005019 ORTHO05D006625 2.2e-201 706.1 564 65.4
Manes.16G024300 Manihot esculenta HOM05D005019 ORTHO05D006625 2.2e-201 706.1 568 66.0
Nn7g37931 Nelumbo nucifera HOM05D005019 ORTHO05D006625 4.8e-201 704.9 555 66.7
FvH4_5g20520 Fragaria vesca HOM05D005019 ORTHO05D006625 1.1e-200 703.7 570 65.8
Ciclev10019516m.g Citrus clementina HOM05D005019 ORTHO05D006625 2.4e-200 702.6 568 64.1
Duzib147G1145 Durio zibethinus HOM05D005019 ORTHO05D006625 2.4e-200 702.6 567 65.6
Potri.005G218600 Populus trichocarpa HOM05D005019 ORTHO05D006625 9.1e-200 700.7 592 64.5
FAN24G1214 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.6e-199 699.9 564 66.5
Lalb_Chr19g0134621 Lupinus albus HOM05D005019 ORTHO05D006625 2.0e-199 699.5 558 65.8
Gorai.007G378500 Gossypium raimondii HOM05D005019 ORTHO05D006625 2.6e-199 699.1 570 65.4
Gohir.D11G348100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 4.5e-199 698.4 570 65.3
FAN18G2643 Fragaria x ananassa HOM05D005019 ORTHO05D006625 5.9e-199 698.0 569 65.4
ClCG02G012250 Citrullus lanatus HOM05D005019 ORTHO05D006625 1.3e-198 696.8 574 64.5
FvH4_2g22480 Fragaria vesca HOM05D005019 ORTHO05D006625 3.8e-198 695.3 549 67.6
Lj1P543T22 Lonicera japonica HOM05D005019 ORTHO05D006625 6.5e-198 694.5 489 71.2
Haze_24536 Corylus avellana HOM05D005019 ORTHO05D006625 1.5e-197 693.3 541 67.1
Gohir.D04G014300 Gossypium hirsutum HOM05D005019 ORTHO05D006625 1.5e-197 693.3 570 64.9
Gorai.012G016900 Gossypium raimondii HOM05D005019 ORTHO05D006625 1.9e-197 693.0 570 65.1
CANSAT35G0193 Cannabis sativa HOM05D005019 ORTHO05D006625 2.5e-197 692.6 569 65.2
Rhsim07G0080400 Rhododendron simsii HOM05D005019 ORTHO05D006625 2.5e-197 692.6 570 64.7
Eucgr.K03309 Eucalyptus grandis HOM05D005019 ORTHO05D006625 4.2e-197 691.8 570 63.5
FAN04G2884 Fragaria x ananassa HOM05D005019 ORTHO05D006625 5.5e-197 691.4 570 64.7
VMungo0540G2473 Vigna mungo HOM05D005019 ORTHO05D006625 7.2e-197 691.0 571 63.6
Lalb_Chr03g0030271 Lupinus albus HOM05D005019 ORTHO05D006625 9.4e-197 690.6 557 65.4
CsaV3_2G016400 Cucumis sativus L. HOM05D005019 ORTHO05D006625 1.6e-196 689.9 570 65.6
FAN15G0975 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.6e-196 689.9 564 66.1
Glyma.13G255400 Glycine max HOM05D005019 ORTHO05D006625 2.7e-196 689.1 567 64.0
Gohir.A11G329100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 2.7e-196 689.1 570 64.7
Psat1g046760 Pisum sativum HOM05D005019 ORTHO05D006625 4.7e-196 688.3 568 63.7
PGR044G0331 Punica granatum HOM05D005019 ORTHO05D006625 4.7e-196 688.3 563 64.1
MELO3C020849.2 Cucumis melo HOM05D005019 ORTHO05D006625 6.1e-196 688.0 570 64.9
Thecc.01G159500 Theobroma cacao HOM05D005019 ORTHO05D006625 8.0e-196 687.6 568 63.9
MD10G1192400 Malus domestica HOM05D005019 ORTHO05D006625 1.0e-195 687.2 572 65.2
Ca_00175_v3 Cicer arietinum L. HOM05D005019 ORTHO05D006625 6.8e-195 684.5 568 63.6
Sed0015889 Sechium edule HOM05D005019 ORTHO05D006625 8.8e-195 684.1 571 62.7
Psat1g214520 Pisum sativum HOM05D005019 ORTHO05D006625 1.2e-194 683.7 570 63.7
arahy.Tifrunner.gnm1.ann1.TZR8AU Arachis hypogaea HOM05D005019 ORTHO05D006625 1.5e-194 683.3 495 69.1
MD05G1205400 Malus domestica HOM05D005019 ORTHO05D006625 5.7e-194 681.4 568 64.1
GSVIVG01003806001 Vitis vinifera HOM05D005019 ORTHO05D006625 1.3e-193 680.2 555 64.9
Medtr2g009800 Medicago truncatula HOM05D005019 ORTHO05D006625 2.8e-193 679.1 567 63.7
Phvul.006G200700 Phaseolus vulgaris HOM05D005019 ORTHO05D006625 6.3e-193 677.9 569 63.4
Glyma.15G059400 Glycine max HOM05D005019 ORTHO05D006625 1.4e-192 676.8 569 63.1
Cpa.g.sc200.5 Carica papaya HOM05D005019 ORTHO05D006625 3.1e-192 675.6 564 63.3
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 4.1e-192 675.2 569 64.3
Medtr2g101620 Medicago truncatula HOM05D005019 ORTHO05D006625 5.3e-192 674.9 568 63.0
ECA247G2036 Erigeron canadensis HOM05D005019 ORTHO05D006625 9.1e-192 674.1 552 63.0
TPR.G9511 Trifolium pratense HOM05D005019 ORTHO05D006625 1.6e-191 673.3 565 62.7
MBI12_g17287_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 8.5e-190 667.5 561 63.8
HanXRQChr14g0454081 Helianthus annuus HOM05D005019 ORTHO05D006625 7.2e-189 664.5 554 63.5
Aqoxy6G01670 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 9.4e-189 664.1 580 62.1
Sc04g0003030 Simmondsia chinensis HOM05D005019 ORTHO05D006625 1.2e-188 663.7 568 61.8
EL10Ac5g11096 Beta vulgaris HOM05D005019 ORTHO05D006625 1.6e-188 663.3 572 62.1
Ah.02g113910 Amaranthus hybridus HOM05D005019 ORTHO05D006625 2.7e-188 662.5 578 61.2
Migut.N02183 Erythranthe guttata HOM05D005019 ORTHO05D006625 6.1e-188 661.4 571 61.5
ClCG07G000610 Citrullus lanatus HOM05D005019 ORTHO05D006625 8.0e-188 661.0 560 63.2
Aqoxy5G00344 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 1.4e-187 660.2 578 61.6
Lj1g0019097 Lotus japonicus HOM05D005019 ORTHO05D006625 1.4e-187 660.2 567 63.0
THA.LOC104806394 Tarenaya hassleriana HOM05D005019 ORTHO05D006625 2.3e-187 659.4 500 66.6
AT5G14050 Arabidopsis thaliana HOM05D005019 ORTHO05D006625 4.0e-187 658.7 554 63.7
Carub.0006s1224 Capsella rubella HOM05D005019 ORTHO05D006625 6.8e-187 657.9 562 62.1
CARHR199310 Cardamine hirsuta HOM05D005019 ORTHO05D006625 1.2e-186 657.1 556 61.7
Atru.chr5.1578 Acer truncatum HOM05D005019 ORTHO05D006625 1.5e-186 656.8 569 60.3
AUR62008493 Chenopodium quinoa HOM05D005019 ORTHO05D006625 4.4e-186 655.2 570 62.3
Sp6g29950 Schrenkiella parvula HOM05D005019 ORTHO05D006625 7.5e-186 654.4 555 62.7
Aa31LG11G14850 Aethionema arabicum HOM05D005019 ORTHO05D006625 1.7e-185 653.3 558 62.5
AL6G24710 Arabidopsis lyrata HOM05D005019 ORTHO05D006625 1.7e-185 653.3 550 63.1
Thhalv10013183m.g Eutrema salsugineum HOM05D005019 ORTHO05D006625 4.9e-185 651.7 556 62.2
Lsat_1_v5_gn_8_3120 Lactuca sativa HOM05D005019 ORTHO05D006625 1.8e-184 649.8 552 62.3
PGSC0003DMG400023686 Solanum tuberosum HOM05D005019 ORTHO05D006625 1.8e-184 649.8 553 62.6
AUR62037688 Chenopodium quinoa HOM05D005019 ORTHO05D006625 3.1e-184 649.0 571 61.6
Lsat_1_v5_gn_9_9921 Lactuca sativa HOM05D005019 ORTHO05D006625 5.4e-184 648.3 557 60.5
SalBow6G4122 Salvia bowleyana HOM05D005019 ORTHO05D006625 7.0e-184 647.9 541 61.2
Gohir.A05G401500 Gossypium hirsutum HOM05D005019 ORTHO05D006625 3.5e-183 645.6 572 62.6
HPP92_026109 Vanilla planifolia HOM05D005019 ORTHO05D006625 1.0e-182 644.0 503 65.8
DCAR_002684 Daucus carota HOM05D005019 ORTHO05D006625 1.3e-182 643.7 570 61.2
Nitab4.5_0010414g0010 Nicotiana tabacum HOM05D005019 ORTHO05D006625 1.5e-181 640.2 503 65.6
SalBow3G3235 Salvia bowleyana HOM05D005019 ORTHO05D006625 1.9e-181 639.8 576 58.9
Sopen10g030790 Solanum pennellii HOM05D005019 ORTHO05D006625 5.5e-181 638.3 507 64.9
Nitab4.5_0008299g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 9.5e-181 637.5 503 65.2
Nitab4.5_0003006g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 1.0e-179 634.0 503 65.2
Peaxi162Scf00045g00177 Petunia axillaris HOM05D005019 ORTHO05D006625 1.4e-179 633.6 568 60.4
MSTRG.12540 Avicennia marina HOM05D005019 ORTHO05D006625 4.0e-179 632.1 571 58.3
Solyc10g080180.3 Solanum lycopersicum HOM05D005019 ORTHO05D006625 6.8e-179 631.3 501 65.1
Lj6g0023367 Lotus japonicus HOM05D005019 ORTHO05D006625 1.2e-178 630.6 563 60.9
AUR62021601 Chenopodium quinoa HOM05D005019 ORTHO05D006625 1.5e-178 630.2 563 61.3
ATR0564G197 Amborella trichopoda HOM05D005019 ORTHO05D006625 2.6e-178 629.4 573 58.3
RcHm_v2.0_Chr7g0205871 Rosa chinensis HOM05D005019 ORTHO05D006625 3.4e-178 629.0 429 73.0
Oeu018172.1 Olea europaea HOM05D005019 ORTHO05D006625 2.8e-177 625.9 568 59.2
Nitab4.5_0001370g0040 Nicotiana tabacum HOM05D005019 ORTHO05D006625 6.3e-177 624.8 501 64.7
vmacro14869 Vaccinium macrocarpon HOM05D005019 ORTHO05D006625 4.1e-176 622.1 558 60.2
CSS0021329 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 7.8e-175 617.8 570 58.9
Hund02608 Selenicereus undatus HOM05D005019 ORTHO05D006625 1.5e-173 613.6 547 60.3
Zm00001eb227850 Zea mays HOM05D005019 ORTHO05D006625 7.3e-173 611.3 559 57.6
SGA_v2.0_scaffold80G25914 Striga asiatica HOM05D005019 ORTHO05D006625 1.2e-172 610.5 513 61.0
AUR62025557 Chenopodium quinoa HOM05D005019 ORTHO05D006625 5.2e-171 605.1 513 61.6
Os07g0603200 Oryza sativa ssp. japonica HOM05D005019 ORTHO05D006625 4.3e-165 585.5 560 56.6
CDE04G3201 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 1.1e-163 580.9 435 65.3
SHI13722 Sapria himalayana HOM05D005019 ORTHO05D006625 1.5e-162 577.0 499 60.1
Thecc.05G016300 Theobroma cacao HOM05D005019 ORTHO05D006625 3.4e-162 575.9 423 68.1
Hma1.2p1_1029F.1_g249600 Hydrangea macrophylla HOM05D005019 ORTHO05D006625 1.1e-160 570.9 343 79.9
HPP92_022900 Vanilla planifolia HOM05D005019 ORTHO05D006625 4.0e-155 552.4 383 71.3
unitig_8.g4702 Utricularia gibba HOM05D005019 ORTHO05D006625 4.4e-154 548.9 573 52.4
SEGI_19346 Sequoiadendron giganteum HOM05D005019 ORTHO05D006625 5.8e-154 548.5 540 56.3
Ciclev10006829m.g Citrus clementina HOM05D005019 ORTHO05D006625 1.6e-151 540.4 489 61.1
AagrBONN_evm.TU.Sc2ySwM_362.2571 Anthoceros agrestis HOM05D005019 ORTHO05D006625 9.0e-139 498.0 527 50.1
CDE02G2819 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 6.4e-137 491.9 464 58.0
Mapoly0051s0055 Marchantia polymorpha HOM05D005019 ORTHO05D006625 1.9e-133 480.3 515 48.3
Rhsim01G0269300 Rhododendron simsii HOM05D005019 ORTHO05D006625 7.6e-122 441.8 259 79.5
SMO356G0724 Selaginella moellendorffii HOM05D005019 ORTHO05D006625 7.6e-122 441.8 521 47.2
CBR_g21842 Chara braunii HOM05D005019 ORTHO05D006625 1.8e-118 430.6 534 42.3
QL02p075842 Quercus lobata HOM05D005019 ORTHO05D006625 6.9e-115 418.7 519 47.0
Pp3c26_4890 Physcomitrium patens HOM05D005019 ORTHO05D006625 1.2e-114 417.9 491 45.0
AUR62008687 Chenopodium quinoa HOM05D005019 ORTHO05D006625 4.5e-98 362.8 503 45.1
Actinidia24938 Actinidia chinensis HOM05D005019 ORTHO05D006625 7.2e-96 355.5 452 47.1
MBI17_g40264_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 2.4e-91 340.5 284 64.8
AagrBONN_evm.TU.Sc2ySwM_228.5554 Anthoceros agrestis HOM05D005019 ORTHO05D006625 5.0e-89 332.8 299 54.2
Cre06.g255950 Chlamydomonas reinhardtii HOM05D005019 ORTHO05D006625 1.6e-87 327.8 470 40.2
CSS0011909 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 8.8e-86 322.0 489 42.3
MBI17_g13392_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D012924 1.6e-82 311.2 367 50.1
MCO01G264 Micromonas commoda HOM05D005019 ORTHO05D006625 2.7e-74 283.9 444 38.5
PRCOL_00000196 Prasinoderma coloniale HOM05D005019 ORTHO05D006625 7.5e-69 265.8 326 41.4
BcaNung06034 Brassica carinata HOM05D005019 ORTHO05D006625 5.4e-67 259.6 240 59.6
TAR383G0651 Trochodendron aralioides HOM05D005019 ORTHO05D006625 3.8e-65 253.4 560 35.2
BcaB01g06348 Brassica carinata HOM05D005019 ORTHO05D006625 4.3e-40 170.2 264 41.7
Cfa024923 Carpinus fangiana HOM05D005019 ORTHO05D126389 2.1e-34 151.4 513 24.8
MD05G1205300 Malus domestica HOM05D005019 ORTHO05D048639 7.8e-26 122.9 143 49.7
QL02p076237 Quercus lobata HOM05D005019 ORTHO05D006625 6.7e-17 93.2 92 62.0
Zm00001eb227870 Zea mays HOM05D005019 ORTHO05D048639 2.9e-12 77.8 84 47.6


User provided reference genes

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