Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 0.0e+00 1317.0 658 100.0
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 5.5e-252 874.4 666 69.4
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 1.3e-245 853.2 665 68.0
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 8.0e-243 844.0 661 66.3
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 1.3e-240 836.6 643 68.3
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 9.1e-239 830.5 659 65.9
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 2.1e-235 819.3 660 64.4
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 4.0e-234 815.1 669 65.2
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 5.7e-233 811.2 662 65.0
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 1.3e-232 810.1 659 65.7
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 2.9e-232 808.9 601 70.0
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 4.9e-232 808.1 672 62.9
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 2.4e-231 805.8 670 64.0
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 1.2e-230 803.5 666 63.4
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 2.0e-230 802.7 663 64.1
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 1.7e-229 799.7 663 63.0
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 5.0e-229 798.1 664 64.6
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 1.9e-228 796.2 663 64.1
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 1.8e-226 789.6 655 64.0
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 1.2e-225 786.9 659 63.7
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 1.5e-225 786.6 660 62.9
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 5.8e-225 784.6 671 63.2
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 7.5e-225 784.3 663 62.6
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 9.8e-225 783.9 663 62.4
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 1.1e-223 780.4 669 62.6
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 3.2e-223 778.9 661 62.6
Duzib211G0477 Durio zibethinus HOM05D003691 ORTHO05D004288 4.1e-223 778.5 663 62.7
FAN14G5114 Fragaria x ananassa HOM05D003691 ORTHO05D004288 4.1e-223 778.5 667 62.4
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 4.1e-223 778.5 660 61.2
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 4.1e-223 778.5 677 61.0
FAN05G1959 Fragaria x ananassa HOM05D003691 ORTHO05D004288 7.8e-222 774.2 668 61.5
RcHm_v2.0_Chr2g0158621 Rosa chinensis HOM05D003691 ORTHO05D004288 7.8e-222 774.2 675 61.8
FAN09G0430 Fragaria x ananassa HOM05D003691 ORTHO05D004288 3.3e-220 768.8 659 61.6
FvH4_6g42730 Fragaria vesca HOM05D003691 ORTHO05D004288 4.7e-219 765.0 677 61.0
THA.LOC104816038 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 6.2e-219 764.6 669 62.2
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 2.3e-218 762.7 660 61.7
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 4.4e-217 758.4 663 60.5
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 9.8e-217 757.3 665 61.7
Thecc.07G031000 Theobroma cacao HOM05D003691 ORTHO05D004288 1.3e-216 756.9 665 60.8
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 5.4e-215 751.5 661 60.7
FAN02G0990 Fragaria x ananassa HOM05D003691 ORTHO05D004288 6.0e-214 748.0 667 60.6
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 1.3e-213 746.9 669 59.8
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 3.9e-213 745.3 676 59.2
Glyma.12G096700 Glycine max HOM05D003691 ORTHO05D004288 6.6e-213 744.6 664 59.9
Medtr4g050060 Medicago truncatula HOM05D003691 ORTHO05D004288 3.3e-212 742.3 666 59.0
AL4G27990 Arabidopsis lyrata HOM05D003691 ORTHO05D004288 5.6e-212 741.5 670 60.0
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 2.1e-211 739.6 661 60.2
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 2.8e-211 739.2 647 60.0
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 2.8e-211 739.2 661 60.2
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 3.6e-211 738.8 671 59.3
Thhalv10016359m.g Eutrema salsugineum HOM05D003691 ORTHO05D004288 6.2e-211 738.0 670 60.4
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 8.1e-211 737.6 671 59.3
TPR.G4630 Trifolium pratense HOM05D003691 ORTHO05D004288 1.8e-210 736.5 675 58.8
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 2.3e-210 736.1 659 59.5
Migut.M00432 Erythranthe guttata HOM05D003691 ORTHO05D004288 2.3e-210 736.1 668 60.3
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 4.0e-210 735.3 664 59.2
Carub.0004s1392 Capsella rubella HOM05D003691 ORTHO05D004288 6.8e-210 734.6 670 60.1
Atru.chr2.3500 Acer truncatum HOM05D003691 ORTHO05D004288 1.2e-209 733.8 673 59.3
CARHR126440 Cardamine hirsuta HOM05D003691 ORTHO05D004288 2.0e-209 733.0 676 59.6
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 4.4e-209 731.9 665 59.2
Hund02023 Selenicereus undatus HOM05D003691 ORTHO05D004288 1.7e-208 729.9 711 57.4
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 2.2e-208 729.6 662 60.1
A05p13290 Brassica napus HOM05D003691 ORTHO05D004288 4.9e-208 728.4 670 59.6
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 4.9e-208 728.4 656 59.6
AT2G32590 Arabidopsis thaliana HOM05D003691 ORTHO05D004288 8.4e-208 727.6 673 59.7
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 1.4e-207 726.9 664 59.3
BraA04t18015Z Brassica rapa HOM05D003691 ORTHO05D004288 2.4e-207 726.1 674 59.9
Sp4g14920 Schrenkiella parvula HOM05D003691 ORTHO05D004288 2.4e-207 726.1 670 59.6
C04p17080 Brassica napus HOM05D003691 ORTHO05D004288 7.1e-207 724.5 672 59.1
BraA05t20270Z Brassica rapa HOM05D003691 ORTHO05D004288 1.6e-206 723.4 671 59.6
Lj3g0007999 Lotus japonicus HOM05D003691 ORTHO05D004288 1.6e-206 723.4 664 58.3
A04p25040 Brassica napus HOM05D003691 ORTHO05D004288 3.5e-206 722.2 672 59.4
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 6.0e-206 721.5 664 58.4
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 2.5e-204 716.1 663 58.5
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 3.3e-204 715.7 660 58.9
BolC4t23260H Brassica oleracea HOM05D003691 ORTHO05D004288 4.3e-204 715.3 687 57.8
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 2.8e-203 712.6 660 58.3
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 2.8e-203 712.6 659 58.6
Sc12g0002210 Simmondsia chinensis HOM05D003691 ORTHO05D004288 4.7e-203 711.8 674 57.9
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 1.1e-202 710.7 660 58.8
Psat7g203760 Pisum sativum HOM05D003691 ORTHO05D004288 2.4e-202 709.5 667 57.6
DCAR_021155 Daucus carota HOM05D003691 ORTHO05D004288 1.2e-201 707.2 660 57.9
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 7.6e-201 704.5 663 57.8
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 2.2e-200 703.0 667 58.0
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 2.9e-200 702.6 693 58.0
Aa31LG5G4740 Aethionema arabicum HOM05D003691 ORTHO05D004288 7.1e-199 698.0 673 57.8
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 2.1e-198 696.4 664 56.9
EL10Ac4g07751 Beta vulgaris HOM05D003691 ORTHO05D004288 1.3e-197 693.7 681 54.8
AUR62015833 Chenopodium quinoa HOM05D003691 ORTHO05D004288 2.3e-197 693.0 695 56.0
Cc05_g03670 Coffea canephora HOM05D003691 ORTHO05D004288 6.6e-197 691.4 700 55.0
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 6.6e-197 691.4 665 57.0
Glyma.12G191300 Glycine max HOM05D003691 ORTHO05D004288 1.1e-196 690.6 674 56.2
Ca_19493_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 9.6e-196 687.6 672 56.0
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 1.6e-195 686.8 662 56.6
ATR0317G123 Amborella trichopoda HOM05D003691 ORTHO05D004288 6.2e-195 684.9 652 58.7
Phvul.005G116900 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 6.2e-195 684.9 661 55.7
THA.LOC104826143 Tarenaya hassleriana HOM05D003691 ORTHO05D004288 1.4e-194 683.7 683 57.0
Ciclev10007620m.g Citrus clementina HOM05D003691 ORTHO05D004288 2.6e-193 679.5 696 55.2
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 4.4e-193 678.7 671 55.6
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 1.7e-192 676.8 579 62.5
Ah.06g182530 Amaranthus hybridus HOM05D003691 ORTHO05D004288 5.4e-191 671.8 688 54.9
Medtr2g087880 Medicago truncatula HOM05D003691 ORTHO05D004288 5.4e-191 671.8 667 54.4
VMungo1080G0849 Vigna mungo HOM05D003691 ORTHO05D004288 7.9e-190 667.9 656 55.5
HanXRQChr04g0126971 Helianthus annuus HOM05D003691 ORTHO05D004288 3.0e-189 666.0 671 56.5
FvH4_3g23280 Fragaria vesca HOM05D003691 ORTHO05D004288 6.6e-189 664.8 645 56.0
Lsat_1_v5_gn_7_93200 Lactuca sativa HOM05D003691 ORTHO05D004288 4.3e-188 662.1 671 55.9
TPR.G4243 Trifolium pratense HOM05D003691 ORTHO05D004288 9.6e-188 661.0 684 53.8
RcHm_v2.0_Chr5g0041001 Rosa chinensis HOM05D003691 ORTHO05D004288 1.3e-187 660.6 645 55.2
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 6.2e-187 658.3 717 51.3
Psat5g261240 Pisum sativum HOM05D003691 ORTHO05D004288 8.1e-187 657.9 664 54.7
HPP92_023149 Vanilla planifolia HOM05D003691 ORTHO05D004288 3.8e-184 649.0 653 55.0
Ca_01616_v3 Cicer arietinum L. HOM05D003691 ORTHO05D004288 4.2e-183 645.6 695 52.2
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 3.3e-180 636.0 594 56.6
Zm00001eb162990 Zea mays HOM05D003691 ORTHO05D004288 4.0e-178 629.0 645 52.6
FAN21G2044 Fragaria x ananassa HOM05D003691 ORTHO05D004288 6.9e-178 628.2 645 54.7
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 9.0e-178 627.9 633 54.5
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 1.5e-177 627.1 661 53.6
Lsat_1_v5_gn_9_106740 Lactuca sativa HOM05D003691 ORTHO05D004288 2.0e-177 626.7 659 53.9
GSVIVG01037701001 Vitis vinifera HOM05D003691 ORTHO05D004288 2.1e-174 616.7 649 53.8
Cpa.g.sc87.104 Carica papaya HOM05D003691 ORTHO05D004288 6.7e-173 611.7 513 62.8
Hund02022 Selenicereus undatus HOM05D003691 ORTHO05D004288 2.3e-165 586.6 683 51.1
BcaB06g28606 Brassica carinata HOM05D003691 ORTHO05D004288 8.7e-165 584.7 671 52.3
BcaB06g28605 Brassica carinata HOM05D003691 ORTHO05D004288 3.3e-164 582.8 648 53.4
AUR62020387 Chenopodium quinoa HOM05D003691 ORTHO05D004288 2.0e-161 573.5 673 50.2
FAN11G2344 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.2e-160 570.1 582 53.3
Hund02025 Selenicereus undatus HOM05D003691 ORTHO05D004288 3.8e-160 569.3 683 50.1
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 1.1e-159 567.8 496 59.9
BcaB02g10460 Brassica carinata HOM05D003691 ORTHO05D004288 3.6e-158 562.8 509 60.7
CiPaw.11G193000 Carya illinoinensis HOM05D003691 ORTHO05D004288 4.1e-154 549.3 502 58.4
COL.COLO4_09704 Corchorus olitorius HOM05D003691 ORTHO05D004288 1.7e-147 527.3 495 59.2
Dinv22243 Davidia involucrata HOM05D003691 ORTHO05D004288 4.8e-147 525.8 543 55.8
BolC4t27689H Brassica oleracea HOM05D003691 ORTHO05D004288 5.5e-143 512.3 531 55.0
unitig_60.g25819 Utricularia gibba HOM05D003691 ORTHO05D004288 1.8e-138 497.3 644 46.9
AUR62015832 Chenopodium quinoa HOM05D003691 ORTHO05D004288 6.3e-131 472.2 588 48.0
C04p62100 Brassica napus HOM05D003691 ORTHO05D004288 4.1e-130 469.5 460 58.0
Gohir.A07G186000 Gossypium hirsutum HOM05D003691 ORTHO05D004288 8.5e-128 461.8 445 57.5
BcaC02g07908 Brassica carinata HOM05D003691 ORTHO05D004288 2.0e-121 440.7 649 44.4
Lj8A171G44 Lonicera japonica HOM05D003691 ORTHO05D004288 2.3e-120 437.2 491 52.1
Pp3c11_22430 Physcomitrium patens HOM05D003691 ORTHO05D004288 8.9e-117 425.2 694 40.3
SEGI_30766 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 8.9e-117 425.2 572 47.0
Actinidia10811 Actinidia chinensis HOM05D003691 ORTHO05D004288 1.8e-114 417.5 439 53.8
Mapoly0002s0133 Marchantia polymorpha HOM05D003691 ORTHO05D004288 2.7e-113 413.7 681 40.5
AagrBONN_evm.TU.Sc2ySwM_228.2537 Anthoceros agrestis HOM05D003691 ORTHO05D004288 1.1e-106 391.7 687 39.6
AUR62020385 Chenopodium quinoa HOM05D003691 ORTHO05D004288 1.9e-106 391.0 308 65.9
SEGI_37895 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 1.5e-100 371.3 577 43.2
Lalb_Chr19g0136071 Lupinus albus HOM05D003691 ORTHO05D004288 1.9e-98 364.4 371 55.5
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 3.0e-96 357.1 398 49.2
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 4.3e-95 353.2 265 69.4
FAN25G2100 Fragaria x ananassa HOM05D003691 ORTHO05D004288 8.9e-93 345.5 290 63.8
CBR_g26183 Chara braunii HOM05D003691 ORTHO05D004288 7.1e-90 335.9 775 35.7
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 6.6e-88 329.3 279 59.5
Pp3c7_4280 Physcomitrium patens HOM05D003691 ORTHO05D004288 1.4e-85 321.6 691 36.6
FAN25G2879 Fragaria x ananassa HOM05D003691 ORTHO05D004288 1.7e-80 304.7 340 49.7
Os01g0532800 Oryza sativa ssp. japonica HOM05D003691 ORTHO05D004288 7.3e-79 299.3 315 48.3
MCO04G245 Micromonas commoda HOM05D003691 ORTHO05D004288 7.9e-73 279.3 626 34.5
PRCOL_00002032 Prasinoderma coloniale HOM05D003691 ORTHO05D004288 2.9e-67 260.8 617 33.2
MD17G1101300 Malus domestica HOM05D003691 ORTHO05D004288 4.3e-63 246.9 259 56.0
SHI10368 Sapria himalayana HOM05D003691 ORTHO05D004288 1.6e-62 245.0 406 39.9
Actinidia10812 Actinidia chinensis HOM05D003691 ORTHO05D004288 2.6e-52 211.1 202 57.4
CDE09G1127 Ceratophyllum demersum HOM05D003691 ORTHO05D004288 3.0e-48 197.6 155 68.4
Lj8A171G43 Lonicera japonica HOM05D003691 ORTHO05D004288 2.9e-43 181.0 131 63.4
Cfa026695 Carpinus fangiana HOM05D003691 ORTHO05D004288 5.1e-40 170.2 708 27.8
Sed0010458 Sechium edule HOM05D003691 ORTHO05D004288 2.6e-36 157.9 257 41.6
MD03G1195600 Malus domestica HOM05D003691 ORTHO05D004288 2.6e-31 141.4 165 52.7
C04p62090 Brassica napus HOM05D003691 ORTHO05D004288 1.9e-26 125.2 127 55.9
SEGI_16706 Sequoiadendron giganteum HOM05D003691 ORTHO05D017750 4.2e-26 124.0 114 57.9
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 8.0e-25 119.8 81 67.9
CAN.G574.39 Capsicum annuum HOM05D003691 ORTHO05D004288 2.0e-20 105.1 88 60.2
arahy.Tifrunner.gnm1.ann1.NAA2I0 Arachis hypogaea HOM05D003691 ORTHO05D004288 3.8e-19 100.9 61 82.0
SEGI_15855 Sequoiadendron giganteum HOM05D003691 ORTHO05D004288 1.9e-18 98.6 110 50.9
ATR0772G025 Amborella trichopoda HOM05D003691 ORTHO05D004288 2.1e-17 95.1 117 47.0
CAN.G574.40 Capsicum annuum HOM05D003691 ORTHO05D004288 6.1e-17 93.6 68 64.7
EL10Ac4g08622 Beta vulgaris HOM05D003691 ORTHO05D019836 8.0e-17 93.2 139 40.3
SHI10371 Sapria himalayana HOM05D003691 ORTHO05D004288 3.4e-15 87.8 91 59.3
FAN16G1928 Fragaria x ananassa HOM05D003691 ORTHO05D004288 2.4e-13 81.6 94 50.0
SHI10370 Sapria himalayana HOM05D000105 ORTHO05D000023 3.5e-12 77.8 62 64.5
MD17G1101200 Malus domestica HOM05D003691 ORTHO05D004288 1.1e-10 72.8 89 44.9
Rhsim07G0255900 Rhododendron simsii HOM05D000234 ORTHO05D004288 1.1e-10 72.8 132 36.4
TPR.G35222 Trifolium pratense HOM05D003691 ORTHO05D004288 3.2e-10 71.2 59 59.3
Glyma.13G310451 Glycine max HOM05D003691 ORTHO05D004288 4.7e-09 67.4 49 65.3
Lj8A127T49 Lonicera japonica HOM05D003691 ORTHO05D004288 6.1e-09 67.0 75 54.7
Actinidia03601 Actinidia chinensis HOM05D003691 ORTHO05D004288 8.0e-09 66.6 49 65.3
TPR.G2961 Trifolium pratense HOM05D001978 ORTHO05D003036 1.8e-08 65.5 48 62.5
Dinv17119 Davidia involucrata HOM05D003691 ORTHO05D004288 3.0e-08 64.7 83 48.2
Cre13.g589300 Chlamydomonas reinhardtii HOM05D003691 ORTHO05D004288 2.6e-07 61.6 184 25.5
MD17G1101000 Malus domestica HOM05D003691 ORTHO05D004288 9.8e-07 59.7 46 56.5
Dinv18681 Davidia involucrata HOM05D003691 ORTHO05D004288 4.9e-06 57.4 33 78.8


User provided reference genes

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