Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 7.2e-68 260.4 125 100.0
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 6.7e-66 253.8 125 97.6
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 2.8e-56 221.9 125 84.8
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 4.1e-55 218.0 125 82.4
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 4.2e-52 208.0 125 79.2
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 3.0e-50 201.8 125 76.8
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 3.0e-50 201.8 125 75.2
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 3.0e-50 201.8 125 75.2
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 4.0e-50 201.4 125 76.8
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 4.0e-50 201.4 125 76.8
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 5.2e-50 201.1 125 72.8
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 8.8e-50 200.3 125 74.4
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 8.8e-50 200.3 125 74.4
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 8.8e-50 200.3 125 74.4
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 1.2e-49 199.9 125 74.4
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 1.5e-49 199.5 125 75.2
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 1.5e-49 199.5 125 74.4
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 2.0e-49 199.1 125 74.4
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 2.0e-49 199.1 125 74.4
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 2.0e-49 199.1 125 72.8
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 2.6e-49 198.7 125 75.2
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 3.3e-49 198.4 124 74.2
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 3.3e-49 198.4 124 74.2
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 4.4e-49 198.0 125 72.8
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 4.4e-49 198.0 125 73.6
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 4.4e-49 198.0 125 74.4
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 7.5e-49 197.2 125 73.6
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 7.5e-49 197.2 125 73.6
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 7.5e-49 197.2 125 72.8
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 9.7e-49 196.8 125 72.0
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 9.7e-49 196.8 125 73.6
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 1.3e-48 196.4 125 72.8
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 1.7e-48 196.1 125 72.0
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 2.2e-48 195.7 124 74.2
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 2.2e-48 195.7 125 72.0
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 2.2e-48 195.7 125 72.8
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 6.3e-48 194.1 125 70.4
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 6.3e-48 194.1 125 73.6
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 6.3e-48 194.1 125 71.2
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 8.2e-48 193.7 125 74.4
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 8.2e-48 193.7 125 72.0
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 8.2e-48 193.7 125 72.8
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 8.2e-48 193.7 125 71.2
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 1.1e-47 193.4 125 70.4
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 1.8e-47 192.6 125 73.6
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 2.4e-47 192.2 125 69.6
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 3.1e-47 191.8 125 72.8
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 3.1e-47 191.8 125 70.4
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 4.1e-47 191.4 125 72.0
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 5.3e-47 191.0 125 70.4
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 9.1e-47 190.3 125 72.0
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 9.1e-47 190.3 125 69.6
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 1.6e-46 189.5 125 72.0
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 2.7e-46 188.7 125 70.4
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.7e-46 188.7 125 72.8
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 2.7e-46 188.7 125 72.8
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 3.5e-46 188.3 125 70.4
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 1.0e-45 186.8 125 72.0
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.0e-45 186.8 125 71.2
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.0e-45 186.8 125 72.0
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.0e-45 186.8 125 72.0
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 1.0e-45 186.8 125 72.0
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.3e-45 186.4 132 67.4
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.9e-45 185.3 137 64.2
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 5.0e-45 184.5 125 69.6
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 6.5e-45 184.1 125 70.4
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 6.5e-45 184.1 125 70.4
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 8.5e-45 183.7 125 71.2
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 2.5e-44 182.2 125 70.4
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 2.5e-44 182.2 125 67.2
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 4.2e-44 181.4 125 68.0
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 4.2e-44 181.4 125 69.6
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 7.2e-44 180.6 122 66.4
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 9.4e-44 180.3 125 70.4
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 9.4e-44 180.3 125 70.4
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 1.2e-43 179.9 125 68.0
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 4.7e-43 177.9 125 68.0
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 6.1e-43 177.6 125 67.2
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 8.0e-43 177.2 125 69.6
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 1.0e-42 176.8 125 69.6
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 1.8e-42 176.0 125 68.8
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 4.0e-42 174.9 125 64.8
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 6.8e-42 174.1 101 80.2
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 8.8e-42 173.7 125 66.4
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 1.2e-41 173.3 125 64.8
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 2.6e-41 172.2 125 64.8
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 2.6e-41 172.2 124 65.3
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 4.4e-41 171.4 125 63.2
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 5.7e-41 171.0 123 63.4
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 5.7e-41 171.0 123 63.4
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 2.2e-40 169.1 108 70.4
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 2.8e-40 168.7 150 58.0
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 4.8e-40 167.9 125 65.6
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 4.8e-40 167.9 204 47.1
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 6.3e-40 167.5 125 60.8
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 8.3e-40 167.2 172 52.3
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 1.4e-39 166.4 125 62.4
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 5.4e-39 164.5 101 74.3
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 7.0e-39 164.1 125 62.4
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 2.0e-38 162.5 125 62.4
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 3.5e-38 161.8 101 73.3
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 4.5e-38 161.4 125 62.4
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 7.7e-38 160.6 125 60.8
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 5.0e-37 157.9 120 61.7
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 1.1e-36 156.8 125 60.0
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 1.1e-36 156.8 125 60.0
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.1e-36 156.8 101 70.3
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 8.0e-35 150.6 126 59.5
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 8.0e-35 150.6 113 57.5
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 1.0e-34 150.2 121 59.5
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 6.8e-34 147.5 127 59.1
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 1.9e-23 112.8 81 64.2
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 1.9e-23 112.8 81 64.2
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 5.0e-21 104.8 81 59.3
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 3.6e-19 98.6 82 58.5
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 8.0e-19 97.4 108 50.0
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 1.8e-18 96.3 66 68.2
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 5.2e-18 94.7 79 58.2
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 5.2e-18 94.7 79 58.2
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.2e-16 89.4 57 64.9
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.2e-16 89.4 57 64.9
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 3.5e-14 82.0 68 63.2
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 1.0e-13 80.5 52 63.5
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 1.3e-13 80.1 57 61.4
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 3.3e-12 75.5 65 58.5
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 7.3e-12 74.3 45 80.0
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 1.6e-11 73.2 44 81.8
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 5.8e-09 64.7 44 75.0
SMO230G0118 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 7.8e-06 54.3 40 65.0


User provided reference genes

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