Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G5017 Papaver somniferum HOM05D004996 ORTHO05D005844 2.6e-175 618.6 318 100.0
PSO170G3325 Papaver somniferum HOM05D004996 ORTHO05D005844 2.5e-165 585.5 318 94.3
TAR376G0493 Trochodendron aralioides HOM05D004996 ORTHO05D005844 1.6e-95 353.6 315 60.3
Aqoxy5G01233 Aquilegia oxysepala HOM05D004996 ORTHO05D005844 1.7e-89 333.6 319 59.6
Cfa004020 Carpinus fangiana HOM05D004996 ORTHO05D005844 2.2e-89 333.2 316 53.5
COL.COLO4_11407 Corchorus olitorius HOM05D004996 ORTHO05D005844 5.5e-88 328.6 266 58.6
Prupe.7G133700 Prunus persica HOM05D004996 ORTHO05D005844 5.5e-88 328.6 320 53.8
Duzib147G0592 Durio zibethinus HOM05D004996 ORTHO05D005844 9.3e-88 327.8 303 55.1
FvH4_7g06480 Fragaria vesca HOM05D004996 ORTHO05D005844 1.6e-87 327.0 309 54.4
RcHm_v2.0_Chr1g0334851 Rosa chinensis HOM05D004996 ORTHO05D005844 1.6e-87 327.0 313 54.0
MD15G1283600 Malus domestica HOM05D004996 ORTHO05D005844 2.7e-87 326.2 321 54.2
Duzib187G0496 Durio zibethinus HOM05D004996 ORTHO05D005844 7.9e-87 324.7 280 57.5
Thecc.01G055400 Theobroma cacao HOM05D004996 ORTHO05D005844 1.3e-86 323.9 321 52.6
FAN10G3007 Fragaria x ananassa HOM05D004996 ORTHO05D005844 3.0e-86 322.8 309 54.0
CsaV3_2G016730 Cucumis sativus L. HOM05D004996 ORTHO05D005844 6.7e-86 321.6 315 53.7
FAN06G0805 Fragaria x ananassa HOM05D004996 ORTHO05D005844 3.3e-85 319.3 309 54.0
Haze_16997 Corylus avellana HOM05D004996 ORTHO05D005844 3.7e-84 315.8 265 57.7
MELO3C020912.2 Cucumis melo HOM05D004996 ORTHO05D005844 4.8e-84 315.5 315 52.1
CiPaw.02G008500 Carya illinoinensis HOM05D004996 ORTHO05D005844 8.2e-84 314.7 308 51.0
Nitab4.5_0000033g0420 Nicotiana tabacum HOM05D004996 ORTHO05D005844 8.2e-84 314.7 301 54.2
Gohir.A11G192100 Gossypium hirsutum HOM05D004996 ORTHO05D005844 1.4e-83 313.9 300 53.7
ClCG02G012610 Citrullus lanatus HOM05D004996 ORTHO05D005844 1.8e-83 313.5 315 51.4
Gohir.D11G198600 Gossypium hirsutum HOM05D004996 ORTHO05D005844 3.1e-83 312.8 281 56.2
Gorai.007G212700 Gossypium raimondii HOM05D004996 ORTHO05D005844 3.1e-83 312.8 281 56.6
Sed0024126 Sechium edule HOM05D004996 ORTHO05D005844 3.1e-83 312.8 308 50.6
Ciclev10026041m.g Citrus clementina HOM05D004996 ORTHO05D005844 4.0e-83 312.4 304 54.9
Haze_16999 Corylus avellana HOM05D004996 ORTHO05D005844 4.0e-83 312.4 265 57.4
Solyc03g044470.4 Solanum lycopersicum HOM05D004996 ORTHO05D005844 5.3e-83 312.0 314 52.2
Sopen03g008630 Solanum pennellii HOM05D004996 ORTHO05D005844 5.3e-83 312.0 314 52.2
Nitab4.5_0001064g0040 Nicotiana tabacum HOM05D004996 ORTHO05D005844 1.2e-82 310.8 308 52.9
Glyma.02G301700 Glycine max HOM05D004996 ORTHO05D005844 3.4e-82 309.3 305 52.5
Sabra07G0038500 Salix brachista HOM05D004996 ORTHO05D005844 3.4e-82 309.3 319 51.4
VMungo0647G1648 Vigna mungo HOM05D004996 ORTHO05D005844 3.4e-82 309.3 304 52.0
GSVIVG01022135001 Vitis vinifera HOM05D004996 ORTHO05D005844 5.8e-82 308.5 322 50.9
HanXRQChr14g0442821 Helianthus annuus HOM05D004996 ORTHO05D005844 1.0e-81 307.8 285 54.7
Hma1.2p1_0200F.1_g085840 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 1.3e-81 307.4 312 54.2
Hma1.2p1_2839F.1_g329295 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 1.3e-81 307.4 312 54.2
PGSC0003DMG400018987 Solanum tuberosum HOM05D004996 ORTHO05D005844 1.7e-81 307.0 266 56.4
Glyma.14G012500 Glycine max HOM05D004996 ORTHO05D005844 4.9e-81 305.4 309 51.1
Phvul.008G280200 Phaseolus vulgaris HOM05D004996 ORTHO05D005844 6.5e-81 305.1 308 51.6
QL06p041440 Quercus lobata HOM05D004996 ORTHO05D005844 8.4e-81 304.7 269 56.5
Cc03_g11370 Coffea canephora HOM05D004996 ORTHO05D005844 1.1e-80 304.3 302 51.0
Lj7A69G43 Lonicera japonica HOM05D004996 ORTHO05D005844 1.1e-80 304.3 274 54.7
Cpa.g.sc55.151 Carica papaya HOM05D004996 ORTHO05D005844 1.9e-80 303.5 311 51.1
Potri.007G043600 Populus trichocarpa HOM05D004996 ORTHO05D005844 1.9e-80 303.5 324 49.1
FAN01G0777 Fragaria x ananassa HOM05D004996 ORTHO05D005844 1.2e-79 300.8 324 50.3
TWI73G1146 Tripterygium wilfordii HOM05D004996 ORTHO05D005844 1.2e-79 300.8 315 49.8
Nn7g36483 Nelumbo nucifera HOM05D004996 ORTHO05D005844 2.7e-79 299.7 323 50.8
Lalb_Chr17g0348991 Lupinus albus HOM05D004996 ORTHO05D005844 1.0e-78 297.7 267 54.7
Eucgr.I00930 Eucalyptus grandis HOM05D004996 ORTHO05D005844 1.3e-78 297.4 292 48.3
Rhsim08G0100700 Rhododendron simsii HOM05D004996 ORTHO05D005844 1.3e-78 297.4 336 48.5
DCAR_021441 Daucus carota HOM05D004996 ORTHO05D005844 1.8e-78 297.0 265 54.0
Manes.13G124600 Manihot esculenta HOM05D004996 ORTHO05D005844 1.8e-78 297.0 318 50.9
CANSAT01G2652 Cannabis sativa HOM05D004996 ORTHO05D005844 3.0e-78 296.2 265 55.5
Oeu004826.1 Olea europaea HOM05D004996 ORTHO05D005844 6.7e-78 295.0 314 46.8
Lsat_1_v5_gn_2_84140 Lactuca sativa HOM05D004996 ORTHO05D005844 8.7e-78 294.7 301 52.8
CAN.G11.7 Capsicum annuum HOM05D004996 ORTHO05D005844 1.5e-77 293.9 316 49.4
Psat2g006800 Pisum sativum HOM05D004996 ORTHO05D005844 7.4e-77 291.6 302 48.3
Phvul.008G280300 Phaseolus vulgaris HOM05D004996 ORTHO05D005844 1.6e-76 290.4 267 52.8
Actinidia16491 Actinidia chinensis HOM05D004996 ORTHO05D005844 8.2e-76 288.1 266 53.8
arahy.Tifrunner.gnm1.ann1.X0LXK2 Arachis hypogaea HOM05D004996 ORTHO05D005844 8.2e-76 288.1 283 50.5
LjContig00272g0002438 Lotus japonicus HOM05D004996 ORTHO05D005844 1.4e-75 287.3 267 51.7
Peaxi162Scf00685g00059 Petunia axillaris HOM05D004996 ORTHO05D005844 1.8e-75 287.0 296 52.0
LjContig00272g0020566 Lotus japonicus HOM05D004996 ORTHO05D005844 2.4e-75 286.6 267 51.7
EL10Ac6g15748 Beta vulgaris HOM05D004996 ORTHO05D005844 9.0e-75 284.6 312 46.5
PGR004G2460 Punica granatum HOM05D004996 ORTHO05D005844 9.0e-75 284.6 274 50.4
SalBow6G7153 Salvia bowleyana HOM05D004996 ORTHO05D005844 9.0e-75 284.6 301 48.8
LjContig00081g0020523 Lotus japonicus HOM05D004996 ORTHO05D005844 1.2e-74 284.3 282 50.4
Medtr5g096150 Medicago truncatula HOM05D004996 ORTHO05D005844 1.5e-74 283.9 318 46.5
Ca_05570_v3 Cicer arietinum L. HOM05D004996 ORTHO05D005844 2.0e-74 283.5 280 48.2
MSTRG.23749 Avicennia marina HOM05D004996 ORTHO05D005844 2.6e-74 283.1 295 46.8
Ah.02g120540 Amaranthus hybridus HOM05D004996 ORTHO05D005844 5.9e-74 282.0 285 50.2
C01p02010 Brassica napus HOM05D004996 ORTHO05D005844 7.7e-74 281.6 306 48.4
Cfa004018 Carpinus fangiana HOM05D004996 ORTHO05D005844 1.3e-73 280.8 301 49.5
Haze_15405 Corylus avellana HOM05D004996 ORTHO05D005844 3.8e-73 279.3 308 48.7
QL06p041448 Quercus lobata HOM05D004996 ORTHO05D005844 3.8e-73 279.3 269 51.3
CARHR245500 Cardamine hirsuta HOM05D004996 ORTHO05D005844 5.0e-73 278.9 309 46.3
ECA238G3150 Erigeron canadensis HOM05D004996 ORTHO05D005844 6.5e-73 278.5 266 52.6
A01p01870 Brassica napus HOM05D004996 ORTHO05D005844 8.5e-73 278.1 313 48.9
Thhalv10025731m.g Eutrema salsugineum HOM05D004996 ORTHO05D005844 8.5e-73 278.1 310 46.8
THA.LOC104807582 Tarenaya hassleriana HOM05D004996 ORTHO05D005844 1.1e-72 277.7 319 45.8
CANSAT11G2671 Cannabis sativa HOM05D004996 ORTHO05D005844 1.4e-72 277.3 266 52.3
CANSAT11G1602 Cannabis sativa HOM05D004996 ORTHO05D005844 1.9e-72 276.9 266 52.3
Sp7g34760 Schrenkiella parvula HOM05D004996 ORTHO05D005844 1.9e-72 276.9 309 46.3
vmacro17952 Vaccinium macrocarpon HOM05D004996 ORTHO05D005844 2.5e-72 276.6 324 49.1
Aa31LG6G13970 Aethionema arabicum HOM05D004996 ORTHO05D005844 4.2e-72 275.8 275 49.8
BraA01t00176Z Brassica rapa HOM05D004996 ORTHO05D005844 7.2e-72 275.0 312 48.4
Thhalv10027846m.g Eutrema salsugineum HOM05D004996 ORTHO05D005844 9.4e-72 274.6 274 49.6
AL7G13770 Arabidopsis lyrata HOM05D004996 ORTHO05D005844 1.2e-71 274.2 313 45.4
AT4G37000 Arabidopsis thaliana HOM05D004996 ORTHO05D005844 2.1e-71 273.5 272 49.3
AUR62003879 Chenopodium quinoa HOM05D004996 ORTHO05D005844 2.7e-71 273.1 307 46.3
CDE02G2298 Ceratophyllum demersum HOM05D004996 ORTHO05D005844 3.6e-71 272.7 267 51.7
Migut.H00434 Erythranthe guttata HOM05D004996 ORTHO05D005844 3.6e-71 272.7 277 50.2
Sc07g0000030 Simmondsia chinensis HOM05D004996 ORTHO05D005844 6.1e-71 271.9 264 50.8
TPR.G36603 Trifolium pratense HOM05D004996 ORTHO05D005844 6.1e-71 271.9 317 44.8
Thhalv10027845m.g Eutrema salsugineum HOM05D004996 ORTHO05D005844 1.8e-70 270.4 274 49.3
CiPaw.01G018500 Carya illinoinensis HOM05D004996 ORTHO05D005844 8.8e-70 268.1 314 45.5
Potri.007G043700 Populus trichocarpa HOM05D004996 ORTHO05D005844 3.3e-69 266.2 315 47.9
Carub.0007s0320 Capsella rubella HOM05D004996 ORTHO05D005844 4.3e-69 265.8 310 44.2
BolC1t00195H Brassica oleracea HOM05D004996 ORTHO05D005844 4.8e-68 262.3 340 43.2
CDE02G3886 Ceratophyllum demersum HOM05D004996 ORTHO05D005844 4.8e-68 262.3 293 44.0
ClCG02G012600 Citrullus lanatus HOM05D004996 ORTHO05D005844 1.4e-67 260.8 265 46.0
Ciclev10026248m.g Citrus clementina HOM05D004996 ORTHO05D005844 1.8e-67 260.4 277 49.8
unitig_736.g22663 Utricularia gibba HOM05D004996 ORTHO05D005844 2.6e-66 256.5 265 46.8
MELO3C020913.2 Cucumis melo HOM05D004996 ORTHO05D005844 7.7e-66 255.0 306 41.5
CsaV3_2G016720 Cucumis sativus L. HOM05D004996 ORTHO05D005844 1.3e-65 254.2 266 45.5
Atru.chr3.335 Acer truncatum HOM05D004996 ORTHO05D005844 2.2e-65 253.4 283 47.3
Hund13551 Selenicereus undatus HOM05D004996 ORTHO05D005844 2.2e-65 253.4 278 46.0
Dinv29984 Davidia involucrata HOM05D004996 ORTHO05D005844 2.9e-65 253.1 235 55.7
BcaNung02518 Brassica carinata HOM05D004996 ORTHO05D005844 6.5e-65 251.9 308 44.5
TWI53G0428 Tripterygium wilfordii HOM05D004996 ORTHO05D005844 8.5e-65 251.5 284 47.2
Sed0020584 Sechium edule HOM05D004996 ORTHO05D005844 7.2e-64 248.4 298 43.6
Sabra07G0038400 Salix brachista HOM05D004996 ORTHO05D005844 9.7e-61 238.0 302 46.0
SGA_v2.0_scaffold15G07296 Striga asiatica HOM05D004996 ORTHO05D005844 2.2e-60 236.9 270 46.3
HPP92_028287 Vanilla planifolia HOM05D004996 ORTHO05D005844 2.4e-59 233.4 271 43.9
Potri.007G043500 Populus trichocarpa HOM05D004996 ORTHO05D005844 5.9e-58 228.8 238 49.2
Hma1.2p1_0200F.1_g085860 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 1.0e-57 228.0 202 58.4
Hma1.2p1_2839F.1_g329298 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 1.0e-57 228.0 202 58.4
Os10g0389200 Oryza sativa ssp. japonica HOM05D004996 ORTHO05D005844 1.4e-56 224.2 262 42.4
TWI09G1278 Tripterygium wilfordii HOM05D004996 ORTHO05D005844 1.9e-56 223.8 249 45.4
Zm00001eb027950 Zea mays HOM05D004996 ORTHO05D005844 3.2e-56 223.0 241 45.6
TPR.G36604 Trifolium pratense HOM05D004996 ORTHO05D005844 4.2e-56 222.6 203 50.2
CSS0031276 Camellia sinensis var. sinensis HOM05D004996 ORTHO05D005844 2.7e-55 219.9 199 56.3
ATR0009G017 Amborella trichopoda HOM05D004996 ORTHO05D005844 3.6e-55 219.5 298 42.3
Ah.06g186350 Amaranthus hybridus HOM05D004996 ORTHO05D005844 4.4e-53 212.6 262 44.3
Hund13537 Selenicereus undatus HOM05D004996 ORTHO05D005844 7.4e-53 211.8 306 38.9
SMO348G0076 Selaginella moellendorffii HOM05D004996 ORTHO05D005844 8.0e-47 191.8 263 37.6
Pp3c15_3570 Physcomitrium patens HOM05D004996 ORTHO05D005844 1.8e-46 190.7 262 37.8
AUR62001931 Chenopodium quinoa HOM05D004996 ORTHO05D005844 1.7e-44 184.1 172 50.6
HanXRQChr14g0442841 Helianthus annuus HOM05D004996 ORTHO05D005844 2.2e-44 183.7 178 50.6
Atru.chr3.332 Acer truncatum HOM05D004996 ORTHO05D005844 3.7e-44 183.0 214 46.3
AagrBONN_evm.TU.Sc2ySwM_368.2728 Anthoceros agrestis HOM05D004996 ORTHO05D005844 2.4e-43 180.3 268 38.1
Mapoly0002s0316 Marchantia polymorpha HOM05D004996 ORTHO05D005844 2.7e-42 176.8 260 40.4
Hund13538 Selenicereus undatus HOM05D004996 ORTHO05D005844 1.1e-40 171.4 268 38.4
Mapoly0007s0155 Marchantia polymorpha HOM05D004996 ORTHO05D005844 2.3e-38 163.7 265 36.2
AagrBONN_evm.TU.Sc2ySwM_340.386 Anthoceros agrestis HOM05D004996 ORTHO05D005844 2.6e-37 160.2 265 33.6
Os10g0389300 Oryza sativa ssp. japonica HOM05D004996 ORTHO05D005844 1.5e-32 144.4 206 39.3
Dinv39853 Davidia involucrata HOM05D004996 ORTHO05D005844 1.3e-25 121.3 98 58.2
Os10g0389100 Oryza sativa ssp. japonica HOM05D004996 ORTHO05D005844 6.8e-22 109.0 203 31.5
HPP92_019276 Vanilla planifolia HOM05D004996 ORTHO05D005844 3.2e-19 100.1 123 41.5
Atru.chr3.333 Acer truncatum HOM05D004996 ORTHO05D005844 4.7e-15 86.3 88 47.7
Hma1.2p1_0200F.1_g085850 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 6.2e-15 85.9 111 46.8
Hma1.2p1_2839F.1_g329297 Hydrangea macrophylla HOM05D004996 ORTHO05D005844 6.2e-15 85.9 111 46.8
TPR.G22736 Trifolium pratense HOM05D004996 ORTHO05D005844 3.1e-14 83.6 99 41.4
Mapoly0002s0315 Marchantia polymorpha HOM05D004996 ORTHO05D005844 1.1e-11 75.1 130 36.2
CBR_g39811 Chara braunii HOM05D004996 ORTHO05D005844 2.4e-11 73.9 230 24.3
CBR_g39812 Chara braunii HOM05D004996 ORTHO05D005844 9.2e-11 72.0 274 25.2
CBR_g39828 Chara braunii HOM05D001539 ORTHO05D008140 9.2e-11 72.0 286 23.8
TPR.G22585 Trifolium pratense HOM05D004996 ORTHO05D005844 9.2e-11 72.0 78 46.2


User provided reference genes

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