Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G4998 Papaver somniferum HOM05D005661 ORTHO05D007997 1.3e-166 589.7 306 100.0
Nn5g27134 Nelumbo nucifera HOM05D005661 ORTHO05D007997 3.4e-111 405.6 305 71.8
CSS0021874 Camellia sinensis var. sinensis HOM05D005661 ORTHO05D007997 1.0e-107 394.0 302 70.2
Oeu000159.1 Olea europaea HOM05D005661 ORTHO05D007997 3.9e-107 392.1 298 70.8
Dinv38445 Davidia involucrata HOM05D005661 ORTHO05D007997 7.3e-106 387.9 249 78.7
Potri.004G230200 Populus trichocarpa HOM05D005661 ORTHO05D007997 7.3e-106 387.9 292 70.9
QL02p103676 Quercus lobata HOM05D005661 ORTHO05D007997 7.3e-106 387.9 237 82.3
TAR628G0241 Trochodendron aralioides HOM05D005661 ORTHO05D007997 7.3e-106 387.9 283 73.1
FAN04G2212 Fragaria x ananassa HOM05D005661 ORTHO05D007997 9.5e-106 387.5 259 77.2
Actinidia11729 Actinidia chinensis HOM05D005661 ORTHO05D007997 1.2e-105 387.1 303 69.6
Migut.B00706 Erythranthe guttata HOM05D005661 ORTHO05D007997 1.2e-105 387.1 297 70.7
Manes.14G146200 Manihot esculenta HOM05D005661 ORTHO05D007997 4.7e-105 385.2 298 69.8
GSVIVG01023131001 Vitis vinifera HOM05D005661 ORTHO05D007997 4.7e-105 385.2 299 70.2
Eucgr.I02806 Eucalyptus grandis HOM05D005661 ORTHO05D007997 6.2e-105 384.8 264 75.8
MELO3C016431.2 Cucumis melo HOM05D005661 ORTHO05D007997 1.1e-104 384.0 228 83.8
MBI06_g17067_MAGBIO Magnolia biondii HOM05D005661 ORTHO05D007997 1.4e-104 383.6 302 69.9
Rhsim11G0115300 Rhododendron simsii HOM05D005661 ORTHO05D007997 1.4e-104 383.6 240 81.2
CsaV3_3G006740 Cucumis sativus L. HOM05D005661 ORTHO05D007997 1.8e-104 383.3 289 70.9
Aqoxy1G02010 Aquilegia oxysepala HOM05D005661 ORTHO05D007997 2.3e-104 382.9 273 74.7
MD15G1444200 Malus domestica HOM05D005661 ORTHO05D007997 4.0e-104 382.1 264 74.6
PGR142G1782 Punica granatum HOM05D005661 ORTHO05D007997 4.0e-104 382.1 259 76.1
Ciclev10002035m.g Citrus clementina HOM05D005661 ORTHO05D007997 5.2e-104 381.7 242 77.3
Gohir.D06G117100 Gossypium hirsutum HOM05D005661 ORTHO05D007997 1.2e-103 380.6 287 70.0
CANSAT01G0358 Cannabis sativa HOM05D005661 ORTHO05D007997 1.5e-103 380.2 295 70.2
FAN08G1685 Fragaria x ananassa HOM05D005661 ORTHO05D007997 1.5e-103 380.2 317 65.9
FvH4_5g27480 Fragaria vesca HOM05D005661 ORTHO05D007997 4.4e-103 378.6 282 72.7
Gorai.010G134700 Gossypium raimondii HOM05D005661 ORTHO05D007997 4.4e-103 378.6 289 70.2
Thecc.06G064100 Theobroma cacao HOM05D005661 ORTHO05D007997 4.4e-103 378.6 257 75.9
Lsat_1_v5_gn_9_124861 Lactuca sativa HOM05D005661 ORTHO05D007997 5.8e-103 378.3 302 70.2
Prupe.1G586600 Prunus persica HOM05D005661 ORTHO05D007997 5.8e-103 378.3 246 78.9
TPR.G5996 Trifolium pratense HOM05D005661 ORTHO05D007997 5.8e-103 378.3 244 80.7
RcHm_v2.0_Chr7g0218881 Rosa chinensis HOM05D005661 ORTHO05D007997 7.5e-103 377.9 228 82.9
TWI23G0175 Tripterygium wilfordii HOM05D005661 ORTHO05D007997 7.5e-103 377.9 292 69.5
Solyc01g102820.4 Solanum lycopersicum HOM05D005661 ORTHO05D007997 1.3e-102 377.1 304 67.1
Sopen01g045220 Solanum pennellii HOM05D005661 ORTHO05D007997 1.3e-102 377.1 304 67.1
ECA246G0516 Erigeron canadensis HOM05D005661 ORTHO05D007997 2.2e-102 376.3 271 73.8
Nitab4.5_0001085g0130 Nicotiana tabacum HOM05D005661 ORTHO05D007997 2.2e-102 376.3 249 77.1
Nitab4.5_0006159g0030 Nicotiana tabacum HOM05D005661 ORTHO05D007997 2.9e-102 375.9 248 77.4
MSTRG.16459 Avicennia marina HOM05D005661 ORTHO05D007997 3.7e-102 375.6 305 67.9
HanXRQChr05g0153021 Helianthus annuus HOM05D005661 ORTHO05D007997 4.9e-102 375.2 272 73.5
CAN.G1379.8 Capsicum annuum HOM05D005661 ORTHO05D007997 6.4e-102 374.8 302 67.2
Cfa004424 Carpinus fangiana HOM05D005661 ORTHO05D007997 1.4e-101 373.6 251 77.3
FAN13G1518 Fragaria x ananassa HOM05D005661 ORTHO05D007997 1.9e-101 373.2 230 82.2
PGSC0003DMG401018218 Solanum tuberosum HOM05D005661 ORTHO05D007997 2.4e-101 372.9 304 66.8
DCAR_031998 Daucus carota HOM05D005661 ORTHO05D007997 3.2e-101 372.5 245 76.7
Peaxi162Scf00194g01045 Petunia axillaris HOM05D005661 ORTHO05D007997 5.4e-101 371.7 234 79.5
Gohir.A06G112500 Gossypium hirsutum HOM05D005661 ORTHO05D007997 9.2e-101 370.9 287 69.0
MD08G1249400 Malus domestica HOM05D005661 ORTHO05D007997 9.2e-101 370.9 228 82.0
Glyma.17G002400 Glycine max HOM05D005661 ORTHO05D007997 1.6e-100 370.2 227 80.2
Sc09g0007750 Simmondsia chinensis HOM05D005661 ORTHO05D007997 2.7e-100 369.4 246 75.2
Manes.14G166900 Manihot esculenta HOM05D005661 ORTHO05D007997 3.5e-100 369.0 293 67.2
Psat0s2555g0200 Pisum sativum HOM05D005661 ORTHO05D007997 4.6e-100 368.6 276 71.0
THA.LOC104801778 Tarenaya hassleriana HOM05D005661 ORTHO05D007997 6.0e-100 368.2 298 67.4
unitig_21.g20570 Utricularia gibba HOM05D005661 ORTHO05D007997 6.0e-100 368.2 243 78.2
DCAR_001732 Daucus carota HOM05D005661 ORTHO05D007997 1.0e-99 367.5 306 67.3
ATR1089G013 Amborella trichopoda HOM05D005661 ORTHO05D007997 2.3e-99 366.3 285 69.1
HanXRQChr09g0249911 Helianthus annuus HOM05D005661 ORTHO05D007997 2.3e-99 366.3 220 83.6
MSTRG.20341 Avicennia marina HOM05D005661 ORTHO05D007997 5.1e-99 365.2 279 71.3
Cc02_g23630 Coffea canephora HOM05D005661 ORTHO05D007997 5.1e-99 365.2 301 65.8
Carub.0005s0153 Capsella rubella HOM05D005661 ORTHO05D007997 2.5e-98 362.8 289 67.8
AUR62042241 Chenopodium quinoa HOM05D005661 ORTHO05D007997 2.5e-98 362.8 293 67.6
VMungo1215G1111 Vigna mungo HOM05D005661 ORTHO05D007997 2.5e-98 362.8 241 76.3
CARHR145060 Cardamine hirsuta HOM05D005661 ORTHO05D007997 4.3e-98 362.1 289 68.5
BcaB07g30331 Brassica carinata HOM05D005661 ORTHO05D007997 1.1e-96 357.5 296 66.2
AL5G11770 Arabidopsis lyrata HOM05D005661 ORTHO05D007997 1.8e-96 356.7 289 66.8
AT2G02500 Arabidopsis thaliana HOM05D005661 ORTHO05D007997 1.8e-96 356.7 241 75.5
Thhalv10004647m.g Eutrema salsugineum HOM05D005661 ORTHO05D007997 2.4e-96 356.3 301 67.4
Lj4g0018255 Lotus japonicus HOM05D005661 ORTHO05D007997 2.4e-96 356.3 246 75.2
A02p32920 Brassica napus HOM05D005661 ORTHO05D007997 6.8e-96 354.8 256 71.9
Dinv29650 Davidia involucrata HOM05D005661 ORTHO05D007997 2.0e-95 353.2 208 84.1
C02p50650 Brassica napus HOM05D005661 ORTHO05D007997 4.4e-95 352.1 270 68.1
BraA02t08315Z Brassica rapa HOM05D005661 ORTHO05D007997 4.4e-95 352.1 300 64.3
BolC2t11148H Brassica oleracea HOM05D005661 ORTHO05D007997 5.8e-95 351.7 297 65.0
Sp2g13750 Schrenkiella parvula HOM05D005661 ORTHO05D007997 5.8e-95 351.7 297 64.6
BcaC03g17145 Brassica carinata HOM05D005661 ORTHO05D007997 9.9e-95 350.9 300 65.0
Sabra01G0175500 Salix brachista HOM05D005661 ORTHO05D007997 2.9e-94 349.4 309 63.1
COL.COLO4_31208 Corchorus olitorius HOM05D005661 ORTHO05D007997 6.4e-94 348.2 208 82.2
Lalb_Chr07g0176831 Lupinus albus HOM05D005661 ORTHO05D007997 6.4e-94 348.2 215 80.9
Phvul.003G090900 Phaseolus vulgaris HOM05D005661 ORTHO05D007997 6.4e-94 348.2 228 76.8
HPP92_003715 Vanilla planifolia HOM05D005661 ORTHO05D007997 8.4e-94 347.8 263 68.4
Aa31LG2G7610 Aethionema arabicum HOM05D005661 ORTHO05D007997 1.1e-93 347.4 294 64.3
HPP92_003721 Vanilla planifolia HOM05D005661 ORTHO05D007997 1.9e-93 346.7 258 69.4
EL10Ac6g13962 Beta vulgaris HOM05D005661 ORTHO05D007997 2.4e-93 346.3 225 76.9
AUR62032486 Chenopodium quinoa HOM05D005661 ORTHO05D007997 5.4e-93 345.1 295 66.1
SEGI_39309 Sequoiadendron giganteum HOM05D005661 ORTHO05D007997 7.1e-93 344.7 244 73.0
Medtr4g134540 Medicago truncatula HOM05D005661 ORTHO05D007997 9.2e-93 344.4 216 80.6
Zm00001eb365960 Zea mays HOM05D005661 ORTHO05D007997 1.7e-91 340.1 245 72.2
Zm00001eb145390 Zea mays HOM05D005661 ORTHO05D007997 6.6e-91 338.2 230 74.3
Haze_09964 Corylus avellana HOM05D005661 ORTHO05D007997 3.1e-88 329.3 264 68.2
Pp3c15_1010 Physcomitrium patens HOM05D005661 ORTHO05D007997 3.1e-88 329.3 222 74.8
arahy.Tifrunner.gnm1.ann1.PPAS6H Arachis hypogaea HOM05D005661 ORTHO05D007997 6.9e-88 328.2 258 67.1
Mapoly0006s0146 Marchantia polymorpha HOM05D005661 ORTHO05D007997 1.5e-87 327.0 232 72.4
Pp3c9_590 Physcomitrium patens HOM05D005661 ORTHO05D007997 4.4e-87 325.5 222 73.4
ClCG10G007530 Citrullus lanatus HOM05D005661 ORTHO05D007997 7.6e-87 324.7 391 51.9
arahy.Tifrunner.gnm1.ann1.FQN863 Arachis hypogaea HOM05D005661 ORTHO05D007997 6.4e-86 321.6 258 67.4
Ah.02g128470 Amaranthus hybridus HOM05D005661 ORTHO05D007997 1.9e-85 320.1 303 60.4
Cpa.g.sc173.2 Carica papaya HOM05D005661 ORTHO05D007997 6.0e-84 315.1 206 77.2
SMO367G1090 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 5.1e-83 312.0 226 70.4
Ca_13523_v3 Cicer arietinum L. HOM05D005661 ORTHO05D007997 1.1e-82 310.8 193 81.9
CDE02G0980 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 4.8e-81 305.4 275 62.5
SGA_v2.0_scaffold131G34439 Striga asiatica HOM05D005661 ORTHO05D007997 4.8e-81 305.4 299 61.2
vmacro01624 Vaccinium macrocarpon HOM05D005661 ORTHO05D007997 1.8e-80 303.5 295 61.0
Sed0000786 Sechium edule HOM05D005661 ORTHO05D007997 3.1e-80 302.8 180 84.4
CiPaw.06G177000 Carya illinoinensis HOM05D005661 ORTHO05D007997 1.6e-76 290.4 204 73.0
CDE04G2298 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 4.3e-74 282.3 275 58.9
Os01g0887100 Oryza sativa ssp. japonica HOM05D005661 ORTHO05D007997 1.9e-69 266.9 174 76.4
Lj5A292T55 Lonicera japonica HOM05D005661 ORTHO05D007997 2.5e-69 266.5 208 69.2
MCO15G500 Micromonas commoda HOM05D005661 ORTHO05D007997 2.1e-68 263.5 267 55.1
Cre16.g679669 Chlamydomonas reinhardtii HOM05D005661 ORTHO05D007997 7.9e-68 261.5 254 54.3
Actinidia00142 Actinidia chinensis HOM05D005661 ORTHO05D007997 1.5e-63 247.3 202 65.3
Atru.chr6.139 Acer truncatum HOM05D005661 ORTHO05D007997 4.2e-61 239.2 208 63.5
CBR_g214 Chara braunii HOM05D005661 ORTHO05D007997 2.2e-54 216.9 175 60.6
Lj5A292T53 Lonicera japonica HOM05D005661 ORTHO05D007997 5.1e-51 205.7 176 64.2
Hund15335 Selenicereus undatus HOM05D005661 ORTHO05D007997 1.1e-42 177.9 162 59.3
AUR62030219 Chenopodium quinoa HOM05D005661 ORTHO05D007997 2.0e-39 167.2 168 56.5
AagrBONN_evm.TU.Sc2ySwM_362.430 Anthoceros agrestis HOM05D005661 ORTHO05D007997 3.5e-39 166.4 151 59.6
arahy.Tifrunner.gnm1.ann1.H0NKK3 Arachis hypogaea HOM05D005661 ORTHO05D007997 3.8e-38 162.9 145 62.1
HanXRQChr03g0069601 Helianthus annuus HOM05D005661 ORTHO05D007997 5.0e-38 162.5 104 76.0
FvH4_5g27493 Fragaria vesca HOM05D005661 ORTHO05D007997 5.2e-27 125.9 265 38.9
Ca_21047_v3 Cicer arietinum L. HOM05D005661 ORTHO05D147477 1.2e-26 124.8 299 36.8
VMungo1364G0001 Vigna mungo HOM05D005661 ORTHO05D005421 4.8e-25 119.4 147 46.9
FAN08G3692 Fragaria x ananassa HOM05D005661 ORTHO05D208506 4.5e-23 112.8 180 43.9
AagrBONN_evm.TU.Sc2ySwM_362.419 Anthoceros agrestis HOM05D005661 ORTHO05D007997 3.8e-22 109.8 65 80.0
FAN08G1519 Fragaria x ananassa HOM05D005661 ORTHO05D210776 9.4e-21 105.1 115 57.4
SMO367G1054 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 1.0e-19 101.7 144 45.8
HanXRQChr14g0444001 Helianthus annuus HOM05D005661 ORTHO05D007997 2.2e-17 94.0 62 69.4
Haze_27119 Corylus avellana HOM05D005196 ORTHO05D006107 3.1e-16 90.1 246 29.3
Ca_29126_v3 Cicer arietinum L. HOM05D005661 ORTHO05D148461 2.7e-15 87.0 218 29.8
CAN.G242.16 Capsicum annuum HOM05D005661 ORTHO05D007997 5.9e-15 85.9 56 71.4
Lj5A292T54 Lonicera japonica HOM05D005661 ORTHO05D007997 3.8e-14 83.2 48 81.2
FvH4_5g27491 Fragaria vesca HOM05D005661 ORTHO05D046262 1.2e-12 78.2 87 57.5
FAN08G0833 Fragaria x ananassa HOM05D005661 ORTHO05D203111 1.8e-08 64.3 61 63.9
Medtr4g129075 Medicago truncatula HOM05D005661 ORTHO05D266434 8.6e-06 55.5 32 78.1


User provided reference genes

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