Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G4997 Papaver somniferum HOM05D006197 ORTHO05D007718 5.8e-49 197.2 98 100.0
PSO832G1675 Papaver somniferum HOM05D006197 ORTHO05D007718 1.7e-48 195.7 98 99.0
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 9.4e-31 136.7 101 70.3
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 1.8e-29 132.5 97 73.2
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 3.9e-29 131.3 97 70.1
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 4.4e-28 127.9 100 62.0
MD16G1269400 Malus domestica HOM05D006197 ORTHO05D007718 4.4e-28 127.9 101 67.3
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 7.4e-28 127.1 98 65.3
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 1.3e-27 126.3 100 64.0
Manes.15G173000 Manihot esculenta HOM05D006197 ORTHO05D007718 4.8e-27 124.4 99 64.6
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 6.3e-27 124.0 102 63.7
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 8.2e-27 123.6 100 63.0
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 1.8e-26 122.5 98 63.3
FAN04G1051 Fragaria x ananassa HOM05D006197 ORTHO05D007718 3.1e-26 121.7 99 65.7
Ciclev10033154m.g Citrus clementina HOM05D006197 ORTHO05D007718 9.1e-26 120.2 103 61.2
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 1.5e-25 119.4 101 62.4
SalBow1G7863 Salvia bowleyana HOM05D006197 ORTHO05D007718 1.5e-25 119.4 101 63.4
FAN18G0540 Fragaria x ananassa HOM05D006197 ORTHO05D007718 2.0e-25 119.0 99 65.7
Gohir.A04G000300 Gossypium hirsutum HOM05D006197 ORTHO05D007718 2.6e-25 118.6 98 62.2
PGR042G3581 Punica granatum HOM05D006197 ORTHO05D007718 2.6e-25 118.6 98 60.2
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 3.5e-25 118.2 107 60.7
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 3.5e-25 118.2 107 60.7
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 3.5e-25 118.2 107 60.7
ECA240G0414 Erigeron canadensis HOM05D006197 ORTHO05D007718 3.5e-25 118.2 106 60.4
FAN08G0099 Fragaria x ananassa HOM05D006197 ORTHO05D007718 3.5e-25 118.2 99 65.7
Gohir.D08G180000 Gossypium hirsutum HOM05D006197 ORTHO05D007718 3.5e-25 118.2 98 62.2
Gorai.004G188500 Gossypium raimondii HOM05D006197 ORTHO05D007718 3.5e-25 118.2 98 62.2
HanXRQChr08g0234831 Helianthus annuus HOM05D006197 ORTHO05D007718 3.5e-25 118.2 107 61.7
Duzib068G0126 Durio zibethinus HOM05D006197 ORTHO05D007718 4.5e-25 117.9 98 61.2
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 4.5e-25 117.9 107 64.5
TWI81G0993 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 4.5e-25 117.9 100 60.0
Dinv25183 Davidia involucrata HOM05D002285 ORTHO05D009255 5.9e-25 117.5 102 60.8
FAN13G1034 Fragaria x ananassa HOM05D006197 ORTHO05D007718 5.9e-25 117.5 96 64.6
Oeu006551.1 Olea europaea HOM05D006197 ORTHO05D007718 7.7e-25 117.1 107 60.7
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 1.0e-24 116.7 104 61.5
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 1.0e-24 116.7 104 61.5
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 1.0e-24 116.7 103 61.2
Eucgr.E00313 Eucalyptus grandis HOM05D006197 ORTHO05D007718 1.0e-24 116.7 98 59.2
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 1.0e-24 116.7 107 61.7
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 1.3e-24 116.3 104 61.5
Gohir.A08G159600 Gossypium hirsutum HOM05D006197 ORTHO05D007718 1.3e-24 116.3 98 61.2
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 1.7e-24 115.9 98 59.2
RcHm_v2.0_Chr7g0208331 Rosa chinensis HOM05D006197 ORTHO05D007718 1.7e-24 115.9 98 61.2
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 2.9e-24 115.2 101 63.4
Atru.chr6.1773 Acer truncatum HOM05D006197 ORTHO05D007718 3.8e-24 114.8 99 60.6
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 3.8e-24 114.8 104 60.6
QL12p007107 Quercus lobata HOM05D006197 ORTHO05D007718 3.8e-24 114.8 103 56.3
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 3.8e-24 114.8 99 59.6
Sabra01G0115400 Salix brachista HOM05D006197 ORTHO05D007718 5.0e-24 114.4 100 58.0
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 5.0e-24 114.4 103 59.2
arahy.Tifrunner.gnm1.ann1.M9L3KI Arachis hypogaea HOM05D006197 ORTHO05D007718 6.5e-24 114.0 105 57.1
arahy.Tifrunner.gnm1.ann1.PC0NS4 Arachis hypogaea HOM05D006197 ORTHO05D007718 6.5e-24 114.0 105 57.1
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 6.5e-24 114.0 100 58.0
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 6.5e-24 114.0 107 60.7
Cpa.g.sc6.409 Carica papaya HOM05D006197 ORTHO05D007718 8.5e-24 113.6 98 59.2
Thhalv10006335m.g Eutrema salsugineum HOM05D006197 ORTHO05D007718 8.5e-24 113.6 98 56.1
Glyma.11G041000 Glycine max HOM05D006197 ORTHO05D007718 8.5e-24 113.6 102 59.8
Gorai.008G229000 Gossypium raimondii HOM05D006197 ORTHO05D007718 8.5e-24 113.6 98 59.2
Lj2g0021118 Lotus japonicus HOM05D006197 ORTHO05D007718 8.5e-24 113.6 107 59.8
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 8.5e-24 113.6 103 58.3
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 8.5e-24 113.6 103 58.3
AL5G41940 Arabidopsis lyrata HOM05D006197 ORTHO05D007718 1.1e-23 113.2 98 56.1
AT3G59840 Arabidopsis thaliana HOM05D006197 ORTHO05D007718 1.1e-23 113.2 98 56.1
Carub.0005s2656 Capsella rubella HOM05D006197 ORTHO05D007718 1.1e-23 113.2 98 56.1
Migut.N01790 Erythranthe guttata HOM05D006197 ORTHO05D007718 1.1e-23 113.2 105 61.9
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 1.1e-23 113.2 111 56.8
Thecc.03G234100 Theobroma cacao HOM05D006197 ORTHO05D007718 1.1e-23 113.2 102 59.8
Medtr5g013975 Medicago truncatula HOM05D006197 ORTHO05D007718 1.5e-23 112.8 106 57.5
Peaxi162Scf00084g00099 Petunia axillaris HOM05D006197 ORTHO05D007718 1.5e-23 112.8 97 59.8
Rhsim11G0011100 Rhododendron simsii HOM05D006197 ORTHO05D007718 1.5e-23 112.8 99 57.6
Sp5g03300 Schrenkiella parvula HOM05D006197 ORTHO05D007718 1.5e-23 112.8 98 56.1
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 1.9e-23 112.5 100 59.0
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 1.9e-23 112.5 100 59.0
Oeu014592.2 Olea europaea HOM05D006197 ORTHO05D007718 1.9e-23 112.5 107 59.8
CARHR170180 Cardamine hirsuta HOM05D006197 ORTHO05D007718 2.5e-23 112.1 98 57.1
BcaB02g07441 Brassica carinata HOM05D006197 ORTHO05D007718 3.2e-23 111.7 98 55.1
BcaC07g40434 Brassica carinata HOM05D006197 ORTHO05D007718 3.2e-23 111.7 98 56.1
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 4.2e-23 111.3 100 58.0
VMungo1215G1228 Vigna mungo HOM05D006197 ORTHO05D007718 5.5e-23 110.9 106 56.6
Gohir.D12G213400 Gossypium hirsutum HOM05D006197 ORTHO05D007718 7.2e-23 110.5 98 58.2
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 9.4e-23 110.2 100 58.0
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 9.4e-23 110.2 101 59.4
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 9.4e-23 110.2 101 59.4
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 9.4e-23 110.2 99 57.6
ATR1088G052 Amborella trichopoda HOM05D006197 ORTHO05D007718 1.2e-22 109.8 106 56.6
Ca_24632_v3 Cicer arietinum L. HOM05D006197 ORTHO05D007718 1.2e-22 109.8 105 57.1
COL.COLO4_17110 Corchorus olitorius HOM05D006197 ORTHO05D007718 1.2e-22 109.8 98 58.2
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 1.2e-22 109.8 101 60.4
BcaC07g40556 Brassica carinata HOM05D006197 ORTHO05D007718 1.6e-22 109.4 98 56.1
A09p52120 Brassica napus HOM05D006197 ORTHO05D007718 1.6e-22 109.4 98 56.1
AUR62007231 Chenopodium quinoa HOM05D006197 ORTHO05D007718 1.6e-22 109.4 101 62.4
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 2.1e-22 109.0 95 64.2
C06p26450 Brassica napus HOM05D006197 ORTHO05D007718 2.1e-22 109.0 101 58.4
EL10Ac5g12195 Beta vulgaris HOM05D006197 ORTHO05D007718 3.6e-22 108.2 100 63.0
Cc00_g31810 Coffea canephora HOM05D006197 ORTHO05D007718 3.6e-22 108.2 85 67.1
Glyma.01G201200 Glycine max HOM05D006197 ORTHO05D007718 3.6e-22 108.2 105 55.2
unitig_747.g21291 Utricularia gibba HOM05D006197 ORTHO05D007718 3.6e-22 108.2 108 54.6
Phvul.002G004500 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 4.7e-22 107.8 101 58.4
AUR62018769 Chenopodium quinoa HOM05D006197 ORTHO05D007718 6.1e-22 107.5 100 59.0
CANSAT64G2368 Cannabis sativa HOM05D006197 ORTHO05D007718 1.8e-21 105.9 106 54.7
Psat2g174760 Pisum sativum HOM05D006197 ORTHO05D007718 1.8e-21 105.9 105 55.2
VMungo1215G3393 Vigna mungo HOM05D006197 ORTHO05D007718 5.2e-21 104.4 106 55.7
Cc08_g02050 Coffea canephora HOM05D006197 ORTHO05D007718 6.7e-21 104.0 67 76.1
Cc08_g01990 Coffea canephora HOM05D006197 ORTHO05D007718 1.5e-20 102.8 67 74.6
TWI15G0656 Tripterygium wilfordii HOM05D006197 ORTHO05D007718 2.6e-20 102.1 101 57.4
CsaV3_3G049530 Cucumis sativus L. HOM05D006197 ORTHO05D007718 3.3e-20 101.7 101 52.5
Ah.12g053650 Amaranthus hybridus HOM05D006197 ORTHO05D007718 4.4e-20 101.3 100 59.0
Lalb_Chr09g0323941 Lupinus albus HOM05D006197 ORTHO05D007718 4.4e-20 101.3 78 66.7
MELO3C003373.2 Cucumis melo HOM05D006197 ORTHO05D007718 9.7e-20 100.1 100 52.0
TPR.G6747 Trifolium pratense HOM05D006197 ORTHO05D007718 3.7e-19 98.2 62 72.6
BolC8t51081H Brassica oleracea HOM05D000403 ORTHO05D004426 1.4e-18 96.3 60 71.7
Duzib084G1370 Durio zibethinus HOM05D006197 ORTHO05D007718 1.8e-18 95.9 98 54.1
Phvul.002G003700 Phaseolus vulgaris HOM05D006197 ORTHO05D007718 2.4e-18 95.5 101 53.5
Sc01g0007760 Simmondsia chinensis HOM05D006197 ORTHO05D007718 1.2e-17 93.2 61 75.4
Cc08_g01910 Coffea canephora HOM05D006197 ORTHO05D007718 2.0e-17 92.4 98 53.1
Mapoly0127s0016 Marchantia polymorpha HOM05D006197 ORTHO05D007718 1.0e-16 90.1 84 52.4
Os05g0500450 Oryza sativa ssp. japonica HOM05D006197 ORTHO05D007718 3.8e-16 88.2 101 48.5
Nn1g08520 Nelumbo nucifera HOM05D006197 ORTHO05D007718 2.5e-15 85.5 93 51.6
AagrBONN_evm.TU.Sc2ySwM_368.296 Anthoceros agrestis HOM05D006197 ORTHO05D007718 3.2e-15 85.1 54 66.7
Eucgr.C01972 Eucalyptus grandis HOM05D006197 ORTHO05D007718 2.1e-14 82.4 61 59.0
Mapoly0046s0110 Marchantia polymorpha HOM05D006197 ORTHO05D007718 4.0e-13 78.2 82 46.3
CBR_g8168 Chara braunii HOM05D006197 ORTHO05D007718 6.8e-13 77.4 55 69.1
CAN.G799.18 Capsicum annuum HOM05D006197 ORTHO05D007718 2.0e-12 75.9 55 67.3
Pp3c14_9970 Physcomitrium patens HOM05D006197 ORTHO05D007718 4.4e-12 74.7 65 56.9
SMO119G0374 Selaginella moellendorffii HOM05D006197 ORTHO05D007718 3.1e-10 68.6 78 50.0
Migut.E01523 Erythranthe guttata HOM05D006197 ORTHO05D007718 4.1e-10 68.2 71 53.5
Migut.E01526 Erythranthe guttata HOM05D006197 ORTHO05D007718 5.4e-10 67.8 71 52.1
Cc08_g01940 Coffea canephora HOM05D000011 ORTHO05D000157 1.5e-07 59.7 32 78.1
CDE05G1960 Ceratophyllum demersum HOM05D006197 ORTHO05D007718 3.6e-06 55.1 62 50.0


User provided reference genes

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