Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G4925 Papaver somniferum HOM05D007349 ORTHO05D009317 2.9e-131 471.9 231 100.0
PSO832G0714 Papaver somniferum HOM05D007349 ORTHO05D009317 4.4e-95 351.7 197 89.8
Nn3g19440 Nelumbo nucifera HOM05D007349 ORTHO05D009317 4.4e-47 192.2 252 48.0
Dinv29581 Davidia involucrata HOM05D007349 ORTHO05D009317 3.5e-44 182.6 230 47.4
Dinv29576 Davidia involucrata HOM05D007349 ORTHO05D009317 1.3e-43 180.6 230 47.0
Aqoxy5G00063 Aquilegia oxysepala HOM05D007349 ORTHO05D009317 5.1e-43 178.7 233 49.4
GSVIVG01029086001 Vitis vinifera HOM05D007349 ORTHO05D009317 1.5e-42 177.2 230 47.4
QL06p023778 Quercus lobata HOM05D007349 ORTHO05D009317 9.0e-40 167.9 258 41.9
CiPaw.01G123800 Carya illinoinensis HOM05D007349 ORTHO05D009317 1.2e-39 167.5 245 43.3
Cfa011815 Carpinus fangiana HOM05D007349 ORTHO05D009317 1.4e-37 160.6 237 43.5
MBI07_g23672_MAGBIO Magnolia biondii HOM05D007349 ORTHO05D009317 3.2e-37 159.5 231 46.3
ClCG05G003470 Citrullus lanatus HOM05D007349 ORTHO05D009317 1.2e-36 157.5 234 41.9
CSS0029747 Camellia sinensis var. sinensis HOM05D007349 ORTHO05D009317 6.0e-36 155.2 230 43.5
Hma1.2p1_2958F.1_g330790 Hydrangea macrophylla HOM05D007349 ORTHO05D009317 6.0e-36 155.2 229 41.9
PGR142G2055 Punica granatum HOM05D007349 ORTHO05D009317 4.3e-34 149.1 229 40.6
Lsat_1_v5_gn_6_59420 Lactuca sativa HOM05D007349 ORTHO05D009317 9.6e-34 147.9 214 43.9
HanXRQChr07g0185641 Helianthus annuus HOM05D007349 ORTHO05D009317 2.1e-33 146.7 230 39.1
CsaV3_3G011130 Cucumis sativus L. HOM05D007349 ORTHO05D009317 4.8e-33 145.6 239 38.9
Manes.03G149400 Manihot esculenta HOM05D007349 ORTHO05D009317 1.1e-32 144.4 237 40.9
Thecc.04G207000 Theobroma cacao HOM05D007349 ORTHO05D009317 2.4e-32 143.3 235 43.4
Haze_11590 Corylus avellana HOM05D007349 ORTHO05D009317 3.1e-32 142.9 154 54.5
Ciclev10005791m.g Citrus clementina HOM05D007349 ORTHO05D009317 1.2e-31 141.0 248 41.1
TAR103G0001 Trochodendron aralioides HOM05D007349 ORTHO05D009317 3.4e-31 139.4 83 75.9
Sed0005273 Sechium edule HOM05D007349 ORTHO05D009317 7.6e-31 138.3 242 39.3
Gorai.006G056500 Gossypium raimondii HOM05D007349 ORTHO05D009317 1.3e-30 137.5 232 41.8
Potri.003G177900 Populus trichocarpa HOM05D007349 ORTHO05D009317 1.3e-30 137.5 271 36.9
Duzib212G0593 Durio zibethinus HOM05D007349 ORTHO05D009317 2.2e-30 136.7 232 39.7
Gohir.D09G052924 Gossypium hirsutum HOM05D007349 ORTHO05D009317 1.1e-29 134.4 232 41.4
TWI09G1137 Tripterygium wilfordii HOM05D007349 ORTHO05D009317 1.1e-29 134.4 240 38.3
DCAR_024489 Daucus carota HOM05D007349 ORTHO05D009317 1.4e-29 134.0 236 39.4
Gohir.A09G052212 Gossypium hirsutum HOM05D007349 ORTHO05D009317 1.4e-29 134.0 232 40.9
CANSAT78G2317 Cannabis sativa HOM05D007349 ORTHO05D009317 2.4e-29 133.3 223 42.2
MELO3C006324.2 Cucumis melo HOM05D007349 ORTHO05D009317 2.4e-29 133.3 246 35.4
Rhsim09G0053700 Rhododendron simsii HOM05D007349 ORTHO05D009317 4.2e-29 132.5 236 39.4
EL10Ac3g06899 Beta vulgaris HOM05D007349 ORTHO05D009317 7.1e-29 131.7 238 36.1
Sabra03G0130400 Salix brachista HOM05D007349 ORTHO05D009317 6.0e-28 128.6 279 35.8
arahy.Tifrunner.gnm1.ann1.FV8RA9 Arachis hypogaea HOM05D007349 ORTHO05D009317 5.1e-27 125.6 248 38.3
VMungo0720G2898 Vigna mungo HOM05D007349 ORTHO05D009317 6.7e-27 125.2 230 39.1
Ca_10404_v3 Cicer arietinum L. HOM05D007349 ORTHO05D009317 8.7e-27 124.8 245 39.2
Lj5g0019311 Lotus japonicus HOM05D007349 ORTHO05D009317 8.7e-27 124.8 241 39.4
Lalb_Chr21g0312631 Lupinus albus HOM05D007349 ORTHO05D009317 1.5e-26 124.0 245 40.4
Cc03_g07560 Coffea canephora HOM05D007349 ORTHO05D009317 1.9e-26 123.6 240 37.9
Cpa.g.sc59.118 Carica papaya HOM05D007349 ORTHO05D009317 2.5e-26 123.2 246 37.8
ECA248G1485 Erigeron canadensis HOM05D007349 ORTHO05D009317 5.6e-26 122.1 209 40.7
Eucgr.H02845 Eucalyptus grandis HOM05D007349 ORTHO05D009317 5.6e-26 122.1 209 39.2
Medtr1g090010 Medicago truncatula HOM05D007349 ORTHO05D009317 1.6e-25 120.6 247 38.5
Phvul.007G134400 Phaseolus vulgaris HOM05D007349 ORTHO05D009317 4.8e-25 119.0 237 39.2
ATR0329G016 Amborella trichopoda HOM05D007349 ORTHO05D009317 6.2e-25 118.6 239 38.9
Hund19205 Selenicereus undatus HOM05D007349 ORTHO05D009317 5.3e-24 115.5 229 38.0
MD04G1004500 Malus domestica HOM05D007349 ORTHO05D009317 9.0e-24 114.8 211 37.4
RcHm_v2.0_Chr4g0385541 Rosa chinensis HOM05D007349 ORTHO05D009317 9.0e-24 114.8 238 35.7
Ah.13g075780 Amaranthus hybridus HOM05D007349 ORTHO05D009317 1.5e-23 114.0 138 41.3
SalBow3G0646 Salvia bowleyana HOM05D007349 ORTHO05D009317 4.5e-23 112.5 247 34.4
Psat0s3951g0040 Pisum sativum HOM05D007349 ORTHO05D009317 1.3e-22 110.9 232 36.2
Oeu026866.1 Olea europaea HOM05D007349 ORTHO05D009317 1.7e-22 110.5 277 31.4
FAN12G2695 Fragaria x ananassa HOM05D007349 ORTHO05D009317 2.2e-22 110.2 188 39.9
Peaxi162Scf00938g00312 Petunia axillaris HOM05D007349 ORTHO05D009317 2.2e-22 110.2 74 63.5
RcHm_v2.0_Chr6g0244431 Rosa chinensis HOM05D007349 ORTHO05D009317 3.8e-22 109.4 190 38.4
Nitab4.5_0008389g0020 Nicotiana tabacum HOM05D007349 ORTHO05D009317 4.9e-22 109.0 251 35.5
AT4G13690 Arabidopsis thaliana HOM05D007349 ORTHO05D009317 1.1e-21 107.8 256 35.2
arahy.Tifrunner.gnm1.ann1.X6WBXQ Arachis hypogaea HOM05D007349 ORTHO05D009317 3.2e-21 106.3 140 45.7
Sopen12g033040 Solanum pennellii HOM05D007349 ORTHO05D009317 5.5e-21 105.5 74 63.5
FvH4_4g00420 Fragaria vesca HOM05D007349 ORTHO05D009317 7.1e-21 105.1 188 38.8
Solyc12g098220.2 Solanum lycopersicum HOM05D007349 ORTHO05D009317 2.1e-20 103.6 74 62.2
PGSC0003DMG400016859 Solanum tuberosum HOM05D007349 ORTHO05D009317 2.7e-20 103.2 200 34.0
AUR62015355 Chenopodium quinoa HOM05D007349 ORTHO05D009317 6.0e-20 102.1 136 44.9
MSTRG.21955 Avicennia marina HOM05D007349 ORTHO05D009317 7.9e-20 101.7 77 57.1
Glyma.10G192600 Glycine max HOM05D007349 ORTHO05D009317 1.0e-19 101.3 232 38.4
Carub.0007s2878 Capsella rubella HOM05D007349 ORTHO05D009317 1.8e-19 100.5 81 60.5
AL7G42820 Arabidopsis lyrata HOM05D007349 ORTHO05D009317 3.0e-19 99.8 259 34.4
CARHR219460 Cardamine hirsuta HOM05D007349 ORTHO05D009317 3.0e-19 99.8 270 33.3
AUR62012020 Chenopodium quinoa HOM05D007349 ORTHO05D009317 3.9e-19 99.4 227 33.9
Thhalv10026053m.g Eutrema salsugineum HOM05D007349 ORTHO05D009317 6.7e-19 98.6 257 34.6
Aa31LG9G3970 Aethionema arabicum HOM05D007349 ORTHO05D009317 1.9e-18 97.1 280 32.1
Sp7g11450 Schrenkiella parvula HOM05D007349 ORTHO05D009317 2.5e-18 96.7 258 33.3
BolC4t25802H Brassica oleracea HOM05D007349 ORTHO05D009317 3.3e-18 96.3 263 34.2
FAN22G0302 Fragaria x ananassa HOM05D007349 ORTHO05D009317 3.3e-18 96.3 208 36.1
C04p42240 Brassica napus HOM05D007349 ORTHO05D009317 4.3e-18 95.9 263 34.2
TPR.G13407 Trifolium pratense HOM05D007349 ORTHO05D009317 4.3e-18 95.9 257 32.7
BcaC02g09398 Brassica carinata HOM05D007349 ORTHO05D009317 5.6e-18 95.5 263 34.2
Prupe.1G004200 Prunus persica HOM05D007349 ORTHO05D009317 5.6e-18 95.5 257 29.6
BcaB03g16060 Brassica carinata HOM05D007349 ORTHO05D009317 9.6e-18 94.7 79 59.5
Glyma.20G197951 Glycine max HOM05D007349 ORTHO05D009317 1.3e-17 94.4 88 60.2
THA.LOC104808722 Tarenaya hassleriana HOM05D007349 ORTHO05D009317 1.3e-17 94.4 253 31.6
Zm00001eb046010 Zea mays HOM05D007349 ORTHO05D009317 4.8e-17 92.4 182 36.8
SGA_v2.0_scaffold31G12592 Striga asiatica HOM05D007349 ORTHO05D009317 6.2e-17 92.0 76 55.3
unitig_8.g4490 Utricularia gibba HOM05D007349 ORTHO05D009317 8.2e-17 91.7 168 34.5
vmacro00487 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 1.1e-16 91.3 237 34.2
A04p08500 Brassica napus HOM05D007349 ORTHO05D009317 2.0e-15 87.0 254 33.1
Migut.N00367 Erythranthe guttata HOM05D007349 ORTHO05D009317 2.0e-15 87.0 45 75.6
TAR636G1730 Trochodendron aralioides HOM05D007349 ORTHO05D009317 2.9e-14 83.2 41 80.5
BraA04t16541Z Brassica rapa HOM05D007349 ORTHO05D009317 1.1e-13 81.3 252 31.7
Nitab4.5_0000676g0280 Nicotiana tabacum HOM05D007349 ORTHO05D009317 1.2e-12 77.8 231 31.2
SHI01057 Sapria himalayana HOM05D007349 ORTHO05D009317 1.8e-11 73.9 80 48.8
Pp3c2_23160 Physcomitrium patens HOM05D007349 ORTHO05D009317 9.0e-08 61.6 70 47.1
Dinv29577 Davidia involucrata HOM05D007349 ORTHO05D009317 2.0e-07 60.5 113 43.4


User provided reference genes

Program Settings