Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 6.1e-205 717.2 355 100.0
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 1.7e-183 646.0 325 97.8
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 1.5e-147 526.6 322 74.8
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.1e-145 520.4 322 75.8
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 1.0e-143 513.8 322 75.5
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 5.6e-142 508.1 324 72.8
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 4.7e-141 505.0 313 76.7
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 4.7e-141 505.0 311 75.9
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 4.7e-141 505.0 322 74.5
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 1.2e-139 500.4 324 71.3
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 3.4e-139 498.8 324 71.0
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 1.9e-137 493.0 322 72.4
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 1.9e-137 493.0 322 72.0
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 1.9e-137 493.0 311 74.9
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 4.2e-137 491.9 325 70.5
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 5.4e-137 491.5 311 74.9
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 5.4e-137 491.5 316 72.2
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 5.4e-137 491.5 316 72.2
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 1.2e-136 490.3 322 72.0
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 2.3e-135 486.1 309 74.8
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 3.0e-135 485.7 322 72.0
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 3.9e-135 485.3 339 68.7
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 3.9e-135 485.3 309 74.4
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 6.6e-135 484.6 325 69.8
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 7.3e-134 481.1 314 72.9
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.3e-133 480.3 314 72.6
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 1.6e-133 479.9 315 72.1
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.6e-133 479.9 309 73.8
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 2.8e-133 479.2 314 72.3
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 3.6e-133 478.8 313 72.2
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 6.2e-133 478.0 310 72.3
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 8.1e-133 477.6 312 72.8
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 1.4e-132 476.9 322 71.4
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.4e-132 476.9 315 71.4
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 4.0e-132 475.3 314 71.7
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 9.0e-132 474.2 313 71.9
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 2.0e-131 473.0 314 71.3
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 2.6e-131 472.6 323 71.5
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 9.9e-131 470.7 316 71.2
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 9.9e-131 470.7 314 70.7
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 9.9e-131 470.7 315 70.5
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 1.3e-130 470.3 316 70.9
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 1.3e-130 470.3 316 70.9
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 2.2e-130 469.5 312 72.8
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 3.8e-130 468.8 312 71.5
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 3.8e-130 468.8 313 70.9
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 1.9e-129 466.5 315 69.8
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 4.2e-129 465.3 314 71.3
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 1.6e-128 463.4 313 68.4
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 1.0e-127 460.7 313 69.3
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 1.0e-127 460.7 309 70.6
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 6.7e-127 458.0 311 68.5
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 1.5e-126 456.8 313 69.3
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 1.9e-126 456.4 313 69.0
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 1.9e-126 456.4 342 65.8
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 3.3e-126 455.7 310 68.1
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 4.3e-126 455.3 315 70.2
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 5.6e-126 454.9 333 67.9
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 1.6e-125 453.4 310 69.4
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 1.6e-125 453.4 323 65.6
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 4.8e-125 451.8 277 77.6
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 8.1e-125 451.1 323 66.3
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 8.1e-125 451.1 321 66.7
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 8.4e-122 441.0 341 62.8
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 5.5e-121 438.3 310 65.5
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 2.7e-120 436.0 290 70.3
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 1.8e-119 433.3 292 71.6
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 1.8e-119 433.3 309 66.3
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 3.0e-119 432.6 325 64.3
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 3.0e-119 432.6 309 66.7
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 1.5e-118 430.3 309 67.6
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 2.5e-118 429.5 309 66.3
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 5.6e-118 428.3 309 67.3
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.3e-117 427.2 340 60.6
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 3.7e-117 425.6 309 65.7
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 4.8e-117 425.2 283 72.4
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 1.8e-116 423.3 309 66.7
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 6.9e-116 421.4 309 64.4
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 2.2e-114 416.4 310 64.8
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 2.1e-112 409.8 274 73.0
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 1.5e-110 403.7 322 60.2
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 4.3e-110 402.1 315 58.7
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 2.8e-109 399.4 313 59.7
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 5.3e-108 395.2 309 58.9
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 7.4e-102 374.8 311 60.8
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 1.4e-100 370.5 291 58.8
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 3.1e-100 369.4 333 57.4
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 6.9e-100 368.2 254 69.3
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 3.4e-99 365.9 234 74.8
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 5.0e-98 362.1 315 57.1
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 6.1e-96 355.1 234 71.8
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 2.6e-94 349.7 308 53.6
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 1.3e-93 347.4 307 52.8
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 2.3e-87 326.6 308 49.0
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 2.3e-87 326.6 308 49.0
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.5e-86 323.9 307 49.2
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.4e-86 321.6 307 49.8
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 9.1e-84 314.7 307 48.5
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 1.7e-82 310.5 257 58.8
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.0e-82 308.9 307 48.9
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.9e-81 307.0 313 46.6
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.9e-81 307.0 305 48.5
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 2.5e-81 306.6 323 49.5
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 4.1e-76 289.3 220 63.2
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 8.3e-69 265.0 315 44.8
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 3.5e-67 259.6 318 42.5
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 1.0e-63 248.1 309 44.3
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 1.5e-57 227.6 213 52.1
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 1.6e-35 154.5 163 50.3
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 1.4e-31 141.4 320 33.1
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.9e-25 120.9 114 50.9


User provided reference genes

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