Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G4696 Papaver somniferum HOM05D004267 ORTHO05D005267 1.4e-95 352.8 167 100.0
PSO210G6502 Papaver somniferum HOM05D004267 ORTHO05D005267 2.0e-94 349.0 167 98.8
TAR636G0904 Trochodendron aralioides HOM05D004267 ORTHO05D005267 3.0e-69 265.4 167 69.5
Phvul.001G033101 Phaseolus vulgaris HOM05D004267 ORTHO05D005267 1.9e-68 262.7 167 68.3
Actinidia14699 Actinidia chinensis HOM05D004267 ORTHO05D005267 7.3e-68 260.8 164 69.5
VMungo0647G2384 Vigna mungo HOM05D004267 ORTHO05D005267 3.6e-67 258.5 167 65.9
Glyma.14G092300 Glycine max HOM05D004267 ORTHO05D005267 1.1e-66 256.9 167 65.9
GSVIVG01035339001 Vitis vinifera HOM05D004267 ORTHO05D005267 1.8e-66 256.1 167 67.7
Glyma.17G231200 Glycine max HOM05D004267 ORTHO05D005267 2.4e-66 255.8 167 66.5
Psat6g019000 Pisum sativum HOM05D004267 ORTHO05D005267 3.1e-66 255.4 167 65.3
ATR0789G016 Amborella trichopoda HOM05D004267 ORTHO05D005267 4.0e-66 255.0 167 67.1
CSS0026627 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D005267 4.0e-66 255.0 167 66.5
CSS0030161 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D000002 4.0e-66 255.0 167 66.5
Ca_13187_v3 Cicer arietinum L. HOM05D004267 ORTHO05D005267 9.0e-66 253.8 167 64.1
Aqoxy7G03943 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 1.2e-65 253.4 161 65.8
THA.LOC104803799 Tarenaya hassleriana HOM05D004267 ORTHO05D005267 1.2e-65 253.4 167 65.9
Actinidia18200 Actinidia chinensis HOM05D004267 ORTHO05D005267 2.6e-65 252.3 164 66.5
MSTRG.1674 Avicennia marina HOM05D004267 ORTHO05D005267 2.6e-65 252.3 167 67.1
Lalb_Chr14g0367901 Lupinus albus HOM05D004267 ORTHO05D005267 2.6e-65 252.3 167 65.3
Haze_18224 Corylus avellana HOM05D004267 ORTHO05D005267 4.5e-65 251.5 167 64.1
Medtr1g016900 Medicago truncatula HOM05D004267 ORTHO05D005267 9.9e-65 250.4 167 65.3
QL02p001694 Quercus lobata HOM05D004267 ORTHO05D005267 1.3e-64 250.0 166 65.1
Cfa017926 Carpinus fangiana HOM05D004267 ORTHO05D005267 1.7e-64 249.6 167 63.5
TPR.G12986 Trifolium pratense HOM05D004267 ORTHO05D005267 1.7e-64 249.6 167 64.7
Lj5g0002830 Lotus japonicus HOM05D004267 ORTHO05D005267 3.8e-64 248.4 167 63.5
Atru.chr7.2026 Acer truncatum HOM05D004267 ORTHO05D005267 6.4e-64 247.7 167 64.1
PGR031G1882 Punica granatum HOM05D004267 ORTHO05D005267 1.1e-63 246.9 167 67.1
Nn8g38967 Nelumbo nucifera HOM05D004267 ORTHO05D005267 1.4e-63 246.5 167 63.5
Manes.03G046100 Manihot esculenta HOM05D004267 ORTHO05D005267 1.9e-63 246.1 167 63.5
CsaV3_2G025720 Cucumis sativus L. HOM05D004267 ORTHO05D005267 2.4e-63 245.7 167 64.7
Gohir.A06G090500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 2.4e-63 245.7 167 67.1
Gohir.D06G089500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 2.4e-63 245.7 167 67.1
Gorai.010G103400 Gossypium raimondii HOM05D004267 ORTHO05D005267 2.4e-63 245.7 167 67.1
SGA_v2.0_scaffold88G27217 Striga asiatica HOM05D004267 ORTHO05D005267 5.4e-63 244.6 167 63.5
AT4G32930 Arabidopsis thaliana HOM05D004267 ORTHO05D005267 9.3e-63 243.8 168 64.9
ClCG08G016900 Citrullus lanatus HOM05D004267 ORTHO05D005267 9.3e-63 243.8 167 64.7
Hma1.2p1_1213F.1_g267510 Hydrangea macrophylla HOM05D004267 ORTHO05D005267 9.3e-63 243.8 167 63.5
Cc08_g10140 Coffea canephora HOM05D004267 ORTHO05D005267 1.2e-62 243.4 167 63.5
AL7G18760 Arabidopsis lyrata HOM05D004267 ORTHO05D005267 2.1e-62 242.7 168 64.3
Rhsim07G0144100 Rhododendron simsii HOM05D004267 ORTHO05D005267 2.1e-62 242.7 167 63.5
arahy.Tifrunner.gnm1.ann1.35PLQF Arachis hypogaea HOM05D004267 ORTHO05D005267 2.7e-62 242.3 166 62.0
Carub.0007s0755 Capsella rubella HOM05D004267 ORTHO05D005267 3.5e-62 241.9 168 64.3
Ciclev10009729m.g Citrus clementina HOM05D004267 ORTHO05D005267 4.6e-62 241.5 166 63.9
Duzib187G0506 Durio zibethinus HOM05D004267 ORTHO05D005267 7.9e-62 240.7 167 64.1
TAR624G0139 Trochodendron aralioides HOM05D004267 ORTHO05D005267 7.9e-62 240.7 168 61.9
CiPaw.15G042300 Carya illinoinensis HOM05D004267 ORTHO05D005267 1.3e-61 240.0 167 61.7
Lj8A557T6 Lonicera japonica HOM05D004267 ORTHO05D005267 1.3e-61 240.0 167 64.7
TWI34G0953 Tripterygium wilfordii HOM05D004267 ORTHO05D005267 1.3e-61 240.0 167 64.1
Gorai.009G047300 Gossypium raimondii HOM05D004267 ORTHO05D005267 1.8e-61 239.6 167 60.5
Gohir.A05G044300 Gossypium hirsutum HOM05D004267 ORTHO05D005267 2.3e-61 239.2 167 59.9
Sp7g30710 Schrenkiella parvula HOM05D004267 ORTHO05D005267 3.0e-61 238.8 168 63.1
Migut.A00159 Erythranthe guttata HOM05D004267 ORTHO05D005267 3.9e-61 238.4 167 62.9
Sed0007787 Sechium edule HOM05D004267 ORTHO05D005267 5.1e-61 238.0 167 62.9
A03p61690 Brassica napus HOM05D004267 ORTHO05D005267 6.7e-61 237.7 168 63.7
C07p59420 Brassica napus HOM05D004267 ORTHO05D005267 6.7e-61 237.7 168 63.7
Thhalv10025837m.g Eutrema salsugineum HOM05D004267 ORTHO05D005267 6.7e-61 237.7 168 63.1
vmacro05276 Vaccinium macrocarpon HOM05D004267 ORTHO05D005267 1.5e-60 236.5 174 61.5
BolC1t00557H Brassica oleracea HOM05D004267 ORTHO05D005267 1.9e-60 236.1 168 63.1
BraA01t00509Z Brassica rapa HOM05D004267 ORTHO05D005267 1.9e-60 236.1 168 63.1
A01p05350 Brassica napus HOM05D004267 ORTHO05D005267 2.5e-60 235.7 168 63.1
BcaC09g52093 Brassica carinata HOM05D004267 ORTHO05D005267 3.3e-60 235.3 168 63.1
C01p05770 Brassica napus HOM05D004267 ORTHO05D005267 3.3e-60 235.3 168 63.1
Aa31sc248G70 Aethionema arabicum HOM05D004267 ORTHO05D005267 7.4e-60 234.2 168 63.7
Potri.006G233500 Populus trichocarpa HOM05D004267 ORTHO05D005267 1.3e-59 233.4 167 62.9
Eucgr.C00632 Eucalyptus grandis HOM05D004267 ORTHO05D005267 1.6e-59 233.0 167 61.1
Aa31LG2G6480 Aethionema arabicum HOM05D004267 ORTHO05D005267 2.1e-59 232.6 168 64.3
Thecc.09G050400 Theobroma cacao HOM05D004267 ORTHO05D005267 2.1e-59 232.6 167 60.5
Duzib168G1102 Durio zibethinus HOM05D004267 ORTHO05D005267 2.8e-59 232.3 167 61.1
Oeu036354.1 Olea europaea HOM05D004267 ORTHO05D005267 4.8e-59 231.5 167 61.7
BraA03t15208Z Brassica rapa HOM05D004267 ORTHO05D005267 1.8e-58 229.6 178 60.1
EL10Ac2g03945 Beta vulgaris HOM05D004267 ORTHO05D005267 2.4e-58 229.2 167 60.5
COL.COLO4_21022 Corchorus olitorius HOM05D004267 ORTHO05D005267 5.3e-58 228.0 189 57.1
CANSAT01G0851 Cannabis sativa HOM05D004267 ORTHO05D005267 2.0e-57 226.1 167 60.5
CANSAT01G1320 Cannabis sativa HOM05D004267 ORTHO05D005267 2.0e-57 226.1 167 60.5
SalBow4G2144 Salvia bowleyana HOM05D004267 ORTHO05D005267 2.6e-57 225.7 167 58.7
HanXRQChr17g0539351 Helianthus annuus HOM05D004267 ORTHO05D005267 7.6e-57 224.2 165 59.4
Sc06g0000890 Simmondsia chinensis HOM05D004267 ORTHO05D005267 9.9e-57 223.8 167 59.9
Lsat_1_v5_gn_3_28241 Lactuca sativa HOM05D004267 ORTHO05D005267 1.3e-56 223.4 165 58.2
Peaxi162Scf00247g00612 Petunia axillaris HOM05D004267 ORTHO05D005267 3.8e-56 221.9 167 58.1
MBI04_g12184_MAGBIO Magnolia biondii HOM05D004267 ORTHO05D005267 4.9e-56 221.5 189 56.1
RcHm_v2.0_Chr6g0310421 Rosa chinensis HOM05D004267 ORTHO05D005267 8.4e-56 220.7 166 58.4
Nitab4.5_0021628g0010 Nicotiana tabacum HOM05D004267 ORTHO05D005267 1.4e-55 219.9 167 56.9
unitig_578.g16576 Utricularia gibba HOM05D004267 ORTHO05D005267 1.9e-55 219.5 164 58.5
FAN20G1958 Fragaria x ananassa HOM05D004267 ORTHO05D005267 3.2e-55 218.8 166 57.2
FAN24G1314 Fragaria x ananassa HOM05D004267 ORTHO05D005267 4.2e-55 218.4 166 57.2
FvH4_2g32280 Fragaria vesca HOM05D004267 ORTHO05D005267 5.5e-55 218.0 166 57.2
Hund03363 Selenicereus undatus HOM05D004267 ORTHO05D005267 9.3e-55 217.2 189 55.6
Prupe.1G415500 Prunus persica HOM05D004267 ORTHO05D005267 1.2e-54 216.9 164 54.3
SEGI_14756 Sequoiadendron giganteum HOM05D004267 ORTHO05D005267 1.2e-54 216.9 167 57.5
Sc09g0009630 Simmondsia chinensis HOM05D004267 ORTHO05D005267 1.6e-54 216.5 167 58.1
DCAR_000778 Daucus carota HOM05D004267 ORTHO05D005267 2.7e-54 215.7 167 59.9
PGSC0003DMG400025516 Solanum tuberosum HOM05D004267 ORTHO05D005267 7.9e-54 214.2 167 56.3
Solyc11g070050.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 1.3e-53 213.4 167 56.3
Sopen11g028730 Solanum pennellii HOM05D004267 ORTHO05D005267 1.3e-53 213.4 167 56.3
Zm00001eb356880 Zea mays HOM05D004267 ORTHO05D005267 1.3e-53 213.4 165 57.6
ECA246G5265 Erigeron canadensis HOM05D004267 ORTHO05D005267 2.3e-53 212.6 165 57.0
HPP92_004580 Vanilla planifolia HOM05D004267 ORTHO05D005267 2.3e-53 212.6 166 57.2
Dinv27959 Davidia involucrata HOM05D004267 ORTHO05D005267 3.0e-53 212.2 167 56.9
arahy.Tifrunner.gnm1.ann1.97AHJW Arachis hypogaea HOM05D004267 ORTHO05D005267 3.9e-53 211.8 203 49.3
MELO3C010766.2 Cucumis melo HOM05D004267 ORTHO05D005267 8.7e-53 210.7 137 67.2
Sabra06G0181900 Salix brachista HOM05D004267 ORTHO05D005267 1.1e-52 210.3 219 47.0
Aqoxy408s001 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 1.9e-52 209.5 126 69.0
FAN15G3631 Fragaria x ananassa HOM05D004267 ORTHO05D005267 4.3e-52 208.4 179 53.1
CAN.G309.57 Capsicum annuum HOM05D004267 ORTHO05D005267 5.6e-52 208.0 168 56.0
Os01g0565600 Oryza sativa ssp. japonica HOM05D004267 ORTHO05D005267 4.8e-51 204.9 166 53.0
Solyc11g070060.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 4.0e-50 201.8 167 55.7
Hund19479 Selenicereus undatus HOM05D004267 ORTHO05D005267 2.1e-46 189.5 176 51.1
BcaNung02146 Brassica carinata HOM05D004267 ORTHO05D005267 3.5e-46 188.7 126 64.3
CARHR240940 Cardamine hirsuta HOM05D004267 ORTHO05D005267 3.5e-46 188.7 135 61.5
Pp3c5_10040 Physcomitrium patens HOM05D004267 ORTHO05D005267 3.5e-46 188.7 167 53.3
CDE07G0102 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 7.9e-46 187.6 117 68.4
Mapoly0044s0101 Marchantia polymorpha HOM05D004267 ORTHO05D005267 1.8e-45 186.4 167 49.1
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 5.7e-44 181.4 131 57.3
FAN27G1738 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.3e-43 180.3 174 48.3
RcHm_v2.0_Chr6g0310431 Rosa chinensis HOM05D004267 ORTHO05D005267 6.3e-43 177.9 166 49.4
AUR62040201 Chenopodium quinoa HOM05D004267 ORTHO05D005267 5.3e-42 174.9 140 55.0
AUR62043052 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.5e-41 173.3 133 57.1
Nn6g35383 Nelumbo nucifera HOM05D004267 ORTHO05D005267 3.4e-41 172.2 127 60.6
DCAR_004449 Daucus carota HOM05D004267 ORTHO05D005267 1.1e-39 167.2 165 49.1
SMO117G0066 Selaginella moellendorffii HOM05D004267 ORTHO05D005267 2.5e-39 166.0 166 48.8
AUR62009204 Chenopodium quinoa HOM05D004267 ORTHO05D005267 4.2e-39 165.2 137 54.0
Gohir.D05G045900 Gossypium hirsutum HOM05D004267 ORTHO05D005267 1.6e-38 163.3 167 45.5
FvH4_2g32260 Fragaria vesca HOM05D004267 ORTHO05D005267 2.7e-38 162.5 164 47.0
DCAR_004448 Daucus carota HOM05D004267 ORTHO05D005267 3.6e-38 162.2 166 47.0
CDE07G1388 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 7.9e-38 161.0 101 68.3
MD08G1073900 Malus domestica HOM05D004267 ORTHO05D005267 6.7e-37 157.9 177 44.1
CBR_g18691 Chara braunii HOM05D004267 ORTHO05D005267 1.8e-34 149.8 165 44.2
Sopen11g028740 Solanum pennellii HOM05D004267 ORTHO05D005267 5.3e-34 148.3 167 44.9
AagrBONN_evm.TU.Sc2ySwM_344.4469 Anthoceros agrestis HOM05D004267 ORTHO05D005267 3.4e-33 145.6 125 52.0
Lsat_1_v5_gn_5_67680 Lactuca sativa HOM05D004267 ORTHO05D005267 4.5e-33 145.2 131 54.2
arahy.Tifrunner.gnm1.ann1.BB3MLG Arachis hypogaea HOM05D004267 ORTHO05D005267 8.5e-32 141.0 97 59.8
arahy.Tifrunner.gnm1.ann1.JED36R Arachis hypogaea HOM05D004267 ORTHO05D005267 8.5e-32 141.0 97 59.8
FAN15G2319 Fragaria x ananassa HOM05D004267 ORTHO05D005267 8.5e-32 141.0 151 45.7
FAN24G0417 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.9e-31 139.8 140 45.0
Cpa.g.sc78.12 Carica papaya HOM05D004267 ORTHO05D005267 1.0e-29 134.0 98 61.2
Zm00001eb159830 Zea mays HOM05D004267 ORTHO05D005267 4.4e-28 128.6 97 59.8
Aqoxy7G03867 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 1.1e-26 124.0 126 42.9
GSVIVG01016840001 Vitis vinifera HOM05D004267 ORTHO05D005267 2.9e-24 115.9 164 38.4
GSVIVG01016838001 Vitis vinifera HOM05D004267 ORTHO05D005267 5.0e-24 115.2 164 38.4
Rhsim01G0086000 Rhododendron simsii HOM05D004267 ORTHO05D005267 6.5e-24 114.8 80 62.5
Aqoxy7G03891 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 1.2e-22 110.5 92 52.2
Peaxi162Scf00545g00002 Petunia axillaris HOM05D004267 ORTHO05D005267 4.7e-22 108.6 105 52.4
BcaC07g42315 Brassica carinata HOM05D004267 ORTHO05D005267 1.0e-21 107.5 183 36.1
Oeu057699.1 Olea europaea HOM05D004267 ORTHO05D005267 3.7e-19 99.0 113 43.4
Peaxi162Scf00545g00001 Petunia axillaris HOM05D004267 ORTHO05D005267 3.1e-18 95.9 85 55.3
Cre09.g395800 Chlamydomonas reinhardtii HOM05D004267 ORTHO05D005267 1.2e-17 94.0 167 31.7
AUR62002213 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.2e-16 89.7 68 60.3
AUR62018016 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.2e-16 89.7 68 60.3
AUR62022800 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.2e-16 89.7 70 60.0
AUR62010512 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.9e-15 86.7 57 66.7
AUR62034857 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.7e-14 82.8 68 57.4
AUR62007889 Chenopodium quinoa HOM05D004267 ORTHO05D005267 3.6e-14 82.4 57 64.9
AUR62044607 Chenopodium quinoa HOM05D004267 ORTHO05D005267 6.1e-14 81.6 68 55.9
MCO11G136 Micromonas commoda HOM05D004267 ORTHO05D005267 1.7e-11 73.6 169 30.2
Nitab4.5_0001927g0070 Nicotiana tabacum HOM05D004267 ORTHO05D005267 5.3e-10 68.6 61 45.9
Nitab4.5_0001927g0060 Nicotiana tabacum HOM05D004267 ORTHO05D005267 1.3e-08 63.9 112 28.6
AUR62036408 Chenopodium quinoa HOM05D001707 ORTHO05D001694 1.9e-07 60.1 56 51.8
VMungo1196G0001 Vigna mungo HOM05D005620 ORTHO05D005267 1.2e-06 57.4 40 60.0
CAN.G1143.36 Capsicum annuum HOM05D001836 ORTHO05D001519 1.6e-06 57.0 55 40.0
AUR62038391 Chenopodium quinoa HOM05D004267 ORTHO05D005267 4.7e-06 55.5 40 60.0


User provided reference genes

Program Settings