Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G4684 Papaver somniferum HOM05D006979 ORTHO05D008857 7.1e-173 610.5 316 100.0
PSO210G5065 Papaver somniferum HOM05D006979 ORTHO05D008857 6.1e-156 554.3 319 92.2
TAR383G0452 Trochodendron aralioides HOM05D006979 ORTHO05D008857 4.0e-99 365.5 314 67.2
GSVIVG01016774001 Vitis vinifera HOM05D006979 ORTHO05D008857 6.4e-97 358.2 308 64.3
Aqoxy5G02291 Aquilegia oxysepala HOM05D006979 ORTHO05D008857 4.1e-96 355.5 319 60.8
Cfa003539 Carpinus fangiana HOM05D006979 ORTHO05D008857 6.6e-94 348.2 274 66.1
Dinv04035 Davidia involucrata HOM05D006979 ORTHO05D008857 2.1e-92 343.2 263 68.4
AUR62009880 Chenopodium quinoa HOM05D006979 ORTHO05D008857 8.1e-92 341.3 298 64.4
Potri.003G063800 Populus trichocarpa HOM05D006979 ORTHO05D008857 1.1e-91 340.9 273 64.8
vmacro15023 Vaccinium macrocarpon HOM05D006979 ORTHO05D008857 3.1e-91 339.3 312 59.9
CiPaw.01G219600 Carya illinoinensis HOM05D006979 ORTHO05D008857 8.9e-91 337.8 261 69.3
CSS0018635 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 2.0e-90 336.7 318 61.9
AUR62001490 Chenopodium quinoa HOM05D006979 ORTHO05D008857 2.0e-90 336.7 297 62.6
Rhsim08G0237900 Rhododendron simsii HOM05D006979 ORTHO05D008857 2.0e-90 336.7 310 57.7
Nitab4.5_0000189g0250 Nicotiana tabacum HOM05D006979 ORTHO05D008857 5.8e-90 335.1 272 64.3
CSS0026622 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 9.9e-90 334.3 318 61.0
Prupe.3G042700 Prunus persica HOM05D006979 ORTHO05D008857 1.3e-89 334.0 314 59.6
Atru.chr1.3953 Acer truncatum HOM05D006979 ORTHO05D008857 8.4e-89 331.3 302 58.3
Actinidia32181 Actinidia chinensis HOM05D006979 ORTHO05D008857 8.4e-89 331.3 301 62.1
Sabra03G0037400 Salix brachista HOM05D006979 ORTHO05D008857 8.4e-89 331.3 277 62.1
MD09G1184500 Malus domestica HOM05D006979 ORTHO05D008857 2.4e-88 329.7 288 60.4
Nitab4.5_0001199g0130 Nicotiana tabacum HOM05D006979 ORTHO05D008857 3.2e-88 329.3 272 62.1
CDE05G0714 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 5.4e-88 328.6 259 63.7
Ciclev10026147m.g Citrus clementina HOM05D006979 ORTHO05D008857 9.3e-88 327.8 308 59.7
CAN.G1368.7 Capsicum annuum HOM05D006979 ORTHO05D008857 2.1e-87 326.6 294 59.5
FvH4_6g34590 Fragaria vesca HOM05D006979 ORTHO05D008857 3.5e-87 325.9 263 64.3
FAN09G4734 Fragaria x ananassa HOM05D006979 ORTHO05D008857 3.5e-87 325.9 263 64.3
RcHm_v2.0_Chr2g0145111 Rosa chinensis HOM05D006979 ORTHO05D008857 4.6e-87 325.5 283 60.8
PGSC0003DMG400011606 Solanum tuberosum HOM05D006979 ORTHO05D008857 7.8e-87 324.7 267 63.3
Migut.D00941 Erythranthe guttata HOM05D006979 ORTHO05D008857 1.3e-86 323.9 295 60.0
SGA_v2.0_scaffold4G02061 Striga asiatica HOM05D006979 ORTHO05D008857 3.9e-86 322.4 293 58.7
Manes.11G021300 Manihot esculenta HOM05D006979 ORTHO05D008857 8.7e-86 321.2 269 62.1
Oeu015481.1 Olea europaea HOM05D006979 ORTHO05D008857 1.5e-85 320.5 302 57.3
Lj3g0022239 Lotus japonicus HOM05D006979 ORTHO05D008857 3.3e-85 319.3 268 61.6
Gorai.009G146700 Gossypium raimondii HOM05D006979 ORTHO05D008857 5.6e-85 318.5 289 61.2
Cpa.g.sc25.110 Carica papaya HOM05D006979 ORTHO05D008857 9.6e-85 317.8 290 60.3
Gohir.D05G142800 Gossypium hirsutum HOM05D006979 ORTHO05D008857 9.6e-85 317.8 289 61.2
Sed0019772 Sechium edule HOM05D006979 ORTHO05D008857 1.6e-84 317.0 266 63.5
CANSAT56G2284 Cannabis sativa HOM05D006979 ORTHO05D008857 2.8e-84 316.2 266 62.4
Sopen12g023760 Solanum pennellii HOM05D006979 ORTHO05D008857 2.8e-84 316.2 264 63.3
MBI19_g11849_MAGBIO Magnolia biondii HOM05D006979 ORTHO05D008857 3.6e-84 315.8 274 63.9
Glyma.16G005300 Glycine max HOM05D006979 ORTHO05D008857 6.2e-84 315.1 268 60.4
Duzib235G1224 Durio zibethinus HOM05D006979 ORTHO05D008857 1.1e-83 314.3 287 60.3
Thecc.06G118900 Theobroma cacao HOM05D006979 ORTHO05D008857 1.1e-83 314.3 288 60.1
QL05p008051 Quercus lobata HOM05D006979 ORTHO05D008857 1.8e-83 313.5 320 55.3
Glyma.07G036000 Glycine max HOM05D006979 ORTHO05D008857 9.0e-83 311.2 270 60.4
Phvul.010G133500 Phaseolus vulgaris HOM05D006979 ORTHO05D008857 9.0e-83 311.2 267 59.6
Lalb_Chr04g0263421 Lupinus albus HOM05D006979 ORTHO05D008857 1.2e-82 310.8 265 60.8
Medtr8g019510 Medicago truncatula HOM05D006979 ORTHO05D008857 1.2e-82 310.8 272 60.3
VMungo0331G0985 Vigna mungo HOM05D006979 ORTHO05D008857 2.0e-82 310.1 285 58.2
Lsat_1_v5_gn_5_135940 Lactuca sativa HOM05D006979 ORTHO05D008857 2.6e-82 309.7 270 58.9
Solyc12g049280.3 Solanum lycopersicum HOM05D006979 ORTHO05D008857 2.6e-82 309.7 251 64.9
Hund05741 Selenicereus undatus HOM05D006979 ORTHO05D008857 3.4e-82 309.3 320 53.4
COL.COLO4_30769 Corchorus olitorius HOM05D006979 ORTHO05D008857 4.4e-82 308.9 312 56.4
ECA234G1570 Erigeron canadensis HOM05D006979 ORTHO05D008857 1.7e-81 307.0 267 59.6
ATR0598G212 Amborella trichopoda HOM05D006979 ORTHO05D008857 2.2e-81 306.6 314 55.1
FAN05G0457 Fragaria x ananassa HOM05D006979 ORTHO05D008857 4.9e-81 305.4 244 66.0
Lj9A522T69 Lonicera japonica HOM05D006979 ORTHO05D008857 4.9e-81 305.4 254 65.0
TPR.G16442 Trifolium pratense HOM05D006979 ORTHO05D008857 1.1e-80 304.3 303 55.8
Eucgr.F03173 Eucalyptus grandis HOM05D006979 ORTHO05D008857 1.9e-80 303.5 275 58.2
SalBow7G2243 Salvia bowleyana HOM05D006979 ORTHO05D008857 1.9e-80 303.5 312 55.4
CsaV3_7G034520 Cucumis sativus L. HOM05D006979 ORTHO05D008857 2.4e-80 303.1 270 61.9
THA.LOC104813956 Tarenaya hassleriana HOM05D006979 ORTHO05D008857 1.2e-79 300.8 258 62.4
TWI31G0112 Tripterygium wilfordii HOM05D006979 ORTHO05D008857 2.7e-79 299.7 277 59.6
Peaxi162Scf00177g00513 Petunia axillaris HOM05D006979 ORTHO05D008857 1.0e-78 297.7 261 61.3
Os03g0410700 Oryza sativa ssp. japonica HOM05D006979 ORTHO05D008857 1.7e-78 297.0 255 61.6
Atru.chr1.3954 Acer truncatum HOM05D006979 ORTHO05D008857 3.9e-78 295.8 248 61.7
ClCG09G000940 Citrullus lanatus HOM05D006979 ORTHO05D008857 2.5e-77 293.1 314 53.2
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 5.6e-77 292.0 273 58.6
Haze_16022 Corylus avellana HOM05D006979 ORTHO05D008857 5.8e-74 282.0 312 53.5
BcaNung07150 Brassica carinata HOM05D006979 ORTHO05D008857 1.3e-73 280.8 278 55.4
Carub.0002s1948 Capsella rubella HOM05D006979 ORTHO05D008857 1.3e-73 280.8 270 54.4
Sc08g0005680 Simmondsia chinensis HOM05D006979 ORTHO05D008857 8.4e-73 278.1 311 52.1
Thhalv10018914m.g Eutrema salsugineum HOM05D006979 ORTHO05D008857 3.2e-72 276.2 274 55.1
PGR119G0938 Punica granatum HOM05D006979 ORTHO05D008857 5.4e-72 275.4 272 56.6
AL2G32310 Arabidopsis lyrata HOM05D006979 ORTHO05D008857 7.1e-72 275.0 271 53.9
Cc04_g01400 Coffea canephora HOM05D006979 ORTHO05D008857 1.2e-71 274.2 240 61.7
Gohir.A05G140600 Gossypium hirsutum HOM05D006979 ORTHO05D008857 3.5e-71 272.7 289 55.4
Aa31LG4G3010 Aethionema arabicum HOM05D006979 ORTHO05D008857 6.0e-71 271.9 317 52.4
C06p46960 Brassica napus HOM05D006979 ORTHO05D008857 6.0e-71 271.9 274 52.9
BolC6t39737H Brassica oleracea HOM05D006979 ORTHO05D008857 6.0e-71 271.9 274 52.9
Sp5g27700 Schrenkiella parvula HOM05D006979 ORTHO05D008857 1.8e-70 270.4 316 49.1
BcaC08g46707 Brassica carinata HOM05D006979 ORTHO05D008857 6.7e-70 268.5 274 52.6
A07p38800 Brassica napus HOM05D006979 ORTHO05D008857 5.6e-69 265.4 298 49.7
BraA07t31434Z Brassica rapa HOM05D006979 ORTHO05D008857 5.6e-69 265.4 298 49.7
Nn6g35601 Nelumbo nucifera HOM05D006979 ORTHO05D008857 6.9e-67 258.5 314 50.0
arahy.Tifrunner.gnm1.ann1.4E7AR5 Arachis hypogaea HOM05D006979 ORTHO05D008857 4.5e-66 255.8 275 52.7
arahy.Tifrunner.gnm1.ann1.IV001U Arachis hypogaea HOM05D006979 ORTHO05D008857 3.8e-65 252.7 275 52.4
Pp3c11_2100 Physcomitrium patens HOM05D006979 ORTHO05D008857 6.0e-63 245.4 250 51.6
Ca_05018_v3 Cicer arietinum L. HOM05D006979 ORTHO05D008857 5.3e-59 232.3 200 58.5
Psat4g183680 Pisum sativum HOM05D006979 ORTHO05D008857 6.9e-59 231.9 208 60.1
Zm00001eb019720 Zea mays HOM05D006979 ORTHO05D008857 3.4e-58 229.6 211 59.7
EL10Ac7g16405 Beta vulgaris HOM05D006979 ORTHO05D008857 1.3e-57 227.6 308 47.1
AT1G72640 Arabidopsis thaliana HOM05D006979 ORTHO05D008857 6.5e-57 225.3 240 51.7
Hma1.2p1_0496F.1_g166210 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 5.5e-56 222.2 173 67.1
SMO117G0249 Selaginella moellendorffii HOM05D006979 ORTHO05D008857 2.2e-49 200.3 281 44.1
AagrBONN_evm.TU.Sc2ySwM_362.1497 Anthoceros agrestis HOM05D006979 ORTHO05D008857 2.9e-49 199.9 202 54.0
CARHR065560 Cardamine hirsuta HOM05D006979 ORTHO05D008857 3.8e-49 199.5 184 55.4
Hma1.2p1_0496F.1_g166200 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 4.2e-48 196.1 213 55.4
FAN14G3231 Fragaria x ananassa HOM05D006979 ORTHO05D008857 4.3e-45 186.0 164 55.5
MELO3C024358.2 Cucumis melo HOM05D006979 ORTHO05D008857 1.8e-43 180.6 187 55.1
SEGI_25115 Sequoiadendron giganteum HOM05D006979 ORTHO05D008857 2.4e-35 153.7 133 57.1
Ah.08g216750 Amaranthus hybridus HOM05D006979 ORTHO05D008857 1.7e-33 147.5 192 48.4
Mapoly0030s0153 Marchantia polymorpha HOM05D006979 ORTHO05D008857 6.7e-30 135.6 144 51.4
MCO12G160 Micromonas commoda HOM05D006979 ORTHO05D008857 1.4e-19 101.3 281 32.7
CDE05G2075 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 7.7e-18 95.5 195 33.3
Cre02.g095133 Chlamydomonas reinhardtii HOM05D006979 ORTHO05D008857 1.9e-16 90.9 255 30.2
RcHm_v2.0_Chr6g0307231 Rosa chinensis HOM05D006979 ORTHO05D008857 4.4e-13 79.7 57 64.9
RcHm_v2.0_Chr3g0497381 Rosa chinensis HOM05D006979 ORTHO05D008857 4.9e-12 76.3 57 61.4
Medtr8g019490 Medicago truncatula HOM05D006979 ORTHO05D008857 1.3e-09 68.2 109 37.6
PRCOL_00001479 Prasinoderma coloniale HOM05D006979 ORTHO05D008857 8.6e-09 65.5 139 33.1
Pp3c5_8450 Physcomitrium patens HOM05D006655 ORTHO05D030199 2.5e-08 63.9 240 26.7
CiPaw.09G194500 Carya illinoinensis HOM05D003730 ORTHO05D004458 6.1e-07 59.3 255 25.9
Cpa.g.sc84.14 Carica papaya HOM05D006655 ORTHO05D007986 8.0e-07 58.9 246 26.4
Mapoly0030s0154 Marchantia polymorpha HOM05D006979 ORTHO05D008857 1.4e-06 58.2 51 47.1
MD03G1169200 Malus domestica HOM05D006655 ORTHO05D007986 2.3e-06 57.4 246 25.6
Sp4g20020 Schrenkiella parvula HOM05D003730 ORTHO05D004458 4.0e-06 56.6 250 25.6
BcaC02g07503 Brassica carinata HOM05D003730 ORTHO05D004458 6.8e-06 55.8 248 24.2
Thhalv10016917m.g Eutrema salsugineum HOM05D003730 ORTHO05D004458 6.8e-06 55.8 246 25.6
BcaB02g09264 Brassica carinata HOM05D003730 ORTHO05D004458 8.9e-06 55.5 250 25.6
CARHR131920 Cardamine hirsuta HOM05D003730 ORTHO05D004458 8.9e-06 55.5 257 25.7


User provided reference genes

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