Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G4596 Papaver somniferum HOM05D005434 ORTHO05D006412 0.0e+00 1409.0 856 100.0
TAR636G0087 Trochodendron aralioides HOM05D005434 ORTHO05D006412 1.0e-120 438.7 901 41.0
TAR365G0925 Trochodendron aralioides HOM05D005434 ORTHO05D006412 7.2e-119 432.6 887 40.9
Aqoxy2G02439 Aquilegia oxysepala HOM05D005434 ORTHO05D006412 6.1e-102 376.3 912 38.2
QL12p035062 Quercus lobata HOM05D005434 ORTHO05D006412 4.6e-97 360.1 874 36.0
Atru.chr5.851 Acer truncatum HOM05D005434 ORTHO05D006412 4.0e-93 347.1 915 34.1
Dinv12078 Davidia involucrata HOM05D005434 ORTHO05D006412 2.0e-92 344.7 684 38.9
Manes.05G008100 Manihot esculenta HOM05D005434 ORTHO05D006412 4.7e-86 323.6 911 33.8
Actinidia20964 Actinidia chinensis HOM05D005434 ORTHO05D006412 3.1e-85 320.9 884 33.6
Nn3g21972 Nelumbo nucifera HOM05D005434 ORTHO05D006412 6.8e-85 319.7 1002 31.7
Potri.002G186200 Populus trichocarpa HOM05D005434 ORTHO05D006412 9.2e-82 309.3 956 31.2
MBI18_g03842_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 2.7e-81 307.8 923 32.6
CiPaw.08G081800 Carya illinoinensis HOM05D005434 ORTHO05D006412 4.6e-81 307.0 909 33.3
Rhsim02G0256300 Rhododendron simsii HOM05D005434 ORTHO05D006412 2.5e-79 301.2 877 33.1
Thecc.01G326300 Theobroma cacao HOM05D005434 ORTHO05D006412 2.4e-77 294.7 893 32.4
Potri.014G111500 Populus trichocarpa HOM05D005434 ORTHO05D006412 1.1e-74 285.8 961 30.2
MD09G1291300 Malus domestica HOM05D005434 ORTHO05D006412 5.4e-74 283.5 928 32.1
RcHm_v2.0_Chr3g0485651 Rosa chinensis HOM05D005434 ORTHO05D006412 7.8e-73 279.6 915 30.9
Sabra14G0081900 Salix brachista HOM05D005434 ORTHO05D006412 4.3e-71 273.9 927 31.3
MBI19_g04828_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 1.2e-70 272.3 906 31.7
MD17G1286100 Malus domestica HOM05D005434 ORTHO05D006412 1.6e-70 271.9 917 32.0
Duzib138G0614 Durio zibethinus HOM05D005434 ORTHO05D006412 1.5e-68 265.4 894 30.9
COL.COLO4_23119 Corchorus olitorius HOM05D005434 ORTHO05D006412 2.6e-68 264.6 890 30.8
Lj5g0001301 Lotus japonicus HOM05D005434 ORTHO05D006412 6.4e-67 260.0 908 30.6
Prupe.3G001600 Prunus persica HOM05D005434 ORTHO05D006412 3.2e-66 257.7 864 31.6
FvH4_1g26160 Fragaria vesca HOM05D005434 ORTHO05D006412 3.0e-64 251.1 930 29.4
Duzib133G0025 Durio zibethinus HOM05D005434 ORTHO05D006412 1.9e-63 248.4 854 30.6
Haze_05156 Corylus avellana HOM05D005434 ORTHO05D006412 2.5e-63 248.1 848 30.5
FAN19G2204 Fragaria x ananassa HOM05D005434 ORTHO05D006412 9.6e-63 246.1 930 29.4
Psat6g158560 Pisum sativum HOM05D005434 ORTHO05D006412 1.3e-62 245.7 879 29.7
Glyma.02G007100 Glycine max HOM05D005434 ORTHO05D006412 1.6e-62 245.4 895 30.6
Gorai.001G148200 Gossypium raimondii HOM05D005434 ORTHO05D006412 1.6e-62 245.4 895 30.9
Gohir.A07G131800 Gossypium hirsutum HOM05D005434 ORTHO05D006412 9.0e-61 239.6 891 30.8
Sed0005889 Sechium edule HOM05D005434 ORTHO05D006412 2.6e-60 238.0 898 29.5
ClCG02G017720 Citrullus lanatus HOM05D005434 ORTHO05D006412 3.4e-60 237.7 891 30.1
Sed0026347 Sechium edule HOM05D005434 ORTHO05D006412 7.6e-60 236.5 902 29.9
Gohir.A11G105400 Gossypium hirsutum HOM05D005434 ORTHO05D006412 2.2e-59 235.0 933 28.7
FAN23G2884 Fragaria x ananassa HOM05D005434 ORTHO05D006412 3.8e-59 234.2 960 29.0
Ca_10237_v3 Cicer arietinum L. HOM05D005434 ORTHO05D006412 1.6e-57 228.8 704 31.4
TPR.G3083 Trifolium pratense HOM05D005434 ORTHO05D006412 1.6e-57 228.8 881 30.0
Gorai.007G117900 Gossypium raimondii HOM05D005434 ORTHO05D006412 2.1e-57 228.4 922 28.5
Phvul.007G208600 Phaseolus vulgaris HOM05D005434 ORTHO05D006412 3.5e-57 227.6 908 29.8
CsaV3_6G012840 Cucumis sativus L. HOM05D005434 ORTHO05D006412 7.9e-57 226.5 899 29.6
Gohir.D11G110300 Gossypium hirsutum HOM05D005434 ORTHO05D006412 2.3e-56 224.9 927 28.7
Glyma.10G138700 Glycine max HOM05D005434 ORTHO05D006412 3.0e-56 224.6 900 29.8
PGR142G2929 Punica granatum HOM05D005434 ORTHO05D006412 3.0e-56 224.6 1001 27.5
TWI14G0253 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 1.9e-55 221.9 924 30.0
Medtr1g085710 Medicago truncatula HOM05D005434 ORTHO05D006412 5.6e-55 220.3 691 31.3
VMungo0720G1215 Vigna mungo HOM05D005434 ORTHO05D006412 1.6e-54 218.8 682 31.8
FAN26G2209 Fragaria x ananassa HOM05D005434 ORTHO05D006412 2.8e-54 218.0 869 28.0
DCAR_002941 Daucus carota HOM05D005434 ORTHO05D006412 8.4e-51 206.5 871 28.8
MELO3C013628.2 Cucumis melo HOM05D005434 ORTHO05D006412 1.4e-50 205.7 892 29.9
Lj1A7G43 Lonicera japonica HOM05D005434 ORTHO05D006412 4.2e-50 204.1 229 50.2
Peaxi162Scf00309g00625 Petunia axillaris HOM05D005434 ORTHO05D006412 1.6e-49 202.2 929 27.8
Lalb_Chr02g0147201 Lupinus albus HOM05D005434 ORTHO05D006412 1.3e-48 199.1 211 52.6
CAN.G179.30 Capsicum annuum HOM05D005434 ORTHO05D006412 8.7e-48 196.4 878 28.1
Eucgr.K00557 Eucalyptus grandis HOM05D005434 ORTHO05D006412 1.1e-47 196.1 886 27.8
PGSC0003DMG400001122 Solanum tuberosum HOM05D005434 ORTHO05D006412 4.3e-47 194.1 877 27.3
Cc01_g21750 Coffea canephora HOM05D005434 ORTHO05D006412 2.8e-46 191.4 894 27.2
DCAR_005712 Daucus carota HOM05D005434 ORTHO05D006412 2.8e-46 191.4 924 27.2
Sp4g28980 Schrenkiella parvula HOM05D005434 ORTHO05D006412 1.1e-45 189.5 712 28.5
AT2G46980 Arabidopsis thaliana HOM05D005434 ORTHO05D006412 4.0e-45 187.6 910 27.8
arahy.Tifrunner.gnm1.ann1.G6BN46 Arachis hypogaea HOM05D005434 ORTHO05D006412 1.5e-44 185.7 920 27.0
Gohir.D07G136100 Gossypium hirsutum HOM05D005434 ORTHO05D006412 2.0e-44 185.3 842 29.3
CARHR142350 Cardamine hirsuta HOM05D005434 ORTHO05D006412 2.6e-44 184.9 882 28.3
Sopen01g030590 Solanum pennellii HOM05D005434 ORTHO05D006412 2.6e-44 184.9 908 26.2
Solyc01g079080.3 Solanum lycopersicum HOM05D005434 ORTHO05D006412 2.9e-43 181.4 910 26.6
BraA05t19085Z Brassica rapa HOM05D005434 ORTHO05D006412 4.9e-43 180.6 890 27.1
CANSAT25G2989 Cannabis sativa HOM05D005434 ORTHO05D006412 6.5e-43 180.3 635 30.1
Carub.0004s2971 Capsella rubella HOM05D005434 ORTHO05D006412 9.3e-42 176.4 695 29.2
ECA247G2130 Erigeron canadensis HOM05D005434 ORTHO05D008082 1.6e-41 175.6 884 27.0
Thhalv10001318m.g Eutrema salsugineum HOM05D005434 ORTHO05D006412 4.6e-41 174.1 882 28.3
FAN28G1136 Fragaria x ananassa HOM05D005434 ORTHO05D006412 4.6e-41 174.1 1002 26.4
C04p00990 Brassica napus HOM05D005434 ORTHO05D006412 1.0e-40 172.9 701 29.5
BcaC02g12619 Brassica carinata HOM05D005434 ORTHO05D006412 1.3e-40 172.6 681 28.3
Migut.D00008 Erythranthe guttata HOM05D005434 ORTHO05D006412 2.3e-40 171.8 892 26.5
AL4G46460 Arabidopsis lyrata HOM05D005434 ORTHO05D006412 3.0e-40 171.4 676 28.3
SHI34042 Sapria himalayana HOM05D005434 ORTHO05D006412 3.9e-40 171.0 878 27.3
Lsat_1_v5_gn_9_7120 Lactuca sativa HOM05D005434 ORTHO05D006412 8.7e-40 169.9 248 39.9
GSVIVG01028239001 Vitis vinifera HOM05D005434 ORTHO05D006412 1.9e-39 168.7 135 64.4
Cpa.g.sc57.27 Carica papaya HOM05D005434 ORTHO05D006412 4.3e-39 167.5 808 27.5
Oeu052591.1 Olea europaea HOM05D005434 ORTHO05D006412 3.8e-35 154.5 783 26.9
CiPaw.07G126400 Carya illinoinensis HOM05D005434 ORTHO05D006412 8.5e-35 153.3 140 56.4
SGA_v2.0_scaffold310G48189 Striga asiatica HOM05D005434 ORTHO05D006412 9.4e-34 149.8 182 47.8
Os10g0405500 Oryza sativa ssp. japonica HOM05D005434 ORTHO05D006412 1.2e-33 149.4 193 44.0
BcaC02g12826 Brassica carinata HOM05D005434 ORTHO05D006412 4.6e-33 147.5 887 26.4
BolC4t21751H Brassica oleracea HOM05D005434 ORTHO05D006412 1.4e-32 146.0 656 27.6
Aa31LG1G28350 Aethionema arabicum HOM05D005434 ORTHO05D006412 6.7e-32 143.7 902 25.6
AUR62011691 Chenopodium quinoa HOM05D005434 ORTHO05D006412 6.7e-32 143.7 669 28.3
Sc17g0000070 Simmondsia chinensis HOM05D005434 ORTHO05D006412 6.7e-32 143.7 683 29.3
Nitab4.5_0000222g0380 Nicotiana tabacum HOM05D005434 ORTHO05D006412 1.1e-31 142.9 903 26.7
Sc17g0000050 Simmondsia chinensis HOM05D005434 ORTHO05D006412 2.0e-31 142.1 172 48.3
CDE02G0039 Ceratophyllum demersum HOM05D005434 ORTHO05D006412 7.4e-31 140.2 162 48.8
Dinv33178 Davidia involucrata HOM05D005434 ORTHO05D006412 1.8e-29 135.6 107 68.2
EL10Ac4g10377 Beta vulgaris HOM05D005434 ORTHO05D006412 1.2e-28 132.9 677 28.2
CSS0010810 Camellia sinensis var. sinensis HOM05D005434 ORTHO05D006412 3.4e-28 131.3 596 29.9
Ciclev10019510m.g Citrus clementina HOM05D005434 ORTHO05D006412 1.3e-27 129.4 605 27.9
AUR62024551 Chenopodium quinoa HOM05D005434 ORTHO05D006412 1.7e-27 129.0 646 27.9
HPP92_011320 Vanilla planifolia HOM05D005434 ORTHO05D006412 1.7e-27 129.0 722 26.3
A05p00820 Brassica napus HOM05D005434 ORTHO05D006412 1.2e-25 122.9 655 26.9
Nitab4.5_0003092g0060 Nicotiana tabacum HOM05D005434 ORTHO05D006412 2.7e-25 121.7 937 25.3
Ciclev10023478m.g Citrus clementina HOM05D005434 ORTHO05D006412 1.8e-24 119.0 99 62.6
Zm00001eb233800 Zea mays HOM05D005434 ORTHO05D006412 8.8e-24 116.7 702 25.1
Dinv33176 Davidia involucrata HOM05D005434 ORTHO05D006412 3.3e-23 114.8 497 29.8
BcaB07g33880 Brassica carinata HOM05D005434 ORTHO05D006412 5.9e-20 104.0 153 37.9
SGA_v2.0_scaffold417G51248 Striga asiatica HOM05D005434 ORTHO05D006412 7.7e-20 103.6 739 24.9
GSVIVG01028240001 Vitis vinifera HOM05D005434 ORTHO05D006412 2.2e-19 102.1 602 28.6
unitig_62.g23901 Utricularia gibba HOM05D005434 ORTHO05D006412 6.5e-19 100.5 152 38.2
CiPaw.07G126300 Carya illinoinensis HOM05D005434 ORTHO05D006412 1.4e-18 99.4 643 26.6
TWI23G0760 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 8.0e-17 93.6 608 27.3
SEGI_30180 Sequoiadendron giganteum HOM05D005434 ORTHO05D006412 3.0e-16 91.7 168 32.1
Lj1A7T44 Lonicera japonica HOM05D005434 ORTHO05D006412 6.7e-16 90.5 504 24.8
Actinidia25873 Actinidia chinensis HOM05D005434 ORTHO05D006412 3.3e-15 88.2 660 25.2
Pp3c2_29340 Physcomitrium patens HOM05D022252 ORTHO05D006412 1.4e-13 82.8 186 26.9
Lalb_Chr02g0147191 Lupinus albus HOM05D005434 ORTHO05D006412 2.4e-13 82.0 637 25.7
CDE08G1326 Ceratophyllum demersum HOM05D005434 ORTHO05D006412 1.0e-11 76.6 72 55.6
BolC3t15425H Brassica oleracea HOM05D005434 ORTHO05D006412 3.8e-11 74.7 84 42.9
C03p30750 Brassica napus HOM05D005434 ORTHO05D011138 6.5e-11 73.9 81 42.0
Mapoly0021s0152 Marchantia polymorpha HOM05D022252 ORTHO05D006412 1.5e-10 72.8 170 27.1
arahy.Tifrunner.gnm1.ann1.9BA1LG Arachis hypogaea HOM05D005434 ORTHO05D006412 1.2e-09 69.7 704 24.3
SMO367G0284 Selaginella moellendorffii HOM05D022252 ORTHO05D006993 4.7e-09 67.8 173 27.2
PGSC0003DMG400023095 Solanum tuberosum HOM05D005434 ORTHO05D007977 1.8e-08 65.9 81 42.0
AagrBONN_evm.TU.Sc2ySwM_344.3613 Anthoceros agrestis HOM05D022252 ORTHO05D006412 1.2e-07 63.2 194 25.3
BcaC01g05050 Brassica carinata HOM05D005434 ORTHO05D006412 1.7e-06 59.3 77 40.3


User provided reference genes

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