Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G4511 Papaver somniferum HOM05D006545 ORTHO05D007985 1.2e-31 139.4 79 100.0
PSO210G2413 Papaver somniferum HOM05D006545 ORTHO05D007985 1.7e-30 135.6 79 94.9
PGSC0003DMG400000279 Solanum tuberosum HOM05D006545 ORTHO05D007985 2.6e-23 111.7 79 78.5
Nitab4.5_0008523g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 3.4e-23 111.3 79 78.5
unitig_85.g27258 Utricularia gibba HOM05D006545 ORTHO05D007985 3.4e-23 111.3 79 78.5
Lsat_1_v5_gn_7_37040 Lactuca sativa HOM05D006545 ORTHO05D007985 4.4e-23 110.9 76 76.3
vmacro06292 Vaccinium macrocarpon HOM05D006545 ORTHO05D007985 4.4e-23 110.9 79 78.5
Actinidia19138 Actinidia chinensis HOM05D006545 ORTHO05D007985 5.8e-23 110.5 79 78.5
QL02p062521 Quercus lobata HOM05D006545 ORTHO05D007985 5.8e-23 110.5 73 80.8
Solyc12g008860.3 Solanum lycopersicum HOM05D006545 ORTHO05D007985 5.8e-23 110.5 79 77.2
Sopen12g003790 Solanum pennellii HOM05D006545 ORTHO05D007985 5.8e-23 110.5 79 77.2
MSTRG.10562 Avicennia marina HOM05D006545 ORTHO05D007985 9.9e-23 109.8 79 75.9
ECA240G1755 Erigeron canadensis HOM05D006545 ORTHO05D007985 9.9e-23 109.8 76 72.4
Migut.L01494 Erythranthe guttata HOM05D006545 ORTHO05D007985 9.9e-23 109.8 79 74.7
Actinidia29903 Actinidia chinensis HOM05D000085 ORTHO05D001460 1.3e-22 109.4 79 78.5
DCAR_028856 Daucus carota HOM05D006545 ORTHO05D007985 1.3e-22 109.4 76 78.9
DCAR_032235 Daucus carota HOM05D006545 ORTHO05D007985 1.3e-22 109.4 76 78.9
Nitab4.5_0000540g0270 Nicotiana tabacum HOM05D006545 ORTHO05D007985 1.7e-22 109.0 79 77.2
GSVIVG01015199001 Vitis vinifera HOM05D006545 ORTHO05D007985 1.7e-22 109.0 79 72.2
Cc06_g11430 Coffea canephora HOM05D006545 ORTHO05D007985 2.2e-22 108.6 79 75.9
Dinv42321 Davidia involucrata HOM05D006545 ORTHO05D007985 2.2e-22 108.6 79 75.9
Prupe.7G209400 Prunus persica HOM05D006545 ORTHO05D007985 2.9e-22 108.2 74 81.1
Psat4g015120 Pisum sativum HOM05D006545 ORTHO05D007985 3.8e-22 107.8 76 77.6
RcHm_v2.0_Chr2g0093401 Rosa chinensis HOM05D006545 ORTHO05D007985 3.8e-22 107.8 74 78.4
Sc18g0002090 Simmondsia chinensis HOM05D000085 ORTHO05D001460 3.8e-22 107.8 78 73.1
CiPaw.04G149100 Carya illinoinensis HOM05D006545 ORTHO05D007985 4.9e-22 107.5 74 78.4
Dinv36770 Davidia involucrata HOM05D006545 ORTHO05D007985 4.9e-22 107.5 79 75.9
Potri.004G215200 Populus trichocarpa HOM05D006545 ORTHO05D007985 4.9e-22 107.5 79 73.4
THA.LOC104820022 Tarenaya hassleriana HOM05D006545 ORTHO05D007985 4.9e-22 107.5 76 76.3
TAR383G1000 Trochodendron aralioides HOM05D006545 ORTHO05D007985 4.9e-22 107.5 78 74.4
THA.LOC104814622 Tarenaya hassleriana HOM05D006545 ORTHO05D007985 6.4e-22 107.1 74 77.0
EL10Ac8g19212 Beta vulgaris HOM05D006545 ORTHO05D007985 1.1e-21 106.3 79 72.2
FvH4_1g07510 Fragaria vesca HOM05D006545 ORTHO05D007985 1.1e-21 106.3 74 77.0
FAN19G0384 Fragaria x ananassa HOM05D006545 ORTHO05D007985 1.1e-21 106.3 74 77.0
FAN23G2021 Fragaria x ananassa HOM05D006545 ORTHO05D007985 1.1e-21 106.3 74 77.0
FAN26G0590 Fragaria x ananassa HOM05D006545 ORTHO05D007985 1.1e-21 106.3 74 77.0
Ca_21279_v3 Cicer arietinum L. HOM05D005251 ORTHO05D006680 1.4e-21 105.9 74 78.4
MELO3C015473.2 Cucumis melo HOM05D006545 ORTHO05D007985 1.4e-21 105.9 74 74.3
CsaV3_1G040450 Cucumis sativus L. HOM05D006545 ORTHO05D007985 1.4e-21 105.9 74 74.3
Duzib150G0099 Durio zibethinus HOM05D006545 ORTHO05D007985 1.9e-21 105.5 79 72.2
Nn8g38862 Nelumbo nucifera HOM05D006545 ORTHO05D007985 1.9e-21 105.5 79 73.4
PGR102G1056 Punica granatum HOM05D006545 ORTHO05D007985 1.9e-21 105.5 74 77.0
TWI34G0024 Tripterygium wilfordii HOM05D006545 ORTHO05D007985 2.4e-21 105.1 74 75.7
Cfa003081 Carpinus fangiana HOM05D000085 ORTHO05D001460 3.2e-21 104.8 74 74.3
HanXRQChr12g0363181 Helianthus annuus HOM05D006545 ORTHO05D007985 3.2e-21 104.8 79 72.2
Atru.chr7.1592 Acer truncatum HOM05D006545 ORTHO05D007985 4.2e-21 104.4 74 74.3
ATR0749G052 Amborella trichopoda HOM05D006545 ORTHO05D007985 4.2e-21 104.4 79 70.9
Aqoxy7G01208 Aquilegia oxysepala HOM05D006545 ORTHO05D007985 4.2e-21 104.4 78 75.6
ClCG03G015590 Citrullus lanatus HOM05D006545 ORTHO05D007985 4.2e-21 104.4 74 71.6
Eucgr.C00895 Eucalyptus grandis HOM05D006545 ORTHO05D007985 4.2e-21 104.4 74 70.3
TWI63G0169 Tripterygium wilfordii HOM05D006545 ORTHO05D007985 4.2e-21 104.4 74 75.7
Ah.09g228260 Amaranthus hybridus HOM05D006545 ORTHO05D007985 5.4e-21 104.0 79 70.9
AUR62033964 Chenopodium quinoa HOM05D006545 ORTHO05D007985 5.4e-21 104.0 78 73.1
AT4G29735 Arabidopsis thaliana HOM05D006545 ORTHO05D007985 7.1e-21 103.6 76 75.0
CANSAT56G1499 Cannabis sativa HOM05D006545 ORTHO05D007985 7.1e-21 103.6 74 74.3
CANSAT56G4473 Cannabis sativa HOM05D006545 ORTHO05D007985 7.1e-21 103.6 74 74.3
Ciclev10010087m.g Citrus clementina HOM05D006545 ORTHO05D007985 7.1e-21 103.6 74 77.0
Manes.16G101800 Manihot esculenta HOM05D006545 ORTHO05D007985 7.1e-21 103.6 76 73.7
Duzib168G1224 Durio zibethinus HOM05D006545 ORTHO05D007985 9.3e-21 103.2 79 69.6
MD02G1079700 Malus domestica HOM05D006545 ORTHO05D007985 9.3e-21 103.2 74 74.3
PSO832G3375 Papaver somniferum HOM05D006545 ORTHO05D007985 9.3e-21 103.2 79 69.6
Potri.006G146800 Populus trichocarpa HOM05D006545 ORTHO05D007985 9.3e-21 103.2 79 69.6
Sabra06G0115900 Salix brachista HOM05D006545 ORTHO05D007985 9.3e-21 103.2 79 70.9
arahy.Tifrunner.gnm1.ann1.MQ59WG Arachis hypogaea HOM05D000085 ORTHO05D001460 1.2e-20 102.8 74 73.0
CiPaw.03G215100 Carya illinoinensis HOM05D006545 ORTHO05D007985 1.2e-20 102.8 74 75.7
AUR62029070 Chenopodium quinoa HOM05D006545 ORTHO05D007985 1.2e-20 102.8 78 71.8
Gohir.A13G193400 Gossypium hirsutum HOM05D006545 ORTHO05D007985 1.2e-20 102.8 79 72.2
Zm00001eb383910 Zea mays HOM05D006545 ORTHO05D007985 1.2e-20 102.8 76 71.1
AL7G22570 Arabidopsis lyrata HOM05D006545 ORTHO05D007985 1.6e-20 102.4 76 73.7
arahy.Tifrunner.gnm1.ann1.CH1R66 Arachis hypogaea HOM05D006545 ORTHO05D007985 1.6e-20 102.4 74 73.0
arahy.Tifrunner.gnm1.ann1.S1CX09 Arachis hypogaea HOM05D006545 ORTHO05D007985 1.6e-20 102.4 74 73.0
Carub.0007s1077 Capsella rubella HOM05D006545 ORTHO05D007985 1.6e-20 102.4 76 73.7
Thhalv10026717m.g Eutrema salsugineum HOM05D006545 ORTHO05D007985 1.6e-20 102.4 76 72.4
Medtr4g126270 Medicago truncatula HOM05D000085 ORTHO05D001460 1.6e-20 102.4 74 74.3
Os06g0567000 Oryza sativa ssp. japonica HOM05D006545 ORTHO05D007985 1.6e-20 102.4 76 69.7
PSO063G6244 Papaver somniferum HOM05D006545 ORTHO05D007985 1.6e-20 102.4 79 69.6
CDE06G0764 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 2.1e-20 102.1 79 72.2
CDE07G1614 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 2.1e-20 102.1 79 72.2
Gohir.A05G030100 Gossypium hirsutum HOM05D006545 ORTHO05D007985 2.1e-20 102.1 79 69.6
Gohir.D05G031500 Gossypium hirsutum HOM05D006545 ORTHO05D007985 2.1e-20 102.1 79 69.6
Gorai.009G031700 Gossypium raimondii HOM05D006545 ORTHO05D007985 2.1e-20 102.1 79 69.6
Manes.03G034000 Manihot esculenta HOM05D006545 ORTHO05D007985 2.1e-20 102.1 76 72.4
Thecc.09G088900 Theobroma cacao HOM05D006545 ORTHO05D007985 2.1e-20 102.1 79 69.6
Aa31LG2G20830 Aethionema arabicum HOM05D006545 ORTHO05D007985 2.7e-20 101.7 76 71.1
Lj4g0002489 Lotus japonicus HOM05D006545 ORTHO05D007985 2.7e-20 101.7 74 74.3
Sp7g27510 Schrenkiella parvula HOM05D006545 ORTHO05D007985 2.7e-20 101.7 76 72.4
CARHR237610 Cardamine hirsuta HOM05D006545 ORTHO05D007985 3.5e-20 101.3 76 72.4
BcaNung00485 Brassica carinata HOM05D006545 ORTHO05D007985 4.6e-20 100.9 72 76.4
Gohir.D13G199200 Gossypium hirsutum HOM05D006545 ORTHO05D007985 4.6e-20 100.9 79 70.9
Lalb_Chr13g0299701 Lupinus albus HOM05D006545 ORTHO05D007985 7.8e-20 100.1 74 73.0
TPR.G9474 Trifolium pratense HOM05D000085 ORTHO05D001460 7.8e-20 100.1 71 76.1
Lalb_Chr07g0180851 Lupinus albus HOM05D006545 ORTHO05D007985 1.0e-19 99.8 74 74.3
unitig_699.g19296 Utricularia gibba HOM05D006545 ORTHO05D007985 1.0e-19 99.8 79 68.4
C03p89150 Brassica napus HOM05D006545 ORTHO05D007985 1.3e-19 99.4 76 71.1
Glyma.13G104200 Glycine max HOM05D006545 ORTHO05D007985 1.3e-19 99.4 74 73.0
Glyma.17G054900 Glycine max HOM05D006545 ORTHO05D007985 1.3e-19 99.4 74 73.0
MBI04_g31162_MAGBIO Magnolia biondii HOM05D006545 ORTHO05D007985 1.3e-19 99.4 79 69.6
Phvul.003G136800 Phaseolus vulgaris HOM05D006545 ORTHO05D007985 1.3e-19 99.4 74 71.6
A03p59030 Brassica napus HOM05D006545 ORTHO05D007985 1.7e-19 99.0 72 73.6
Nitab4.5_0006552g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 1.7e-19 99.0 75 73.3
Gorai.013G227700 Gossypium raimondii HOM05D006545 ORTHO05D007985 2.3e-19 98.6 79 69.6
BcaC01g01182 Brassica carinata HOM05D006545 ORTHO05D007985 3.9e-19 97.8 76 69.7
Zm00001eb277360 Zea mays HOM05D006545 ORTHO05D007985 3.9e-19 97.8 75 66.7
MD15G1207400 Malus domestica HOM05D006545 ORTHO05D007985 1.5e-18 95.9 74 64.9
Sed0026852 Sechium edule HOM05D006545 ORTHO05D007985 1.5e-18 95.9 74 68.9
Nitab4.5_0004526g0070 Nicotiana tabacum HOM05D006545 ORTHO05D007985 5.6e-18 94.0 64 79.7
BcaC09g51752 Brassica carinata HOM05D006545 ORTHO05D007985 1.3e-17 92.8 72 72.2
A01p08390 Brassica napus HOM05D000125 ORTHO05D000120 1.6e-17 92.4 72 70.8
BraA01t00787Z Brassica rapa HOM05D000125 ORTHO05D000120 1.6e-17 92.4 72 70.8
C07p57080 Brassica napus HOM05D006545 ORTHO05D007985 5.3e-16 87.4 64 73.4
BraA03t14963Z Brassica rapa HOM05D006545 ORTHO05D007985 5.3e-16 87.4 94 57.4
SalBow5G5008 Salvia bowleyana HOM05D006545 ORTHO05D007985 5.3e-16 87.4 62 75.8
Mapoly0003s0235 Marchantia polymorpha HOM05D006545 ORTHO05D007985 2.0e-15 85.5 79 58.2
Nitab4.5_0004223g0010 Nicotiana tabacum HOM05D006545 ORTHO05D007985 3.4e-15 84.7 63 71.4
BolC7t46179H Brassica oleracea HOM05D006545 ORTHO05D007985 5.8e-15 84.0 98 54.1
SMO361G0088 Selaginella moellendorffii HOM05D006545 ORTHO05D007985 7.6e-15 83.6 73 58.9
HanXRQChr12g0377121 Helianthus annuus HOM05D006545 ORTHO05D007985 9.9e-15 83.2 56 76.8
Pp3c11_23220 Physcomitrium patens HOM05D006545 ORTHO05D007985 9.9e-15 83.2 72 63.9
BcaC09g52224 Brassica carinata HOM05D006545 ORTHO05D007985 1.3e-14 82.8 64 70.3
TAR624G0377 Trochodendron aralioides HOM05D002302 ORTHO05D002728 4.9e-14 80.9 68 64.7
HPP92_008778 Vanilla planifolia HOM05D006545 ORTHO05D007985 6.4e-14 80.5 58 70.7
FAN26G2289 Fragaria x ananassa HOM05D006545 ORTHO05D007985 8.4e-14 80.1 60 68.3
C01p09580 Brassica napus HOM05D000125 ORTHO05D007985 1.4e-13 79.3 63 74.6
COL.COLO4_18197 Corchorus olitorius HOM05D002302 ORTHO05D002728 3.2e-13 78.2 68 63.2
C01p09720 Brassica napus HOM05D006545 ORTHO05D007985 4.2e-13 77.8 94 53.2
Nitab4.5_0000095g0160 Nicotiana tabacum HOM05D006545 ORTHO05D007985 3.5e-12 74.7 74 58.1
Rhsim03G0232100 Rhododendron simsii HOM05D000004 ORTHO05D007985 3.9e-11 71.2 47 83.0
A08p19550 Brassica napus HOM05D006545 ORTHO05D007985 1.3e-09 66.2 46 78.3
C01p09620 Brassica napus HOM05D006545 ORTHO05D007985 6.2e-09 63.9 96 47.9
Lj7C676T8 Lonicera japonica HOM05D006545 ORTHO05D007985 4.0e-08 61.2 37 86.5
BcaB03g12615 Brassica carinata HOM05D006545 ORTHO05D007985 2.9e-06 55.1 48 58.3


User provided reference genes

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